Phycodurus eques (leafy seadragon): 133404626
Help
Entry
133404626 CDS
T09682
Symbol
palb2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03440
Homologous recombination
pee03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133404626 (palb2)
03460 Fanconi anemia pathway
133404626 (palb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pee03400
]
133404626 (palb2)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
133404626 (palb2)
FA (Fanconi anemia) pathway
Downstream FA components
133404626 (palb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
SART-1
Inh
FtsL_2
Motif
Other DBs
NCBI-GeneID:
133404626
NCBI-ProteinID:
XP_061536669
LinkDB
All DBs
Position
6:complement(18011522..18031903)
Genome browser
AA seq
1008 aa
AA seq
DB search
MQSSAVGDVLHCEEQLRSTLYCDDKDDLRRKLAQLRREYLKTAQKLQRAERQEAVRKHVR
NDVTPKQDQTEPEGTPKPTYGGPADSSSLVRTLLPSTPEPDLVRHNPPCVSRASPALRLR
SRRSRMRWQSHSEEGGKVQGDARFADESQSSGSVSPSLLLSHWNVPALEDEKQEGKKEAE
VPDGNRTENHTVGGDGGHVTLDEKSHENLEKQASYFKPSFCSVETIAGGEGDGKRLLESC
TLVEGLLFPAEYYIRTTRSMALSQSQPDLRAVIHTQLNSGRPRQKKANPVASSKRSSPMS
ISKTPIEAVSPPRVTCLRKGRKSQRGRGRGKPRVQRPSPSPGPSSLHETNSPKSHSSLEE
VEPPSGDPKATSPDTQPSSGAQKVLPILYKMVKSTPVASGSEKWRSLLLPSSKPTPTPLL
PPLSQLAGDLLHLDLHQDFHLPDDQFASLKLSKLRQVAVESRAEPFASLCHNTGGVLRHP
GTPVTTLSVPLSLTPMAGKSSSQSKDDDSWNMQLTGTSHLDPPSICQSPEEQELKCGDRD
REVLPCRDHPREEGQEENRLKDFFPKTVRNEHSVNSQLRLSPPVASAPLHPPSSTFPSSP
VLPSLGFTPLASLPTATVVPLLSPSTRTQSPQHLATLDTAAPAPDVQMLTAVEEHRSCTL
KAPAGGVLVDACCLLDSGSHLCIAAAGKWAVCLWSRASSLSDWTLRHTWPFTEPVINIFS
IPDAAGLMCVTLGQLEIIEVRVLSCCGSKPGLLLDGGVQAAVGVAQSRVVTSSYSASGCT
LQVFTLSNDGSTSRCVPLGSPGVCVGALAQVDALPDALIGTDEGGRLFVWNLKSGHLLQK
IQLSDSLSNTSCLRGFSCSGVLLVLLQHLSLGCHQDEKNKSKDETFFNQEEKEKKSVLFS
LVALNPLTGKSVLAARLDPPTSWSGRLCEADASSAAVAGLSQSGCVCMWQLRRRSCDGVM
VAVAAARDCEGWQLARWAEGGATLVMGHQNGDITLHFDLATQDDFMGF
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagtgccgttggggatgtcctgcactgtgaggagcagctgagatccacactc
tactgcgatgacaaggacgatcttcggaggaagttggcccagctccggcgggagtatctc
aagacagcccagaaactgcagcgtgctgagcgacaggaagcggtgcggaaacacgtgagg
aacgacgtcactccaaagcaggaccagacagagccagaggggacacctaagcctacatat
ggaggtcccgctgactccagcagcttggtcaggactctgcttccgtccacgccggaaccg
gacctggtccgccacaacccgccctgcgtttccagagcgagtccggccttgcgcctgcgt
tcccgccgcagccgcatgcgctggcagagtcacagtgaggaaggaggaaaggtccaaggc
gatgcgaggtttgcagatgaaagccaaagttcgggatcggtatcgccctctctgctgctc
tcgcactggaatgttccggccctcgaggatgagaaacaagaagggaaaaaggaagcagag
gtgccagacggaaacagaactgagaatcacactgtgggaggagatggcggacacgtcaca
cttgatgaaaagagtcatgaaaatttggaaaaacaggctagctacttcaaacctagtttt
tgcagcgtcgaaacaatagcaggaggggaaggagatgggaagagactgttggagtcctgc
accctggtggagggactacttttccctgcggagtactacatccgcactaccaggagcatg
gctctctcacagagccagccggacctgcgggctgtcatccatacccagctgaactcgggg
cgacctcggcagaaaaaagccaacccggtcgcctccagtaagcgttccagtccgatgtcc
atcagtaagacccccatcgaagccgtttcgccccctagagtcacttgtctgaggaagggt
cggaagagccagaggggtcgaggcagggggaagcctcgggtccagagaccctcgccttct
cctggcccgtcgtctctccatgagacaaattctccaaaatcccactcatctctggaagag
gttgagccgccatccggcgatcccaaggccacgtcccctgacacgcaaccttcttccgga
gcccagaaggtcttaccaatcctttacaagatggtcaagtccactcctgtggcctcaggt
tctgaaaagtggcgttccctcctcctgccatcttctaagcccacccccactccattactt
cctcccctctcgcagctggctggcgacctgttgcacctggacctccatcaggacttccac
ttgcccgacgaccagttcgcctccctgaagctcagcaaacttcgccaagtggctgtggag
tccagagcggaaccttttgcgtcgctgtgccacaacacgggtggtgtcctgcggcatcct
ggaactccagtgactactctcagtgtgccgctcagcctcacacccatggctggcaaatca
tccagccaatcaaaagacgatgactcctggaacatgcaactcactggaacctcacatttg
gaccctcccagcatatgtcagagcccagaggaacaagaactgaagtgtggggaccgcgat
cgggaggttcttccctgccgtgatcacccccgagaggaaggccaggaggagaacaggctt
aaagacttttttcccaaaacggtcagaaatgagcacagcgtcaactctcagctgcgactg
agccccccagtggcctctgccccactgcacccgccctcatctaccttcccctccagtcca
gtgctgccctccctggggttcaccccccttgcttcattgccaactgccactgtcgtcccc
ttgcttagcccctccacccggacccagtccccccaacacctcgccactctcgacacagct
gccccggcacctgacgtccaaatgctgacagcggtggaggagcacagaagctgcacactg
aaagccccggcaggaggtgttctggtggacgcatgctgcctgttggactcgggcagccac
ttgtgcattgctgcggcgggaaagtgggcggtgtgtttgtggagtcgtgcgtcgtcatta
agcgattggaccctacgacacacgtggcccttcactgaaccggtgatcaacatattttcc
atcccggatgccgccggcctcatgtgtgtgactctgggtcagcttgagatcatagaagtg
agggtgctgtcgtgctgtggcagcaagcctgggctactgcttgatggtggtgtccaggcg
gctgtgggcgtcgcacagtccagggtggtcacctcctcgtactctgcgtctggctgcacg
ctacaggtgttcacactctcaaacgatggcagcacttcccgctgtgtccctcttggctcg
cccggtgtttgcgttggagcgctggctcaagtggatgcactccccgacgctctgatcggc
acagatgagggaggacgactctttgtttggaatttaaagagcggacacttgctgcagaaa
atacagctcagtgacagtttgtcaaacacgtcctgtttaagaggattctcctgcagtggt
gtgttgttagtcctcctgcagcacttgtctctgggctgccaccaggacgagaaaaacaag
agcaaggatgaaacgttcttcaatcaagaagaaaaggagaagaagtcggtgctcttctcc
ttggttgcgttgaatcctctcactggtaaaagcgtcctggcagcgcgtctggacccgccc
acgtcctggtcgggaaggctgtgcgaggctgacgccagcagcgctgcggtggcgggcctg
agtcagagcggctgcgtgtgcatgtggcagctgaggcggcggtcatgtgacggcgtcatg
gtggcggtggctgcggcccgtgactgtgagggctggcagctggctcgctgggcagagggt
ggcgccacactggtgatggggcaccagaatggtgacatcaccttgcactttgaccttgct
actcaggacgattttatgggattttag
DBGET
integrated database retrieval system
