Phycodurus eques (leafy seadragon): 133403829
Help
Entry
133403829 CDS
T09682
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03030
DNA replication
pee03410
Base excision repair
pee03420
Nucleotide excision repair
pee03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133403829 (rfc1)
03410 Base excision repair
133403829 (rfc1)
03420 Nucleotide excision repair
133403829 (rfc1)
03430 Mismatch repair
133403829 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pee03032
]
133403829 (rfc1)
03400 DNA repair and recombination proteins [BR:
pee03400
]
133403829 (rfc1)
DNA replication proteins [BR:
pee03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
133403829 (rfc1)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
133403829 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
PTCB-BRCT
AAA_22
AAA_30
AAA_5
RuvB_N
Rad17
AAA_16
AAA_17
AAA_14
AAA_18
nSTAND3
AAA_19
AAA_33
BRCT_2
AAA_7
RNA_helicase
NTPase_1
Motif
Other DBs
NCBI-GeneID:
133403829
NCBI-ProteinID:
XP_061535125
LinkDB
All DBs
Position
6:complement(30729441..30747403)
Genome browser
AA seq
1133 aa
AA seq
DB search
MDIRRFFAPSAHKATTNGNIGSTKRNPLSSDEEVKKKRESKMKKQEAEVKHTRDRKKWKK
RAVIDSDSDSEERDRKSKKSPGKKQKLSKKNEPVHCVLETDSDSDSFESLKKASINKQNG
TSQKSRSSPSVKEAAKSLIKSSSVHLQIGAKCPSTPVTPKTAPPPQAKQTPTSVFDYFGN
GSIQRSDKKLVASTKRKTPVQDTDEVSDEQIARHLQMVEDAELEKQIHEDEDFGRTLAML
DAEPHAKKVRKGSDKKEDLEAFPRKRTALSRSKANRNDSTSEDVRGPSPKKNPALVKPSS
KLGMMKKRDEEQEDVTPGQAQTHLKVSPKKEPITVSCREKLQASKIGAPLKTSPTEAAST
RTDEAEKKKLNTSAYRNYLNRDGPRALGSKEIPTGADNCLEGCAFVLTGVLESLERDDTK
SLIERHGGKVTGNVSKKTTYLVRGRDSGVSKLEKAESFGTKILSEDDLLELIRTKPGKKS
KYEIAAEAESKASKTRTPPGLASKIASKASKMSPSKGNSKSPHTPSPSKTGQTTSRRAKT
TDGGTPSGRGSVRRDLGLSSSASSSAGPHPRTKSVNEEGATLLWVDKYRPCSLKAVIGQQ
GDQSCASKLLRWLQNWYKHHSGGASRPPVARFGKFGAGKDDGSGYKAALLSGPPGVGKTT
TAALVCEELGFSYVEMNASCTRSKTNLKEVVAESLNNTSIESFYKGTSQKVSTKHVLIMD
EVDGMAGNEDRGGVQELIGLIKTSKIPIICMCNDRNHQKIRSLANYCFDLRFQRPRMEQI
KSAMMSIAFKEGIKMPPPALNEIILAANQDIRQVIHNLSMWSAKDKVMTYDQCKSDAAGA
RKDLKMGPFDVCRKVFAAGEETAHMSLIDKSDLFFHDYSLAPLFVQENYLHVRPAAAGGD
VKSHLVLLSKTADAISDGDLVDRRIRSGQNWSLLPTQAIYASVIPGELMRGYMSQFPSFP
SWLGKHSSAGKHSRIIQELASHMALKTMSGGRAVNLDYLHFLRQALLSPLQKLAAEGAGR
AVRLLDDYQLVREDVDGMMEMASWGGRPDPYSKLDSKVKAAFTRAYNKEVHLTPYSLQAV
KKGRRAGGQESELGAHDAEKDGAASDDEEGDGLSADAMIKQKKTKASKKEKKK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacatccggcggttctttgcgccatcggcacacaaagcgacaactaatggaaacatt
ggaagcacgaagaggaatcctctttcctcagacgaagaggtgaaaaagaagagagagtcc
aagatgaaaaaacaagaagcagaagtgaaacatacgcgtgaccgaaaaaaatggaaaaaa
cgtgccgtcatagactcagactctgactcagaggagcgagaccggaagtccaagaagtcg
ccagggaagaaacagaagctgagcaagaagaacgagcctgttcactgcgtcttggaaaca
gactcagacagtgacagctttgaatccctgaagaaggcctccataaacaagcaaaatggg
acctcccaaaagagcaggtcgagtccaagtgtgaaagaggctgcaaagtccctcatcaag
tcgtcctctgttcacttgcaaattggagccaaatgtcccagcacgcccgtcacgccaaag
acggcgccgccacctcaggccaaacaaacccccacctctgtatttgactacttcggcaac
ggaagcatccagcgctcggacaagaagctggtcgccagcacgaaacgaaagacccccgtc
caggacacggatgaagtgagcgatgagcagattgctagacatctgcaaatggttgaggat
gctgagctggagaagcagatccacgaagatgaagactttggacgaacacttgccatgctg
gacgcggaaccacatgcgaagaaggtgcgtaaaggctcggacaaaaaagaggatcttgag
gccttccccaggaagaggactgcactcagccgttcaaaggccaacagaaatgacagcacg
tcagaggacgtcagaggtccttcgcccaagaaaaaccctgctctagtcaaacccagttcc
aaactggggatgatgaagaaaagggatgaggaacaagaagacgtgacccctggccaagca
cagacacatttgaaagtctcgcccaaaaaggagccaatcacagtttcatgccgagaaaag
ctgcaggcatccaaaataggagctccacttaaaacatctcccactgaggcagcgagcaca
aggactgatgaggcagagaagaagaagctcaacacttcggcttaccggaattacctcaac
agagatggaccacgagcactgggctccaaagaaatccccacgggcgcagataactgtctg
gagggttgcgcgtttgtgctgacgggtgttctggagtcactggagagagacgacaccaaa
tccctcatcgagcgccacggcggcaaagtgacgggcaacgtcagcaagaagaccacctac
ctggtgcggggccgagacagcggcgtctccaagctggagaaggcggagagttttggtacc
aaaatccttagtgaagatgatctgttggagctgattaggacgaagccagggaagaaatcc
aagtatgagatcgctgcagaggctgagagcaaagcctctaagaccaggactcctccgggc
ctggcttcaaagatcgcatctaaagcttcaaagatgtctccctccaaaggcaactccaaa
tcccctcacacgccgagtccctccaagactggacagacaaccagccgccgtgccaaaacc
acagatggcggaaccccatccggaagaggctccgttcgtagggacttgggcctttcttcg
tccgcctcctcctctgctggcccacacccaagaacgaaatcagtaaatgaggaaggtgcc
actctgctgtgggtggacaaataccgcccgtgctcgctgaaggctgtgatagggcagcaa
ggggaccagagctgcgccagtaagctgctgcgctggctgcaaaactggtacaagcatcac
agcggcggcgcctccagaccaccagttgccagatttggaaagtttggggcaggaaaagat
gacggatccggatacaaagctgctctgctctccggaccaccgggtgtggggaagaccact
acggcagcgctggtctgcgaggagttgggcttcagctacgtggagatgaatgcgagttgc
acacgcagcaaaaccaacctgaaggaagtggttgcagagtcccttaacaacaccagcatt
gagagcttctacaaaggcacttcccagaaagtcagcactaaacacgtcttgatcatggac
gaggtggacggcatggcgggcaacgaggatcgtggcggcgtgcaggaattgatcggcctc
atcaaaacttccaagattcccatcatctgcatgtgcaacgatcggaaccaccagaagatc
agatcgttggccaattactgctttgatctgcgctttcagaggccacggatggagcagatc
aagtccgctatgatgtccatcgcgttcaaggaaggaatcaagatgccgcctcccgcactt
aacgagattatcttggcggccaatcaagacatcagacaggtgatccataacctcagcatg
tggtcggccaaagacaaggtgatgacctacgaccagtgcaagtctgacgccgccggcgcc
cgcaaggacctgaagatggggccctttgacgtctgccggaaggtgttcgccgccggcgag
gagacggcgcacatgagcctcatcgacaagtccgatctcttcttccacgactactcgcta
gcgcccctctttgtccaggagaattaccttcacgttcggcccgccgccgccggcggcgac
gtcaagtcccacctcgtgctgctcagcaagacggccgacgccatcagcgacggagacctg
gtggaccgacgcatccgctctggccagaactggtctttgctgcccacgcaggccatctac
gccagtgtaatcccaggcgaactcatgagaggttacatgagtcagttcccatctttcccg
agctggctgggcaaacattcgtcggcgggcaaacattcgcgcatcatccaggagctggca
tcgcacatggctttgaagacgatgagcggcgggcgggcggtcaacttggactacctgcac
ttcctgcggcaggccctgctcagcccgctccagaaactggcggcggagggcgccggtcgc
gccgtgcggctgctggacgattaccagctggtcagggaggacgtggacggcatgatggag
atggcctcgtggggcggacggcctgacccctactccaaactggactccaaggtgaaagca
gcgttcacgcgagcgtacaacaaggaggttcatctgacgccgtactccctgcaagccgtc
aagaaggggcggcgcgccggcggccaagagtccgaactgggagcgcacgacgccgaaaag
gacggcgcggcgtccgacgacgaggaaggggacggcctcagcgcggatgctatgatcaaa
cagaagaagaccaaagccagcaagaaggagaagaaaaagtga
DBGET
integrated database retrieval system
