Phycodurus eques (leafy seadragon): 133404809
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Entry
133404809 CDS
T09682
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pee04515
]
133404809 (clstn1)
Cell adhesion molecules [BR:
pee04515
]
Cadherins
Cadherin related
133404809 (clstn1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
V_ATPase_I
PRIMA1
EphA2_TM
PFF1_TM
Cadherin_C_2
Toxin_R_bind_N
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
133404809
NCBI-ProteinID:
XP_061537128
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All DBs
Position
1:17598785..17649145
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AA seq
981 aa
AA seq
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MRFRRNKLFASAVGLVLSLVCALDAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSSGEGIIRAKEKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDLNEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICNYEIVTPDVPFTIDKDGFIKNTEKLNHGRENMYKLTVTAYDCG
KNRASEDVLVKISIKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRATI
ELETNHIGKGCDRDTYSEKSLHKLCGASSGTMELLPAPSSSANWTVGLPTDNGHDSDQVF
EFNGTQAVKVPDGLVSTSLKELFTISVWMRHGPGAHEKETILCNSDKTDMNRHHYSLYVH
NCRLILLLRQDPSEVENYKPAEFHWKLEQVCDKEWHHYVLNVELPTVTLFVDGSTFEPFL
VTEDYPLHASRIETQLTIGACWQENSGHDNDTETVSESSSGGNARMAQFFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASTVKVEFNPNQSSLTVEGDDIDAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEESCVTMPDVEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESQEGVTLFPELRIVSTITREVETDTESLATEGADDDPTVQETVVSEEIMHNLDT
CEVNVVGDELDAEHEGLEVDMDQLQQRSLEMSSSHLGLVITGVNTMANYEQVLHLIRYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTASTMEHLSNALVQPNFINPVHQAS
VDLSGHNLVNGHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQENGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEEGEEEDDITSAESESSEDDEGGEQ
EDQQGASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccgaaggaataaactctttgcatccgccgtcggactggtcctgtcgttggtg
tgcgcgctggatgcggctaaagtcaacaagcacaagccatggatagagacaacataccat
ggcatcgtgacagagaacgatgacaaagtgctgctggacccccccttaattgcactggac
aaggatgcgcctctacgctacgcagagagttttgaggtgaccctcactgaagaaggcgag
atttgcggcttcaggatccatggacagaatgtcccctttgaagctgtggtcctggacaag
tccagtggtgagggaatcatccgggccaaggaaaagttagactgcgagctgcagaaggaa
cacaccttcaccatccaagcatatgactgtggagagggacctgacggtgccaacatgaaa
aaatcacacaaggccactgtgcacatacaggtgaatgaccttaacgagtactcgccagta
ttcaaagagaagtcctacaaagccaccgtcatcgagggaaagaaatatgatagcattttg
aaggtggaggcagtggacgcagactgctctttccagttcagtcaaatctgcaactatgaa
atcgtcaccccggatgtgcccttcaccattgacaaagatggcttcatcaagaacaccgag
aaactaaaccacggcagagagaacatgtataagctgactgtgaccgcttatgactgtggg
aagaaccgtgcctctgaggatgttctggtcaagatcagcattaagccaacttgcaaaccc
agctggcaaggcttcaataaaaggattgaatatgagccaggcacaggaagcttggcactt
tttcccagtatgcacctggagacctgtgatgagccaatcacgtccatcagagccacaatt
gaactagaaaccaaccatattggaaagggctgtgaccgcgacacctactctgagaagtcc
ctgcacaagctgtgcggagccagctctggtacgatggaactgctgccagcacccagcagc
tctgccaactggacggtaggactaccaaccgataacgggcatgacagcgaccaggtgttt
gagttcaatggcacccaggctgtcaaggttcctgatggcttggtgagcaccagcctgaag
gagctcttcaccatctctgtgtggatgagacatggccccggggcccacgagaaggagacc
atcctttgcaactctgacaagacagacatgaacaggcaccactattcactctacgtgcac
aactgcaggctgatccttctcctccgtcaagatccatcggaggtggagaactacaaacca
gccgagttccactggaaactcgagcaggtgtgtgacaaagagtggcatcactatgtgctg
aatgtggagctccccacggtgacgctgtttgtggatggatctacttttgaacccttcctg
gtcacagaggactacccactgcatgcctccaggattgagactcagctcaccattggtgct
tgctggcaagaaaactcgggacatgacaatgacactgagacagtctctgagtcttcctca
ggcggaaatgcacgcatggcccagtttttccgtggaaaccttgcagggctgatgattcgc
tcaggcaaactggagaacaagaaggttattgactgtttgtacacttgcaaggagggcctc
gatgtgcagctgcccgaggaggtagcttccacggttaaggtggagtttaaccccaaccag
tcctccctgactgtcgagggggacgacattgatgcctttgacaaggtcatgcagcacatc
tcctacttgaactcccgccagttccccacacccggcatcagacaccttcgcatctccacc
actgtcaaatgcttcaacgaggagtcctgcgtgaccatgccagatgttgaaggttatgtg
atggtgctgcagcctgaggagcccaagatcagcctgagtggcattgaccactttgcccgc
agcgctgccgaatttgagagccaagaaggcgtgacattgttccctgagctgcgcatcgtc
agcaccatcacccgcgaggtggagaccgacacggagtctctagccacagagggagcggat
gatgaccccacagtccaagaaacagtggtgtcggaggagatcatgcacaacctggacaca
tgcgaagtgaacgtggtgggagatgaactggatgcggagcacgagggccttgaggtggac
atggaccagctccagcaacgcagcctggagatgagctcttctcacctcggcctcgtcatc
acaggcgtgaacaccatggccaactacgagcaggtcctgcatctcatccgttacaagaac
tggcacaccgaggcgctcttcgacaggaaattcaaactggtgtgctctgagctcaacggg
cgctacataagcaatgacttcaaggtcgaggtgaatgtaatccacacagccagcaccatg
gagcatctcagcaatgccttggtgcagcccaacttcatcaaccctgtacatcaggcctcc
gtggacctgtctggtcacaacctggtcaacggtcaccaagcatcagtggttcccagcgca
gccaccatcgtcatcgtcgtctgcgtcagtttcctggtgttcatgatcattctgggcgtg
ttccggatccgggccgcacaccagcgcaccatgagggaccaggagaacggcaaggagaac
gagatggactgggatgactctgccctcactatcaccgtcaaccctatggagacgtacgaa
gaccagcacagcagtgaggaggaggaggaagaggaggaggagagtgaggaaggggaggag
gaagacgacatcacaagcgccgagtcggagagcagcgaggatgacgagggcggcgagcag
gaggaccagcagggggccagcagacagcagcagctggaatgggacgactccaccctcacc
tactag
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