Phycodurus eques (leafy seadragon): 133403638
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Entry
133403638 CDS
T09682
Name
(RefSeq) embryonic polyadenylate-binding protein-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03015
mRNA surveillance pathway
pee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133403638
09123 Folding, sorting and degradation
03018 RNA degradation
133403638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133403638
03041 Spliceosome [BR:
pee03041
]
133403638
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133403638
mRNA cycle factors
Stress granule specific factors
133403638
Spliceosome [BR:
pee03041
]
Complex C
Other components
Complex C specific factors
133403638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_Nup35
RRM_5
RBD_DEAH11
RRM_occluded
RRM_3
RBD_RDR6
DehI
DUF7373
Motif
Other DBs
NCBI-GeneID:
133403638
NCBI-ProteinID:
XP_061534676
LinkDB
All DBs
Position
1:13819892..13844304
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AA seq
624 aa
AA seq
DB search
MMNSSGPTYPLASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINF
QQPADAECALDTMNYDVLKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDDSIDNKALYDTF
SAFGNILSCKVVCDERGSKGYGFVHFETQEAANRAINTMNGMLLNDRKVFVGHFKSRKDR
EQEFGTKAMKFTNVYIKNFGEDYTDDNLKDVFSAFGKTLSVRVMKDERGHSRGFGFVNYA
NHEDAQKAVDEMNGKELNGKFLYVGRAQKRLERQGELKRRFDQIKQDRIQRYQGVNLYVK
NLDDSIDDERLRKEFSPYGTITSAKVMTDGSQSKGFGFVCFSSPEEATKAVTEMNGRIIA
TKPLYVALAQRREERKAILTNKYMQRLATLRSMTSPIIDSYHQTGYYMTVPQASTHTFYE
HNAISNMRSVPRWAGQSPRVQGPYSTQYVGGSAPRRGSTPIATVRQASTQAPRIASSTQK
TNNIGTQTAGGRADLSGVSRSHFKYSSAVRNPQQVMPVPMTRLQVVPAPVMEQPVHAQSI
EPLTASMLAGAPLVDQKQLFGERLYPLIHALHPNLAGKITGMLLEIDNSELLHMLESPES
LHAKVDEAIAVLQAHQAKVSGPKK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacagcagcggaccgacctatcccctcgcctctttgtatgtcggggacctgcat
ccagatgttacagaggccatgctataccagaagttttctcctgctggcccaatcatgtca
atccgtgtgtgtcgtgatattataacccggagatccttgggatatgcttatataaacttc
cagcaaccagcggatgctgagtgtgctttggatacaatgaactacgatgttctcaaggga
cgcccaatccgaataatgtggtctcaacgtgacccaggcctcaggaagtcaggcgtgggc
aacatctttatcaagaacatggatgattctattgacaacaaggcattatatgataccttc
tcagcctttggcaatattttgtcttgcaaggtcgtttgtgatgagagaggctcaaaaggg
tacggctttgttcactttgagactcaggaagctgcaaaccgcgccattaataccatgaac
ggaatgctgctgaatgacagaaaagtttttgttggccacttcaagtcccgcaaggatcga
gagcaggagttcggcaccaaagctatgaaattcaccaatgtctacattaaaaattttggt
gaagactacactgatgacaatctaaaagatgttttttctgcatttgggaagactcttagt
gtgcgtgtgatgaaggacgagcgaggtcattcgcgtggatttggctttgtaaactatgcc
aaccacgaggatgcgcaaaaggcagtcgatgagatgaatggtaaggaactcaacgggaag
ttcctctacgtcgggcgggctcagaagcggctggagcgtcagggagagcttaagcgcagg
tttgaccagatcaaacaggaccgaatccagcgttatcagggtgtcaatctgtatgtgaag
aacttggacgatagcatagatgatgagcgactccggaaggagttttccccctatggcacc
ataacaagtgctaaggtcatgactgatgggtcccaaagcaaaggctttggctttgtctgc
ttttcttcacctgaggaagcaacaaaagcagttactgagatgaatggaagaattattgca
actaagcccctgtatgtggcacttgcccagcgacgggaggagcgtaaagcgatcctcact
aacaagtacatgcagagactggccaccctgaggagcatgaccagtcccatcattgactcg
taccatcagactggctactacatgactgtgccacaggcttccacacacaccttctatgag
cacaatgccatcagcaacatgagatcagtgcctcgttgggcaggacagtcaccgagagtg
cagggtccatactcaacccaatatgttggcgggtctgcccctcgccgtggctccactccc
atcgccacagtgagacaagcttccactcaggctccacgtatcgccagttccacacaaaag
acaaataacatcggaacccagactgcaggtgggcgagctgacctgtccggtgtgtccagg
agtcattttaagtactcgtcggcagtgcgaaacccacagcaggtcatgcctgtacccatg
actagactccaggttgttcctgcccctgtgatggagcagccagtgcatgctcaaagcatt
gaaccactcaccgcttcaatgttggctggagcaccacttgtggaccagaagcagctcttt
ggtgagcgtctgtaccctctgatccatgctcttcacccaaacctggctggaaaaatcact
ggaatgctgctggagattgacaactctgagctgctacacatgctggagtcaccagagtcc
ctccacgccaaggtggacgaggcgattgcggtcttacaagcccaccaggccaaggtctcc
ggtccaaaaaagtga
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