Phycodurus eques (leafy seadragon): 133404446
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Entry
133404446 CDS
T09682
Symbol
pdgfba
Name
(RefSeq) platelet-derived growth factor beta polypeptide a
KO
K17386
platelet-derived growth factor subunit B
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04010
MAPK signaling pathway
pee04020
Calcium signaling pathway
pee04510
Focal adhesion
pee04540
Gap junction
pee04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133404446 (pdgfba)
04020 Calcium signaling pathway
133404446 (pdgfba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133404446 (pdgfba)
04540 Gap junction
133404446 (pdgfba)
09142 Cell motility
04810 Regulation of actin cytoskeleton
133404446 (pdgfba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pee04052
]
133404446 (pdgfba)
00536 Glycosaminoglycan binding proteins [BR:
pee00536
]
133404446 (pdgfba)
Cytokines and neuropeptides [BR:
pee04052
]
Cytokines
Growth factors (RTK binding)
133404446 (pdgfba)
Glycosaminoglycan binding proteins [BR:
pee00536
]
Heparan sulfate / Heparin
Growth factors/receptors
133404446 (pdgfba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
133404446
NCBI-ProteinID:
XP_061536329
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Position
6:25216453..25234572
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AA seq
467 aa
AA seq
DB search
MRSWLLLLLLLLLRLGGAEVRADEGDPLPASLVDLVRNSPVSSVDDLKLLLQHEADAIEE
DDDHGILTNQTHGRHIRSIVEAEIAQQAACRVRTEVMEVTRAMLDRRNANFMLWPPCVEV
QRCSGCCNTRLLQCVPAVTSSRYLEVIKIQYINRKAHYEKAIISVEDHLACRCQPSSPNP
APLTPPSRPHPPLPRAAHPAPPMPRGSKADLHRNDDLKRNQRFFDSEEQEPAARRRPQGG
YTQLVRWTQPRPRQSADGWPSDARAERGVTGNPPQVGPGSGHEGSRQEGGEVRRRQFPSR
SYDRGESEEHNLRTQYRLNAPQSDGASLPEPTPSPQSQQSPTPVLRIPTNHKDSVTGRPN
IEATPTHPRTQAERQTGSGRRDSESADQGVAKDLTLTEEDKRQKVLEVVQGELDRSTHLH
PQQRPKLGLAMAAPPSSRQTPFRPASPRRRRKHRKRISKEAMRAMIM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgtggctcctgctgctgctgctgctgctcctcaggctcggcggcgctgaggtc
agagcagatgagggcgatccgctccctgcgtcgctggtcgacctggtgaggaactccccc
gtctcctccgtggacgacctgaagctgctgctgcagcacgaggcagacgcaatagaagaa
gacgatgatcacggcattctcacaaaccaaacacacggacgacacatcagaagcatcgtg
gaggctgagatagcccagcaggcggcgtgcagagttcggaccgaggtgatggaggtgacc
agggccatgctggaccgtcgcaacgctaacttcatgctgtggccgccctgcgtggaggtg
cagcgatgttcgggctgctgcaacacccggctgctgcagtgcgtacctgccgtcacctcc
agcagatacctggaggtgataaagatccagtacatcaacaggaaggcccactatgagaaa
gccatcatctcggtggaagaccacttggcgtgcaggtgtcagccgtcctcgcccaacccg
gcgccgcttaccccgccgtcccgccctcacccgcctctcccccgggcggcccacccggct
ccgccgatgccccgcggctccaaggccgacctccaccgcaacgacgacctgaagcgcaac
cagcggttcttcgacagcgaggagcaggagccggcggcgaggcggcggccgcagggggga
tacacgcagctggtgcgctggacgcagcccaggccgcgccagtcggccgacggctggccg
tcggacgcgcgggccgagcgcggcgtaacgggaaacccgccgcaggtcggcccggggagc
ggacacgaaggcagtcgccaggaaggcggcgaagtgcgtcgtcggcagttcccatcccgt
agctacgaccgcggagagtccgaggagcacaatctcaggacgcaatatcgactcaacgcc
ccccagtcggacggcgcctctcttcccgagccgaccccgtcgccccaatcgcaacaaagc
cccacccccgttttgcgcattcccaccaaccacaaagactcggtgaccggccggcccaac
attgaggcgacgccgacgcacccgaggacgcaagcggaacgtcaaacggggagcgggagg
cgggacagtgagtcggccgatcagggcgtggctaaggacttgacgctcacagaagaggac
aagaggcagaaggttctggaagtggttcagggggagctagaccgatccactcatcttcat
cctcagcaaagacctaagcttgggctcgcaatggcggcgccgccctccagccgccagacc
cctttcaggccggcgtccccccgtcgtaggaggaaacaccgcaagcgcatcagcaaggag
gccatgagagccatgatcatgtag
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