Phycodurus eques (leafy seadragon): 133404804
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Entry
133404804 CDS
T09682
Name
(RefSeq) protein Atg16l2-like isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133404804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pee04131
]
133404804
03029 Mitochondrial biogenesis [BR:
pee03029
]
133404804
Membrane trafficking [BR:
pee04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
133404804
Others
Specific organelles associated proteins
Auto phagosome
133404804
Mitochondrial biogenesis [BR:
pee03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133404804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ATG16
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_DCAF12
Troponin-I_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
133404804
NCBI-ProteinID:
XP_061537108
LinkDB
All DBs
Position
7:31185140..31206075
Genome browser
AA seq
589 aa
AA seq
DB search
MKDSGRGGTRTESELWKAHVVRQLRRRDREQHHSFRDLVCAYSRLLDQSAETDSILRSAR
RGDSGWPSCVWLKATTGELAYQVVERQQEMKIKDNILEAQRDRLLQEERRAAAARDVRLQ
LRLRAERLGGENGLLKSDYDALLERRRRAERRLCEEDGIALKRQAATRLNLCNDRRCRVQ
DVNLQKDLQTATTSKVNVDIDRFSFSLPNGRCLSLKKRFAEKSQGRLLRSAPASESSPRI
LAFIRELFERKQGRSVRASEEEELARPVRVPMSARVPSRALHILEAHEQGVNAAAFCSSS
ARLASAGTDRVVKVWEVQAGALRHQTTLDGSTEGLTCVQFDPTGHRILAGSYDKSALLWR
LDRPVAKLTLTGHTRKVTAARFSRHQVVTGSADGTIRMWDLQRAACVRLAEVSSHCSDVV
CSDNIAISGHFDRKIRLWDTRLSGCVHRLSAHDKVTSLDLSADGRRLLSCCRDDGLRLLD
VRRWSDHGAPFRRRSSANTCGFTTVLCGRADGFKCASDSAKAAISPDARFVAAGSADGAV
YVWNASTGNLETRLADKHSASVGAVCWSSSGEYAASVDKRGRAVLWGDI
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactcggggcggggaggaacccggacggagagcgagctgtggaaggcgcacgtc
gtccggcaactgcggcgccgagaccgggagcagcaccacagcttccgagacctcgtctgc
gcctactctcgcctgctggaccaaagcgccgagaccgactcgatcctccgaagcgcaaga
cgcggcgactccggctggccgtcgtgcgtgtggctgaaggcgaccaccggagagttagct
tatcaagtggtcgagaggcagcaggagatgaaaatcaaagacaacattttggaggctcaa
cgggacaggctgctacaggaagagcgccgcgcggcggccgcgcgggacgtccgcctgcag
ctgcgacttcgggcggagcggctcggaggggagaacgggctgttgaagagcgactacgac
gccctgctggagcgtcggaggcgagccgagcgccgtctctgcgaggaggacgggatcgcc
ctcaaacggcaggcggccacccggctcaacctgtgcaacgacagacgttgcagagttcaa
gacgtcaacctgcagaaagatttgcagaccgctaccacttcgaaggtcaacgttgacatc
gatcgattctcattcagccttccaaacgggagatgtttatcattaaagaaaaggtttgca
gaaaaaagtcaagggcgcctgttgaggtcagccccagcttcagaaagttctccgaggatc
ctggcgttcatcagagaactctttgagaggaagcagggccgatctgtgcgcgcttcagaa
gaggaggagctcgcgcgtcctgtcagagtcccgatgtcagctcgagttccgagccgagcg
ctgcacatcctggaggctcacgagcaaggcgtcaacgcggcggcgttctgctccagctcc
gcccgcctggccagcgcgggaactgacagggtggtcaaagtgtgggaggtccaagcaggc
gccctcagacaccagaccaccctggacgggagcacggaaggtctgacctgcgtccagttt
gaccccacgggtcacagaattctggcgggctcgtacgacaaatctgctctgctgtggcgt
ttggaccgacccgttgccaagctgaccctgacgggccacaccaggaaggtgacggccgct
cgattcagtcgccatcaagtcgtcacaggaagcgccgacgggaccatcaggatgtgggac
ctccagagagccgcctgtgttcggttagcggaagtgtcgtcccactgcagtgacgtcgtc
tgctcggacaatatcgccatcagcggacattttgaccgcaagatccgattgtgggacacc
aggctgtccggctgcgtccaccgcctgtccgctcacgacaaagtgacgtcgttggacctc
agcgccgacggccggcgcctgctcagctgttgccgtgacgacggcctccggctgctcgac
gtccgcaggtggagcgatcacggcgcccccttcaggaggaggagttcagcaaatacgtgc
gggttcactaccgttttgtgcggcagggccgacggcttcaagtgcgccagcgacagcgcc
aaagcggccatcagccccgacgctcgcttcgtggcggccggctcggcagacggcgccgtc
tacgtttggaacgcctccactggaaacctggagacgcgcctggctgacaagcacagcgcg
tccgtcggcgccgtctgctggtcgtcgtccggcgagtacgcggcgagtgtggacaaacgg
gggcgggccgtcctctggggtgacatctga
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