Phycodurus eques (leafy seadragon): 133403674
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Entry
133403674 CDS
T09682
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133403674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133403674
03009 Ribosome biogenesis [BR:
pee03009
]
133403674
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133403674
Spliceosome [BR:
pee03041
]
Complex A
U1 snRNP components
U1 related factors
133403674
Complex B
133403674
Ribosome biogenesis [BR:
pee03009
]
Eukaryotic type
Pre-60S particles
Helicases
133403674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
133403674
NCBI-ProteinID:
XP_061534778
LinkDB
All DBs
Position
6:complement(7677600..7697163)
Genome browser
AA seq
633 aa
AA seq
DB search
MPGFSDRDRGRDRAYGGGPPRFGGGGGGRGGPPPAKFGNPGERLRKRHWNLDELPKFQKN
FYQEHPDATRRPLQEVEQYRRSKEVTVKGRECPKPIIRFHEAAFPNYVMDVIVKQNWIEP
TPIQGQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAPTR
ELAQQVQQVAAEYGRASHLKTTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKT
NLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDY
VQINIGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDEI
TRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINYD
YPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAED
RGGRGRGGRGGYKDDRRDRYSGGGWRENFGGGGYRDRDNDRGFGNGPKGGFGGKMQNGGS
YGGNGAHPSGSYGNNYSNSNGPGNFGPPSNQVGAFGNQNFQGPPQFGGMQRPAQNGMNHP
FPYTPQPPPPPQAQQPPPPPPMVPYPMPPPFSQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgccaggattttcagacagggaccgtggccgggatagagcatatggtgggggacctcct
cgttttggaggtggaggaggaggcaggggtggacctcccccggcaaagtttggcaaccct
ggtgagaggctaagaaagaggcactggaaccttgatgagcttcccaagtttcaaaaaaac
ttctaccaggaacatccagatgccacccgaagaccacttcaagaggttgagcagtacaga
cgaagcaaagaagttacagtcaaaggcagagaatgccccaaaccaattataaggttccat
gaagcggcatttccaaactatgtcatggatgtgatcgtcaaacaaaactggattgaacca
acccctattcagggtcaggggtggccagttgctctcagtggcaaagacatggttggcatt
gctcaaactggctctgggaaaactcttgcttaccttctacctgctattgtgcacatccaa
catcaacccttcctggagcatggtgatggacctatctgcttggtattggcgcctacacgt
gaactggcccagcaggtgcaacaggtcgctgctgaatacggcagggcctcccatctcaag
accacctgcatctatgggggtgcacccaaaggaccccaaattagggatctcgagagggga
gttgagatttgtatcgctaccccgggtcgtctcattgactttctggagtgtgggaaaaca
aatttacggcgttgcacctacctggtgcttgatgaggccgaccgcatgctcgatatggga
tttgaaccacagatccgcaagattgtggaccaaatacggccagaccgtcagactctgatg
tggagcgccacttggcccaaagaggttcggcagcttgcggaagacttcctgaaagactat
gtacagatcaacattggagcgcttcagctcagcgccaaccataacatcttgcagattgtt
gatgtttgcaatgacatggagaaggaggacaaactgattcgattgctggaggagataatg
agtgaaaaagagaacaagacaattatttttgtagagacgaaaaggcgctgcgatgagatc
accaggaggatgagaagggatgggtggccagcgatgggaatacatggagacaagagccag
caggagagagactgggtccttaatgagttcagatacggcaaagcaccaatcctcatcgcc
acagacgtagcctcccgaggcttagatgtggaggatgtgaaatttgtcatcaattatgac
taccctaactcctctgaggattatatccaccgcattggacgtacagcccggagtcaaaaa
acaggcacagcctacaccttcttcacccccaacaacatgaaacaggctagtgatctgatc
tctgtgctgcgtgaggccaaccaggccattaaccctaagctcatccagatggcagaggac
agaggaggtcgtggaaggggggggcgaggtggctacaaagatgaccgtcgagataggtat
tctggaggtgggtggcgtgagaactttggtggtggtggctacagggacagggacaacgat
agagggtttggaaatgggccaaagggtgggtttggaggcaagatgcaaaatgggggcagc
tatggaggcaacggtgctcatcccagtggtagctatggcaacaattatagcaacagcaat
ggcccaggtaactttggtcctccatccaatcaggtgggagccttcgggaaccaaaacttc
cagggcccccctcagtttgggggaatgcagaggcctgcccagaatggcatgaaccacccg
ttcccatacacccctcagccaccaccaccgccacaggctcaacagccaccacccccacct
ccaatggtgccctaccccatgccaccacccttttcacagtag
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