Phycodurus eques (leafy seadragon): 133403924
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Entry
133403924 CDS
T09682
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03013
Nucleocytoplasmic transport
pee03015
mRNA surveillance pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133403924 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
133403924 (eif4a3)
03015 mRNA surveillance pathway
133403924 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133403924 (eif4a3)
03041 Spliceosome [BR:
pee03041
]
133403924 (eif4a3)
03009 Ribosome biogenesis [BR:
pee03009
]
133403924 (eif4a3)
03012 Translation factors [BR:
pee03012
]
133403924 (eif4a3)
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133403924 (eif4a3)
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133403924 (eif4a3)
mRNA cycle factors
Stress granule specific factors
133403924 (eif4a3)
Spliceosome [BR:
pee03041
]
Complex C
Other components
EJC/TREX
133403924 (eif4a3)
Ribosome biogenesis [BR:
pee03009
]
Eukaryotic type
90S particles
Helicases
133403924 (eif4a3)
Translation factors [BR:
pee03012
]
Eukaryotic type
Initiation factors
eIF-4
133403924 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
133403924
NCBI-ProteinID:
XP_061535336
LinkDB
All DBs
Position
6:31618806..31627316
Genome browser
AA seq
406 aa
AA seq
DB search
MAAAGVQSRKRLLKDEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDFGQHVVSGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccggcgtgcagagtcggaagaggctcctgaaggacgaggacatgaccaag
gtagagtttgaaaccagcgaggaggtggacgtcaccccgactttcgacaccatgggcctg
cgggaagacctgctgcgcggcatctacgcttacgggtttgagaagccgtcggccattcag
cagcgagccatcaagcagatcatcaaaggcagagacgtcatcgcccagtctcagtctgga
acggggaagactgccaccttctgcgtgtcggtgctgcagtgtctggacatccaggtgagg
gagacgcaggcgttgatcctggcacccaccagagaactggccggacagattcagaaggtg
ctgctggcactgggagactacatgaacgttcagtgccacgcgtgtatcggagggaccaac
gtgggcgaggacatccgcaagttggacttcggccagcacgtggtgtcgggaacgccgggg
cgagtcttcgacatgatccggcgcaggagtctccgcacgcgcgccatcaaaatgttggtt
ctggacgaggccgacgagatgctcaacaaaggtttcaaggagcagatctacgacgtgtac
cgctacctgccccccgccacgcaggtggtcctcatcagcgccacgctgccccacgagatc
ctggagatgaccaacaagttcatgacggaccccattcgcatcctggtcaagcgtgacgag
ttgacgttggagggcatcaaacagttcttcgtggccgtggagcgcgaggagtggaagttc
gacaccttgtgcgacctgtacgatacgctcaccatcacgcaggccgtcatcttctgcaac
accaagaggaaggtggactggctgacggagaagatgcgagaggccaacttcaccgtgtcg
tccatgcacggggacatgccgcagaaggaacgcgagtccatcatgaaggagttccgctcg
ggggccagtcgcgtgttgatctcgacggacgtgtgggcgcgcggtctggacgttcctcaa
gtttctctgatcatcaactacgacctgcccaacaatcgagagctgtacatccacaggatc
ggccgctctggtcgctacggccgcaaaggcgtggccatcaactttgtgaagaacgacgac
atcaggatcttgcgcgacatcgagcagtactactccacgcagatcgacgagatgcccatg
aatgtggccgatctgatctga
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