KEGG   Phycodurus eques (leafy seadragon): 133404092
Entry
133404092         CDS       T09682                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pee  Phycodurus eques (leafy seadragon)
Pathway
pee03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pee00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    133404092 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pee03021]
    133404092 (taf5l)
   03036 Chromosome and associated proteins [BR:pee03036]
    133404092 (taf5l)
Transcription machinery [BR:pee03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     133404092 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     133404092 (taf5l)
Chromosome and associated proteins [BR:pee03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     133404092 (taf5l)
    STAGA complex
     133404092 (taf5l)
    TFTC complex
     133404092 (taf5l)
    SAGA complex
     133404092 (taf5l)
    SLIK complex
     133404092 (taf5l)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd TFIID_NTD2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_SCAP NBCH_WD40 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_RIG_2nd RMC1_N Beta-prop_EIPR1 Tricorn_2nd Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_DCAF4 PEP5_VPS11_N WD40_like Nbas_N
Other DBs
NCBI-GeneID: 133404092
NCBI-ProteinID: XP_061535686
LinkDB
Position
6:complement(17160942..17171509)
AA seq 598 aa
MKRVRTEQIQYAVAQYLKRRQYVDSADGSLKAAKLFQTAEEMAASLTVQSESGCTNVVSA
APCQSDPQQYESQYARLRCFLSEADISWAKEVSAVLYPLFVYLHLDMVRCGLKSAVDSFY
TRFHAAFLHDGDQRATVEQLRHVLGAQDVAAIPRLSAFLEHKYVVRLSEGAHGYLLRYLQ
SDDNSAICRVLDAHLQLEVSASRRTDYQLYGMTGVTAPSTGAPNSSEGGEAAAAEQLPAA
VPQSEAALEALRDCIKKVREGPPSLTTVCFYAFRHTEQLLNAAEVSPDSRLLAAGFDSSA
VKLWSLRARKLKAKPHVSDVSRVRLACDVLEEEMDEEDASGSEIKMLHGHSGPVFRTAFL
TDSSGLLSCSEDTSVRYWDLGSFTNTVLYQGHAYPVWDVDVSPCSLYFASGSHDRTARLW
TFSRTYPLRVYAGHLADVDCVKFHPNSNYLATGSSDKTVRLWSTQQGASVRLFTGHRGPV
LALAFSPNGKYLASGGEDQRVKLWDLASGALFKDLRGHTDSVTGLSFSPDSSLVASSSTD
NSVRVWDVRSAHGAAPPDGSSAELVGSYTGNTSNVLNVQFMACNLLLVTGTAQDKTEV
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgaagcgggtccgcacggagcaaatccagtacgccgtggctcagtatctcaagcgcagg
cagtatgtggactctgccgacggctccctgaaagccgccaaactcttccagacagccgag
gagatggctgccagcctcaccgttcagagtgagtcggggtgtaccaatgtggtgtcggcc
gcgccgtgccagtcagacccgcagcaatacgagtcccagtatgcgaggctgcgctgcttt
ctttcagaagcagacatctcgtgggcaaaggaagtgagcgcggtcctctatcccctcttc
gtctacctccacctggacatggtgcgctgtggcctcaagtcggcggtggacagcttctac
acacgtttccacgccgccttcctgcacgacggggaccagcgcgccaccgtggagcagctg
cgccacgtcctcggcgctcaggacgtggcggccatcccgcggctgagcgcctttctggag
cacaagtacgtggtgcgcctcagcgagggcgcccacggctacctgctgcgctacctgcag
agcgacgacaacagcgccatctgcagggtcctcgacgcgcacctgcagcttgaggtgagt
gcctccaggcgcaccgactaccagctttatgggatgacgggcgtgaccgccccttccacc
ggcgcccccaactccagcgaaggtggcgaggcagcggcggcagagcagctccctgcggcc
gtcccgcagagcgaggcggccctggaggcactgcgcgactgcatcaagaaggtccgcgag
ggtccgccgtcgctcaccaccgtgtgcttctacgccttccggcacactgagcagctgctc
aatgcggctgaggtgtcgcccgacagccgcctgctagctgccggcttcgacagttccgcc
gtcaagttgtggagcctccgcgcgcgcaaactcaaggctaagccgcacgtgagcgacgtg
tcacgtgtacgcttggcatgtgacgtcctggaggaggaaatggatgaggaggatgcgtcg
ggcagcgagatcaagatgctgcatggccacagcggacccgtgttccggaccgccttcctg
acagacagctcaggcctgctgtcatgctctgaggacaccagcgtgcgctactgggacctg
gggagcttcaccaacacggtgctctaccagggccacgcctacccggtgtgggacgtggac
gtgagtccgtgcagcctctatttcgccagcggctcccacgaccgcactgcccgcctctgg
accttctcgcgcacctacccgctgcgcgtctacgcggggcacctggccgatgtggactgc
gtcaagttccaccccaactccaactacctggccaccggctccagcgacaagacggtgcgg
ctgtggagcacgcaacagggggcatcggtgcgcctcttcaccggccaccgcgggcccgtg
ctggcgctagccttctcgcccaacggcaaatacctggcgtcgggcggcgaggaccagcgc
gtcaagctgtgggacctagcctcgggggcgctcttcaaggacctgcggggccacacggac
agcgtcaccggtctgtccttcagccccgacagcagcctagtggcgtcctcatccaccgac
aactctgtgcgggtgtgggacgtgcgcagcgcccatggagctgcgccgcctgacggctct
tccgctgagctggtgggctcgtacacgggaaacaccagcaatgtgctcaacgtgcagttc
atggcctgcaacctgttgctggtgacaggcaccgcacaggataaaacagaagtatag

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