Phycodurus eques (leafy seadragon): 133404829
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Entry
133404829 CDS
T09682
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04120
Ubiquitin mediated proteolysis
pee04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133404829 (ube4b)
04120 Ubiquitin mediated proteolysis
133404829 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pee04121
]
133404829 (ube4b)
Enzymes [BR:
pee01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133404829 (ube4b)
Ubiquitin system [BR:
pee04121
]
Ubiquitin ligases (E3)
U-box type E3
133404829 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
APC_rep
Motif
Other DBs
NCBI-GeneID:
133404829
NCBI-ProteinID:
XP_061537192
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All DBs
Position
1:17680261..17704957
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AA seq
1334 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPNTPLSTPLTSPQRETPPGPLPGPSGVTSQPLPPAA
SQSLGLNAHSGTPATSPIGTTGVAFGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSTNSDVTEDQALQLICKILRVS
WKEQHRDVIFLPSLGAEFQRNPKDVYSDFKDLIGQILMEVLMMSTQSPVHNPFASLTSTS
QPIAAAKSPDRHLTLIEPCSQGGSPMGPNAGSFGASSLSSLYACGSPYPITLDAAKRTSP
NVPTSTTSSVPSTPSTPQFNVPPSPPTTAASLRQSLNPPSAPMPISLRYRPYSVSSPWGA
PSPSSPGHRALSFFSASPSPVGPTVPPNTPVPLPTPSTRSLFLSSPPTVLPFPRTNSRQT
AFVSRIPPSSHGACGGSVSCDLAGDRFTIEACKETEMLNYLIERFDSVGMEERKAPKMCN
QPNVSQLLSNIRSQCISHVALVLQGSLTQPRSPLQHSLLVPYMLCRNLPYGFIPELVRIT
HQEEEVFRQIFIPILNGLALAMKECSFDSDNYKFPLMALAELCEIKFGKTHPVCSLVTSL
PLWCPKPLSPGCGREIQRLSYLGAFFSLSVFSEDDTKVGDKYFSGPAITMENTRVVSQSL
QHYLESARGDLFKVLHNILLNGETRDLALNYMAALVNYNVKKAQMQTDDKLVSTDGFMLN
FLTVLQQLSMKIKLETVDPFYIFHPRCRFVVSPEETRLKATMEELKSWLSELHEDPAKFS
EPKFPTECFFLTLHTHHLSILPGCRRYIRRLRAIRELNRTVEELKNSEAQWKDSPLASRH
REMLKRCKTQLKKLVRAKACADVGLLDENLLRRCLQFYSTVIQLILRMVDPAYPNITLPL
NPEIPKSFAVLPEFYIEDVAEFLLFVVQYSPQVLYEPCVQDVVTFLVVFICSQNYIRNPY
LIAKLVEVLFVTNPAVQPRTQRFSEMMENHLLSIKQLVPALMKFYTDVEHTGATSEFYDK
FTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIH
EIQEEMKNKDQWDQLPRDQQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFL
RPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAK
AIADDQRSYSRELFEEVISKMRKAGIKSSIAIEKFKLLSEKVEEIVAKNSQSEMDYSDAP
DEFKDPLMDTLMTDPVMLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLESIPVLKER
IHAWMRAKQGGRLV
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattgagtgcagatgagattcgaagaaggcgattggcacggctggcagggggg
cagacctcacagccaaacacccctctcagtaccccactgacatccccacagagagaaact
ccaccgggaccccttcctggaccatcaggtgtaacatctcagcccttgccaccagctgct
tctcaatcattggggctcaatgctcacagcggtactcctgccacttccccgattggcacc
actggtgtggcttttggcagtcaaagtagtgaaggtgtgagctccctttccagctccccc
tccaacagccttgagactcagtcccagagtttgtcccgatcccagagcatggacatcgac
actgcttcttgtgaaaagagcatgtcccaagtggatgtggattcggggatagagaacatg
gaggtggaagacagtgaccgcagggagaaaaggaacttgaccgaaaaagaaacgtctaca
aactcagatgtcacagaggaccaggctctgcagctcatttgtaagatcctccgtgtgtca
tggaaggagcagcacagagatgtcattttcctcccttcactgggtgctgaattccagcgt
aaccctaaagatgtttactcagatttcaaagacctgatcggccagatcctgatggaggtc
ctcatgatgtccacccagtcgcctgtccataatcctttcgccagcttgacctccacgtcg
cagccaattgcagcagccaaatctccggacagacacctaacactgatagagccctgcagc
caaggtggcagccccatgggtcccaatgcaggatcctttggagctagctctctgtcaagc
ctgtatgcgtgtggtagtccttacccaattaccctggatgcagccaagaggacctcacca
aatgttcccacctccaccacttcctctgtaccttccactccgtctacaccacagttcaat
gttccacccagcccacctaccaccgctgcttccctgagacagtccctcaaccctccttct
gcccccatgcccatctcccttcgctatcggccttactctgtttcatctccctggggagct
ccgtccccatccagcccaggacatagagcattgagctttttttcagcttctcccagccca
gtaggccccactgtgcctccaaataccccagttcctctgccgacacctagcacccggtcc
ctcttcttgagttcaccccctacggttctgccttttcccagaacaaattcccgacagacc
gcctttgtgtccaggatcccgccttctagtcatggtgcatgtggagggtcagtgtcttgt
gatttggctggcgaccgcttcactattgaagcatgcaaggagacagagatgctgaactac
ctcatcgagcgcttcgacagtgttggcatggaggagaggaaggctcctaagatgtgtaac
caaccaaatgtcagccagcttctgagcaacattcgctctcagtgtatctctcacgttgcc
ctggtcttgcaaggctctctgacccagccccggagccctctccagcattctttgctggta
ccatatatgctgtgccggaacctcccatatggctttatcccggagctggtgcggattacc
caccaggaagaagaagtattcagacagatcttcattcctatcctcaatgggctggctctc
gcaatgaaagaatgttcctttgacagcgacaactataaattccccctcatggcattagct
gagctttgtgaaatcaagtttggaaagactcaccctgtgtgcagtttggtaacatcactt
cctctgtggtgtcccaaacctttgagcccaggatgtggcagagagatccagaggctgtcc
taccttggtgctttcttcagcctctctgtgttttctgaggatgataccaaagtaggagac
aagtacttctctggtccagctatcaccatggagaacacgagagtcgtcagccaatccttg
cagcactacctggagtcggcaaggggtgacctttttaaagttcttcacaacatcctacta
aatggagagactcgggatttagccctaaattacatggcagctttagtcaactacaatgtg
aagaaagctcagatgcagaccgatgacaagctggtgtcgacagacggtttcatgctcaac
ttcctgacagtgctgcagcaactcagcatgaaaatcaagttggagacagtggatcccttc
tacattttccacccccgttgtcgctttgtcgtcagcccagaggagacgcgcctgaaggcc
acgatggaggagctcaagagctggctgtctgagctacatgaagatcccgccaaattctct
gagcccaagttccccacagagtgtttcttcttgaccctgcatacgcaccatttgtctatc
ctgcctggctgcaggcggtacatccgcaggttgcgagcaattcgtgaacttaacaggact
gttgaggagctgaaaaacagtgaagcccaatggaaggactcccccctggccagtcgccac
agagaaatgctcaagcgctgcaaaacccaactcaaaaaactggttcgagccaaagcttgc
gctgacgtgggccttctggatgagaacctgctccgcagatgtctgcagttctacagtact
gtgattcagctcattctccgaatggtggaccctgcttacccaaacattaccctgccattg
aaccctgagattcccaaaagttttgctgtgctccctgagttctatattgaagatgtagct
gagtttttacttttcgttgtgcagtattctccccaggttttatatgagccttgtgttcaa
gacgtagtcacctttttagtggtgttcatctgcagtcagaactacatcaggaatccatac
cttattgcaaagttggtagaagtcctgtttgtcaccaaccctgctgtgcagcctcgcacg
cagcgcttttcagaaatgatggagaaccacctgttgtccatcaaacagctggtgcccgcc
cttatgaagttctacactgatgttgagcatactggcgccaccagtgagttctatgataag
ttcacaataaggtaccatatcagcactatctttaaaagtctgtggcaaaacattgcccac
cacggcacattcatggaggagtttaactccggcaaacagtttgttcgctacatcaacatg
ttaatcaatgacaccaccttcctgttagatgagagccttgagtctctgaagcgtattcat
gagattcaagaggaaatgaagaataaggatcagtgggatcagctgcccagggaccagcag
cagagccgtcagtcccagctgactcaggatgagcgggtgtctcgctcctatctggccctg
gccacagagacagttgaaatgtttcacatcctcaccaagcaggtccagaaacctttcctc
aggcctgagctgggcccacgtttagctgctatgttgaactttaacctccagcagctctgt
gggcccaagtgccgggacctgaaggtggagaatccggagaaatatggctttgaacccaag
aagctcttagaccaactgactgacatctacctgcaactagactgtgcccgatttgctaaa
gcaatagcagatgaccagcggtcgtacagccgagagctctttgaggaggtaatctcaaaa
atgaggaaggctggcatcaagtcctcaatcgccatcgaaaaattcaagctgctatcagaa
aaggtggaggaaatagtggccaagaactcccagtcggaaatggactacagtgacgcacct
gacgagttcaaagaccctttgatggacacgctgatgaccgaccctgtgatgctgccctcg
gggaacatcatggaccgatccatcattcttcgccacctgctcaactcgcccactgatccc
ttcaaccggcagccgctcactgagagcatgctggagtcaattcctgtactgaaggagagg
atccacgcttggatgagagcgaaacagggaggacgacttgtctaa
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