Phycodurus eques (leafy seadragon): 133403511
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Entry
133403511 CDS
T09682
Name
(RefSeq) ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133403511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133403511
03009 Ribosome biogenesis [BR:
pee03009
]
133403511
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133403511
Spliceosome [BR:
pee03041
]
Complex A
U2 snRNP components
U2 related factors
133403511
Complex B
133403511
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
133403511
Ribosome biogenesis [BR:
pee03009
]
Eukaryotic type
90S particles
Helicases
133403511
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_25
nSTAND3
AAA_29
Atrophin-1
AAA_7
RSB_motif
Motif
Other DBs
NCBI-GeneID:
133403511
NCBI-ProteinID:
XP_061534371
LinkDB
All DBs
Position
6:7379710..7401714
Genome browser
AA seq
763 aa
AA seq
DB search
MSKRHRLDLGDDYSSKKRSEGRDRDSDRDRGDHSRDRDRDRDRDRDRDRDRERDLKSSSA
PPKIMPAVIPMPQLKQMAMQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKENFTDIITR
HQSFVLVGETGSGKTTQIPQWCVDMVRSIPGPKRAVACTQPRRVAAMSVAQRVADEMDVM
LGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDIL
MGVLKEVVRQRADLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYL
EAAIRTVIQIHMCEEDEGDCLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTL
PPQQQQRIFEPPPPRKANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR
VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVL
QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA
KMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYH
AFKQNHEANQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRA
LCTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTD
IKPEWLVKIAPQYYEMSNFPQCEAKRQLERIVAKLESKEYSQY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagacatcgtttggatttgggcgatgactactccagtaagaagaggtctgaa
gggcgtgacagagactcggatcgagaccggggggatcattccagagacagagacagagac
cgggatcgagaccgcgacagggaccgagaccgcgaaagagatctgaagtcttcaagcgca
ccacctaaaatcatgccggctgtcatccccatgcctcagctgaagcagatggccatgcag
cagcagatcaatccgttcaccaacctgccgcacacgccccgctattatgaaattctgaag
aaaaggttacagcttcccgtgtgggagtacaaggaaaacttcactgacatcattacacgc
catcagagctttgtccttgtaggagagactggctctgggaagacgacacaaatccctcag
tggtgtgtcgacatggtgaggagcattcctggtccgaagagggcggttgcctgtactcag
ccaaggagagtggcagccatgagcgtggcgcaaagagtggcagatgaaatggacgtgatg
ctcggacaggaagtgggctactccatccgatttgaagactgtagttctgccaaaacaata
ctgaagtacatgacagatggtatgttgttgagagaggcgatgaatgaccctcttctggag
cgatatggagtgattattctggacgaggcccacgagcgaacactagccaccgatattcta
atgggagtgctgaaggaggtggtgcgtcaacgagcagatctaaaggtgatagttatgagc
gccacactggatgcagggaagttccaggtgtactttgacagttgccccctgctgacaatt
cctggccgcacgcacccggtagagatcttctacacgcccgagccggagcgagactacctc
gaagccgccattcgcacagtcatccagattcacatgtgtgaggaagatgagggggattgt
cttctcttcctcactggtcaagaggaaattgatgaagcgtgcaaacggatcaagcgtgag
gtggatgaccttgggcctgaagttggagacatcaaaatcattccactgtattcaacgttg
ccaccacagcagcagcaaaggatctttgagccaccacctccacggaaagctaatggtgca
ataggaagaaaggttgtggtgtcaacaaatattgctgagacctctctaacaattgacggt
gtggtctttgtcattgatcctggctttgccaaacagaaggtatacaaccctcgcatcaga
gtggaatcgctgctggtcaccgccatcagtaaagcgtctgcccagcagagggcaggacga
gccggcagaacccggccagggaaatgtttccgcctgtatacagaaaaagcctacaaaaca
gagatgcaggataacacatacccagaaatcctgcgatccaacttggggtctgtggtgctg
caattgaagaagttgggcatcgacgaccttgtgcactttgacttcatggatccaccagct
cctgagaccctgatgagagccttggagctactcaactacttggccgcgctcaacgacgat
ggcgacctgaccgagctgggctctatgatggcagagttccccctcgacccccagttggcc
aagatggtcatcgcgagctgcgagttcaactgctccaacgagatcctttccatcactgcc
atgctgtcagtcccacagtgttttgtgcgccccacggaggcaaagaaggctgccgatgag
tccaagatgaggttcgcccacatcgacggcgaccacttgactctactcaatgtctaccat
gccttcaagcaaaatcacgaggcgaaccagtggtgctatgacaactttgtcaactatcgt
tcgctgatgtccgccgacaacgtacggcagcagctgtccaggattatggaccgcttcaac
ctgccccgccggagcacagagtttaccagtcgagactactacatcaacatccgcagggca
ctatgcaccgggttcttcatgcaggtggcccatctggaacgaaccggtcattacctcaca
gttaaagacaaccaagtggtccaactgcacccatccacagttttggaccacaagcccgaa
tgggtgctctacaacgaatttgtcctcaccaccaaaaactacattcgtacttgcacagac
atcaaaccagagtggctggtgaagatcgccccccagtactatgagatgagtaacttcccg
caatgtgaagctaaacgacagctggagcgaatcgttgccaaactcgagagcaaagagtat
tcccagtactaa
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