Phycodurus eques (leafy seadragon): 133404092
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Entry
133404092 CDS
T09682
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133404092 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133404092 (taf5l)
03036 Chromosome and associated proteins [BR:
pee03036
]
133404092 (taf5l)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133404092 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
133404092 (taf5l)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
133404092 (taf5l)
STAGA complex
133404092 (taf5l)
TFTC complex
133404092 (taf5l)
SAGA complex
133404092 (taf5l)
SLIK complex
133404092 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_SPT8
WD40_like
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_Vps41
PEP5_VPS11_N
Nbas_N
Motif
Other DBs
NCBI-GeneID:
133404092
NCBI-ProteinID:
XP_061535686
LinkDB
All DBs
Position
6:complement(17160942..17171509)
Genome browser
AA seq
598 aa
AA seq
DB search
MKRVRTEQIQYAVAQYLKRRQYVDSADGSLKAAKLFQTAEEMAASLTVQSESGCTNVVSA
APCQSDPQQYESQYARLRCFLSEADISWAKEVSAVLYPLFVYLHLDMVRCGLKSAVDSFY
TRFHAAFLHDGDQRATVEQLRHVLGAQDVAAIPRLSAFLEHKYVVRLSEGAHGYLLRYLQ
SDDNSAICRVLDAHLQLEVSASRRTDYQLYGMTGVTAPSTGAPNSSEGGEAAAAEQLPAA
VPQSEAALEALRDCIKKVREGPPSLTTVCFYAFRHTEQLLNAAEVSPDSRLLAAGFDSSA
VKLWSLRARKLKAKPHVSDVSRVRLACDVLEEEMDEEDASGSEIKMLHGHSGPVFRTAFL
TDSSGLLSCSEDTSVRYWDLGSFTNTVLYQGHAYPVWDVDVSPCSLYFASGSHDRTARLW
TFSRTYPLRVYAGHLADVDCVKFHPNSNYLATGSSDKTVRLWSTQQGASVRLFTGHRGPV
LALAFSPNGKYLASGGEDQRVKLWDLASGALFKDLRGHTDSVTGLSFSPDSSLVASSSTD
NSVRVWDVRSAHGAAPPDGSSAELVGSYTGNTSNVLNVQFMACNLLLVTGTAQDKTEV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggtccgcacggagcaaatccagtacgccgtggctcagtatctcaagcgcagg
cagtatgtggactctgccgacggctccctgaaagccgccaaactcttccagacagccgag
gagatggctgccagcctcaccgttcagagtgagtcggggtgtaccaatgtggtgtcggcc
gcgccgtgccagtcagacccgcagcaatacgagtcccagtatgcgaggctgcgctgcttt
ctttcagaagcagacatctcgtgggcaaaggaagtgagcgcggtcctctatcccctcttc
gtctacctccacctggacatggtgcgctgtggcctcaagtcggcggtggacagcttctac
acacgtttccacgccgccttcctgcacgacggggaccagcgcgccaccgtggagcagctg
cgccacgtcctcggcgctcaggacgtggcggccatcccgcggctgagcgcctttctggag
cacaagtacgtggtgcgcctcagcgagggcgcccacggctacctgctgcgctacctgcag
agcgacgacaacagcgccatctgcagggtcctcgacgcgcacctgcagcttgaggtgagt
gcctccaggcgcaccgactaccagctttatgggatgacgggcgtgaccgccccttccacc
ggcgcccccaactccagcgaaggtggcgaggcagcggcggcagagcagctccctgcggcc
gtcccgcagagcgaggcggccctggaggcactgcgcgactgcatcaagaaggtccgcgag
ggtccgccgtcgctcaccaccgtgtgcttctacgccttccggcacactgagcagctgctc
aatgcggctgaggtgtcgcccgacagccgcctgctagctgccggcttcgacagttccgcc
gtcaagttgtggagcctccgcgcgcgcaaactcaaggctaagccgcacgtgagcgacgtg
tcacgtgtacgcttggcatgtgacgtcctggaggaggaaatggatgaggaggatgcgtcg
ggcagcgagatcaagatgctgcatggccacagcggacccgtgttccggaccgccttcctg
acagacagctcaggcctgctgtcatgctctgaggacaccagcgtgcgctactgggacctg
gggagcttcaccaacacggtgctctaccagggccacgcctacccggtgtgggacgtggac
gtgagtccgtgcagcctctatttcgccagcggctcccacgaccgcactgcccgcctctgg
accttctcgcgcacctacccgctgcgcgtctacgcggggcacctggccgatgtggactgc
gtcaagttccaccccaactccaactacctggccaccggctccagcgacaagacggtgcgg
ctgtggagcacgcaacagggggcatcggtgcgcctcttcaccggccaccgcgggcccgtg
ctggcgctagccttctcgcccaacggcaaatacctggcgtcgggcggcgaggaccagcgc
gtcaagctgtgggacctagcctcgggggcgctcttcaaggacctgcggggccacacggac
agcgtcaccggtctgtccttcagccccgacagcagcctagtggcgtcctcatccaccgac
aactctgtgcgggtgtgggacgtgcgcagcgcccatggagctgcgccgcctgacggctct
tccgctgagctggtgggctcgtacacgggaaacaccagcaatgtgctcaacgtgcagttc
atggcctgcaacctgttgctggtgacaggcaccgcacaggataaaacagaagtatag
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