Phycodurus eques (leafy seadragon): 133404088
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Entry
133404088 CDS
T09682
Symbol
tnrc6c2
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133404088 (tnrc6c2)
03036 Chromosome and associated proteins [BR:
pee03036
]
133404088 (tnrc6c2)
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133404088 (tnrc6c2)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Gene silencing
piRNA pathway
133404088 (tnrc6c2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
133404088
NCBI-ProteinID:
XP_061535677
LinkDB
All DBs
Position
6:27990817..28115223
Genome browser
AA seq
1910 aa
AA seq
DB search
MTRKDEERRGYARRKRMRAKGKLNGAERSKQHKKENHLMEEKKKKKQEEKIKKDIAQKKA
AEQKPKVPEPAPTKPSPGTPRHRQPASPTLPVSFSFSSGNDKRASCSSQLQIPVAPQPQC
LTSSAGTRYPPREVPPRFRQQEHKQLLKRGQPLPAGAFSALTPSSSSLSPSLPYSSSSTS
TSSTSPDSAEFTAGKQHSDISPKSGSAAQICQWGASLHADSISSANSWNRGNIDGSDTEA
WPSISRRSDPGQPAAPECPLGTASFSTEVSAITTASSTFLSMATGATGQPAHYTSLKSNN
NMMTGPVSANTLSSNRGWGSDAKQDGMNSGRVGTPNHWGSPGFNLNLNPSANPSAWPVLG
HEGGGVISPNGVSASSHPPGNGNGNIGNGSLGGTSACGGGWVSMVCANENEQQRPSTNTS
LSFNMETNLNTDGPNHTKQQAQEPMSPVHGLTGWGGQSPTESSQLNGDTTGSSVWGNGET
KAADTPKDSGWDATPPAGLSAWGRQGSSGGGSNGSGGWGDWGKSSGGGDASKGWDSVDAV
ISGSGQEQQLGSWGKQPGTAPASEGSGDSRDGHSHHRDRSSSMDYTPVLPRQDLDPRVLS
NTGWGQTPIRQHTVWEMEEANSDDGKSSSSSDAFESSSSNGGSACTNGGTVNPSIGTNPR
HGSDGKHESEESSGWGAPAPQQVQTASGWGDPPHSQKEATNGTTSGWGDPMPTTGPKNVG
MTSWGSEDKSPSWDSDMTKGQSTNWGEGPLSSRGWGSTNGGANSSNTRDWGEPERKNSAS
PSSMWEGEGGNGGWKENPRGGIRGGGKLTSSVNNSSWGETSRANGPVQGTWGSTKPTESS
SSSTGSGGGGSIGSWGGPGSVKQNTSSWSNVSKQDPGLESTGWEEPSPPSIRRKMEIDDG
TSTWGDPGTYSKTVNMWDRNSPNNNPGNSGPPTIKNGGMITPNNNHSVGPGNNNHHHGNP
MHHRPHHGNAPSHLQHQHHGNSCGPPNSCVPHPSAGPQGRPPLANPGWGELPSVQPKSEP
AWGEPAAPTSAVENGTSAWGKPSGGVGGWGDVGHEPSGPYGRANGPSCTAPCKPGPKPMQ
DSWGSGGDEMGMSTGQWDTEDGDMWSSPTSQESSSSCNSWVNGPKKGPSKGKMINKPDET
WIMNRLIKQLTDMGFPRDPAEEALKSNNMNLDQAMSALLEKKTDLDKRNMSISDYSNGLN
KPLICRPSMLSKDPSDRNAFLDKDGILSDDATPSPFMPSPSLKLPLANSSLPGQCLGPGN
SGLAMQNLNNRQITSGMFGSSGAAQSRAMQQQQQHPQPPVPPLSSSMPSLRAQVPQLLSP
QVQAQLLQFAAKNIGLNPALLTSPINPQQMTLLYQLQQLQMAYQRLQIQQQMMQAQRNVS
GPIRQQEQQVARTITNMQQQIQQHQRQLYQALLMKQQQLPSHSPSSQAGLHAPGGPTGGS
GSAKSTLDPFTGPHHAPGLTDTLHTKEPLSSPNAYSPYSLSGLNPNMNVNCIEVGGLSMK
EPPQPQSRLSQWTHSNSMDSLGGNTSNLENNLNKHGAISAASTLGPPGKPSQLEDSYSPY
NLMSNSDSPTNSLVPPDSWGQGKNPNEKITNGTNINWPPEFCPGVPWKGLQNIDPENDPN
MTPGSVPSGPTINTNIHDVNRYLLRDRNGGKLSDVKSTWSTGSITQNQASLTHELWKVPQ
GPRGSAAPSRPPPGLTNTKPSSTWGGNSLGLAQGWSGSYASEGTTWSTDSSNRTSSWLVL
RNLTPQIDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSSKDEAAKAQKSLHMCVLGNTT
ILAEFAGEEEVNRFFAQGQSLTSNNTTSWQANPGTNQNRMGGAAASHSMGQWSSSGGGGG
KASGGDLLWGGVPQYSSLWGPPSGEDARGIRSPTPINTLLPGDLLSGESM
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaaaagatgaggagaggcgtggatacgccaggaggaagaggatgagagcaaag
ggcaagttaaatggagctgagagaagcaagcaacacaaaaaagagaatcatttgatggaa
gaaaagaaaaagaaaaaacaagaagaaaagatcaagaaggacatcgctcagaagaaggct
gctgaacagaaacccaaagtgccagagcctgctcccactaagcccagtcccggcacaccc
cgtcaccgccaacctgccagccctacgctgcccgtctccttctcattttcttctggaaat
gacaagcgcgcctcctgcagtagccagctccagattccggttgcccctcagccgcagtgc
ctgacgtcctctgccggcactcgctacccacccagagaagtgcccccgcgcttccggcag
caggagcacaagcagctactgaagagaggccagccgctgcctgcaggagccttcagtgca
ctcacaccctcctcttcctctttgtcaccttcattaccttactcttcatcttctacaagt
accagcagcactagcccagactctgcagagttcactgcaggcaaacaacactcagacata
tctcccaagagtggctctgctgctcagatttgccagtggggagcctccttgcatgctgac
agcatctccagtgcaaacagctggaacagaggaaatattgacggaagtgacactgaagct
tggccctccattagccgcaggagtgaccccggccaacctgcagcaccagaatgccccttg
ggcacagctagcttcagcacagaagtcagcgctatcactaccgccagcagtacttttctg
agtatggccacaggtgccacaggccagccggcccactacacatctctcaaatctaacaat
aacatgatgacaggacctgtgtcagccaacacattgtctagtaacagaggttggggctca
gatgccaaacaagatggaatgaacagtgggcgagtaggtacgcccaatcactggggctca
cccggttttaacttgaatctcaatcccagtgccaacccatctgcctggcctgttctcggt
cacgagggtggtggtgttattagcccaaatggggtctccgcctcatctcacccaccaggc
aatgggaatggaaacattgggaacgggagccttggaggcacaagcgcttgtggcggaggt
tgggttagcatggtttgtgctaatgaaaatgaacagcagcgcccttcaactaacacaagt
ttgtccttcaatatggaaactaaccttaacactgatggaccaaaccacaccaagcaacaa
gctcaggagcctatgagccctgtccatgggttaactggctggggaggtcagtcacctact
gaatcatcccaacttaatggagacacaacaggaagctctgtatggggtaatggagaaacc
aaggcagctgacacccccaaggactcaggctgggacgcaactccccctgcaggtctctct
gcatggggccgccaaggtagtagtggtggtgggagtaatggaagtggtggctggggtgac
tgggggaaatcttcaggaggtggcgatgcatcgaaaggctgggactctgttgatgctgtc
atttcaggttcaggtcaagagcaacaacttggctcttggggtaagcagccaggaactgcc
ccagcaagtgagggtagtggggacagcagagatggccattctcaccacagagataggtcc
tcaagcatggattatacccctgtgttacctcgacaggacctggaccctagggtgctgagt
aacactggttggggacagactcccatccgacagcacacagtgtgggagatggaggaagca
aattctgatgatgggaaaagcagcagcagctcggacgcatttgaaagttccagttctaat
ggaggatctgcgtgcaccaacggaggtaccgtcaaccccagcattggtaccaatccgcgg
catggatctgatggaaaacatgaaagtgaagaatcatctggctggggagcccctgcacct
cagcaagtccagactgcatcaggatggggtgatcccccacattcacagaaagaagctact
aatggcaccaccagtggctggggagaccccatgcctaccactggacctaaaaatgtaggc
atgacatcttggggctctgaggacaagtcccctagctgggacagtgacatgacaaaaggc
cagtccactaattggggggagggcccgcttagctctcgtggttggggaagtactaatggg
ggtgccaacagttctaacacgagggattggggagaaccagagcgcaagaacagtgcgtcc
cccagcagcatgtgggaaggggaaggaggaaatgggggatggaaggaaaatcctagagga
ggaattagaggaggtggtaagcttacttcttctgtgaataacagctcttggggagagacc
tcccgtgccaacggcccagtgcagggcacctggggctccaccaagccgactgaaagcagt
agcagcagcactggtagtggaggagggggtagcattggttcttggggaggtcctggttct
gtcaaacagaacacctccagctggagtaatgtcagcaaacaggacccaggcttggaatct
actggttgggaggagccctcccctccgtctatacgcaggaagatggagattgatgatgga
acatccacctggggagatcctggcacgtacagcaagaccgtcaacatgtgggatcgcaat
agtcctaacaataatccaggcaacagcggcccacccaccattaagaatggtggcatgatc
acacccaacaacaatcactccgttggccctggcaacaacaatcaccaccacggcaatcca
atgcaccaccgtcctcaccatggcaatgcgccgagccatctccaacatcaacatcatgga
aacagctgtgggccacccaacagttgtgtcccacacccaagtgcaggtccccagggtaga
cctcctctcgctaacccaggctggggagagcttccaagtgttcagcctaagtctgagcct
gcttggggagagcctgcagctccaacatcagctgtggaaaacggcacctctgcttggggc
aagccttcagggggtgtcggcggatggggagatgttggccatgagccctctggaccttat
ggcagggccaacggaccctcttgtactgcaccttgcaagcctggtcctaaacctatgcaa
gacagctgggggagcggaggggatgaaatgggcatgtctacagggcagtgggacactgag
gacggggacatgtggagcagccccacctcacaggaaagcagctcctcctgcaattcttgg
gtaaatggacccaagaagggcccgagcaaggggaagatgattaacaagccggatgagacc
tggatcatgaatcgtctcatcaaacagctcactgacatgggttttccgcgagatcctgct
gaggaggcattgaagagcaacaacatgaatcttgaccaggccatgagcgctctgctggag
aagaagactgacctggacaagcgcaatatgagcatttctgattacagcaacggtctgaac
aagccactgatatgtcgaccatccatgctctctaaagatccctctgaccgcaacgccttc
cttgacaaggatggcattctttccgacgatgccaccccatcaccatttatgccttccccc
agcctgaagctccccctggccaacagtagccttcctgggcaatgtctgggaccgggcaac
tcggggctggccatgcaaaacttgaacaacagacagataaccagtggaatgtttggcagc
agtggagcagcacaaagccgggccatgcagcagcagcagcagcatcctcagccaccagtg
ccacctctcagctcctccatgccaagtctacgtgctcaagtgcctcagttactctcccct
caggtccaagcacagctcttgcagtttgcagcaaaaaacattggtctgaaccctgcactt
ttaacctcaccaataaaccctcaacaaatgaccctgttgtaccaacttcagcaactgcaa
atggcgtaccagcgtttacaaatccagcagcagatgatgcaggcgcaacgtaacgtttcc
ggtcccattcgacaacaagagcagcaagtcgcacgcacaatcaccaacatgcagcagcag
atccagcagcaccagcgtcagctctaccaggcgctgctgatgaagcagcagcagcttccc
tcccattccccctcctcgcaagctggtctgcatgcccccggtggccccaccggaggctcc
ggatctgcaaaatcaaccctggaccctttcacaggcccacatcacgccccgggcctgacc
gacacactgcacaccaaagagccgctgtcttcacccaacgcctacagcccctattctctc
tctggactgaatccaaacatgaatgtaaactgcatcgaggttgggggtctgtctatgaaa
gagccccctcagccccagtcccgcctgtcccagtggacgcactccaactccatggacagc
ctcggtggtaacacctcaaacctggagaacaacctcaacaagcacggtgccatatctgct
gcctctaccctggggccccctgggaagccctcacagctggaggattcctatagtccatac
aatctgatgtccaactcggactcccccaccaactctttggtacccccagacagctggggc
caaggcaagaaccccaatgaaaagatcaccaacgggaccaacattaactggccccctgaa
ttctgcccaggtgtgccatggaaaggccttcagaacattgaccctgagaatgaccccaat
atgacccctggcagcgtccccagcggtcccaccataaacaccaacatccatgacgtcaac
agatacctgctgcgtgacaggaatggcggcaaactgtctgacgtgaagtccacctggtcc
acggggtccataacccagaaccaagcctctctgacccatgagctgtggaaagtccctcag
ggcccacgcgggtccgctgccccatcgcgacccccaccaggcctgaccaacaccaagcct
tcctccacctgggggggcaactcgctgggcttggctcaaggatggagcggctcttacgcc
tctgagggaaccacctggagtacagacagctccaacaggaccagcagctggctggtgctg
aggaatctcacacctcaaattgacggttctaccctgcggaccctgtgcatgcagcacggc
cctttgatcacattccacctcaacctgacccaagggaacgccgtggtgcgctacagctcc
aaggatgaggccgctaaggcccagaagtctctgcacatgtgtgtgttaggtaacaccacc
atcctggcagagtttgctggcgaggaggaggtaaaccgcttctttgcacaaggccagtcg
ctgacctcaaacaacaccaccagctggcaggccaacccaggaaccaatcagaatcgaatg
ggcggggcagcggcgtcccactccatgggccaatggagcagcagcggcggaggaggaggc
aaggccagcggaggcgacctgctttgggggggagtgccccagtactccagcctgtggggg
cctcctagtggggaggatgcccgcgggatcaggagccccacccccattaacaccctgctg
cctggagatctgctgagtggggagtccatgtag
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integrated database retrieval system
