Phycodurus eques (leafy seadragon): 133404870
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Entry
133404870 CDS
T09682
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133404870 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pee04091
]
133404870 (frem2b)
Lectins [BR:
pee04091
]
C-Type lectins
Lecticans
133404870 (frem2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
DUF6522
Motif
Other DBs
NCBI-GeneID:
133404870
NCBI-ProteinID:
XP_061537316
LinkDB
All DBs
Position
7:complement(28225918..28312258)
Genome browser
AA seq
3108 aa
AA seq
DB search
MAAISPAAGARARASGAAFLALALLLATTSDAEFRNQHGLSYALRSELSEDTVLVANNGI
RVPLGRSVFVDPINDLVIQVRPGDRCSITVLDNDPLSQRPGALTPKKFPCEFGPHDVRYS
HFGSRSPARDRVKLQLRYDTQTDTIVIPFMVEVEVVFTQLEVLTKNLPITVEKPLGTSNP
VDRRVLEFTFDRQAQRCRVTPLSGGGVLPKYGSLVDGSSLATGMTDCDDFIRMDLRYRHT
FALKSPSRDHIPVVVELQDKEGNLLKQEFFQILVRIKEGEENTAPKPSFVAMMMMEVDQF
VMTALTGDMLAAEDAESDPDELIFNITSPLSYEEGYIVSTDDRNLPLTSFYQGDLKDFKI
AYKPPAVDSDSERIFQLEFEVVDTEGAVSDPFAFMIVVKPMNTLAPVVTKNTGQLLYEGQ
SRPLSSSQNLEISDEDNLDKVRIAVIDGLKHGDLTVPGSGRKFFTPADLNAGQVIYQHDG
SDTYSDNIVFRMTDGSHEVEFLFPITVVPTDDEPPIVNANTGLVLFKNQMMPISSLVLSA
ADIDSEDSTIKFTIQPPFSTFGQVLLRQAEAPEDPSTWKFNTEEEMYEKAVTEWLQRDVT
DGKVFYKHIGPHSASTITDQFRFHVQDDNDPPNRSEESSFVIKVLPVDDLPPELHPEATL
QMTVHEYQLTHLRKKFIRYTDLDSEDRDLRYAVAQPPTDTDENSPVVLGALVLTEDPKVE
VTTFTQAQINHHKIAYKPPDLELGITTHILQFRYTVEDVSGNGVEGVFTIFLKPVDNKPP
QITNSGFTVLERGAHTITTTELYTSDSDTDSKLISFTVSQPPLHGHVQFMFTDMTRGDAF
SLKDIDNGRVSYLHNGDESIADSIQIDVSDGVHVVPIKVKINVKPIDDEIPAISLPAGTI
GSSIDVLENGATEITSNVIQGRDEDTDDLRLTFILEDPPSLGEILVRGLPSSVFTQADII
NGHVIYTHTSGELGFTTKEDIFNLTLTDMSDEWTVGGNKITGVRVHVTILPLDSQAPQVF
VGKLFSVPEGEKNAIRTHHISADDIDTLIEDLLCTIIVQPTSGYVENISPAPGSEKSRSG
VAVSAFTIKDIQQHHIYYVQSIHRGVEPVEDRFTFRCSDGINFSERHFFPISIVPANDEK
PEIYMREFVVMEGMNIVIDTPILNAADADVPSDQLTFIIARPPAHGFILNQLTTGTVPVS
NFTLEQISEASSVVYEHDDSETTQDSFDVLLTDGKFRVQKTAIVMIIPVDDETPRMAIND
GLDVEVGDVKVINGDILRATDLDSEDSTLTYIIRYVPRQGYLQKTMSNGMLHNITVGMNF
TQEDLDQGLIIYVHNGQEGVRDLIKFDVTDGYNHLIDRYFYVTVGGIDMVFPYVVSKGVS
LKEGGRVTLTTDLLSTSDHNSPDEHLVFTITRAPVRGHLECTDTPGMPISSFTQLQLAGN
KVYYIHTAEDEVKMDSFEFEVTDGYNPVFRTFRIAITDVDNKKPVVTVHGLVVMEGENKL
ITPFELTAEDRDTADRLLKFTVTQIPVHGRLLFNATRPVASFTEQDLNDNMISYKHDGTE
SAEDSFSFTVTDGTHTDFYLFPDTVFETRKPQVMKISILPLDNGVPQIGVNKGAPTLRVL
DGGHLGFVMTSKSLRAEDRDSTQGSVLFRITNAPKHGYLINTGKGNATITTFTQADINNM
NICYILTKGDDATNDIFHFSIEDSGGNKLRNQQFRLNWAWISLEKKHYVVDEEVKFLEVV
LKRRGYLGETSFVSIGTKDGTALKDKDFRGKAQKQVQFNPGQTAATWKVRILSDSEYEVS
ETFQIVLSEPVMAVLEFPEAADVEIVDPGDESSVFIPAAAYSIEEDVGELLVPVRRSGDV
GQELMVVCFTQQVSAAGTVPTTVLSYSDYISRPEDHRSVLRFDKGELEKPCRVVIIDDSL
YEAEESFNLTLSVPVGGRLGARFPSTRITIVPDMDDAPVFYFGNTNHHVDESDGFVEVQV
WRTGSDLSKAGAVTVRSRKTDPVSAQAGADYVGISRNLDFAPGVAMQTFRVTILDDLGQP
VLEGPETFELVLQMPVNGVLGEPGKAGILINDSVSDLPKVQFRDALYVGHEKSGRISATV
YRSGDIGHKSTVRCYSRQGTAQVMMDFNERPNTDASVITFLPGEVEKPCDLELVDDTEHE
EEEELRLVLGSPKSDSPFGASIGRQNETLIRIKDDADKAVIKFGETKFSVNEPKERGQVS
VVRIPVLRVGDSSKVSVVRVHTKDGSATSGEDYHPISEELVFREGDTEHYVELEVLYDGV
REMREAFTVHLKPDENMVAETQLTKAIIYIEETNSMADVTFPSVPRVLSLLHYDGVDKHR
DSFPAAGYPVVCVTACNLKYPDYDKTGSICVSENINNTLTRYRWLVSAPKGPDGVTGPMR
EVDFDTFFTSSKLITLDSVYFQAGSRVQCAARAVNSDGDEGLELSSPVVTISTDEGMCQP
RVAGTVGAEPFSAKLRYTGAEDPDHPNLIKLTVTMPHIDGMLPVVSTRALSNFELTLSPD
GTRVGNHRCSNLLDYSEVKTRHGFLTDATKNPHVIGETAPYQYSAALRGAATLRFYRNLN
LEACLWEFTSYYDMSELLSDCGGSIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPAGAGGW
QHFDLQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINEQGRLVVNFRTEARF
RGLFVSRHPASALTSMVMCADHPGVTFNLSLVRSEPTYNQPIQQWTFVSDFAVRDYSGAY
TVKLLPCTSPPSLEFAVPPVCHPREPVTFDLDIRFQQVSDPVAAEFSLNTEMILLSKKTL
WLSDGSTGFGQNSDTAFSLGDTLYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVPKYD
PDRFEFGCLADAPSLLYRFKIIDKAQPEGQARSFGNVAFGALLAVDDPAALALVRQPGSD
GFSMDSTALFQVSAGREWYIHTIYTVRSRDNANRGIGKRSLEYHALGRHRRSADVQEIGA
DNNRGTNILHVTLNRGSHRGRSHGPEGDAFVPEGAVPRELGHAEDGADDRGDGPALIVGV
AVGVLLAVLVVAAATALVRRKRDAKDTPAASPSARPMMAQGLSDSSEV
NT seq
9327 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaatctctcctgctgcgggcgcgcgcgcgcgcgcgtctggcgccgcttttctc
gccctggcgctcctcctcgcaacaacgagtgacgcggagttccggaaccagcacggactg
tcctacgcgctgaggtccgagctgtccgaggacacagtgctggtggccaacaacggcatc
cgggtgcctttggggaggtcagtctttgtagatcccatcaacgacctggtgattcaagtt
cgacccggcgacaggtgcagcatcaccgtcctagacaatgaccctctgtcccagaggccc
ggagccctaaccccgaaaaagttcccttgtgaatttggcccgcacgatgtcaggtattcc
cactttggctcccgcagtccagccagggaccgggtgaaactgcagcttaggtacgacacg
cagacggacaccattgtgatccctttcatggtggaggtggaggtggttttcacgcagctg
gaggtgctgaccaaaaacctgccgatcaccgtggagaagccgctgggcaccagcaacccc
gtcgacaggcgtgttttggaatttacgttcgacaggcaggcgcagcgttgcagggtcacc
cctctgtccggtggcggcgtgctgcccaagtacggaagcctggtggacgggagcagcctg
gcgacgggaatgaccgactgcgacgacttcatccggatggacctccgctatcggcacaca
tttgcgttgaagtcgccgagcagagatcacatccccgtggtggtggagctgcaagacaag
gagggcaacctactcaagcaggagttcttccaaatcttggtgaggattaaagagggcgag
gagaacacggcgcccaagcccagcttcgtggccatgatgatgatggaagtggaccagttc
gtcatgacggccctgaccggcgacatgctggctgccgaggacgccgaatcggaccccgat
gagttaattttcaacatcacgtcgccgttgtcctacgaggagggttacattgtgagcaca
gacgacaggaatttacccctgacctccttttaccagggcgacctcaaagacttcaagatc
gcctacaagccccctgcggtggactcagacagcgaacgaattttccagctggagtttgag
gtggtggacacggaaggggccgtgtcggaccctttcgctttcatgatcgtcgttaagccc
atgaacactttggcccccgtggtgaccaaaaacaccggtcagttgctgtacgaggggcag
tcccggccattgtccagctctcaaaatctcgaaatcagtgatgaagacaatctggacaaa
gtcagaattgcggtgattgacggcctgaagcacggggacttaaccgtgccgggctccggc
aggaagtttttcacgccggccgacctcaatgccggccaagtcatttatcagcacgacggc
agcgacacgtacagtgataacatcgtttttcgaatgacggacggctcgcatgaggtggag
tttctgttccccatcaccgtcgttcccaccgacgacgagccgccgatagtcaacgccaac
accggtttggttctcttcaagaaccaaatgatgcccatctcttccctcgtgctcagcgcg
gcggacatcgactcggaggactccaccatcaaattcacaatccagccccccttttccacc
ttcgggcaggtgctgctgcgccaggccgaggccccggaggacccgtcgacatggaagttc
aacactgaggaggaaatgtacgagaaggcggtgactgaatggctgcagcgggacgtgact
gatggcaaagtcttttacaagcacattggaccacacagcgccagcacgatcacggatcag
ttcaggtttcacgttcaagatgacaacgacccccccaaccggtcagaggagagctcgttc
gttatcaaagtcctccctgtggatgacctcccacctgagctgcacccggaggccacgcta
caaatgaccgtgcatgagtatcagctcacgcacttgcggaagaagttcatacgctacacg
gatctcgactcggaggatcgcgacctcagatacgccgttgcccagccgccgacggacacg
gacgaaaacagccccgttgtactgggcgctctggttctgaccgaagaccccaaagttgaa
gtcacaactttcactcaggctcaaatcaaccatcacaaaatagcatacaaaccgcctgat
ctggagctgggaatcaccacgcacattttgcagttcagatacacggtggaggatgtttcg
gggaacggcgttgaaggcgttttcacgatattccttaagcccgtggacaacaagccgccg
cagattaccaactctggattcacagtgctggagcggggcgcacataccattaccactact
gagctgtacacctcagactcagacacagacagcaaactgatctcttttactgtttctcag
cctcccctgcatggccacgtgcaattcatgttcacggacatgacgagaggggacgctttt
agcctgaaagacattgacaacggtcgagtttcttatttacacaacggggatgaatcaata
gcagactcaatacaaatagatgtcagcgatggagtccacgtggtcccaattaaagtgaag
atcaacgtgaagccaattgatgatgagatcccggctatcagcctcccggcaggtacaatt
ggctcctctattgatgtgctggagaacggggccactgaaattaccagtaacgtcattcag
gggagagacgaggacacggacgacctccgtttgaccttcatcttggaggacccgccgtcg
ttgggtgaaattctggttcgagggctcccgtcgtccgtgttcacccaggccgatatcatc
aacggccatgtgatctacactcacaccagcggtgaattgggttttaccaccaaagaggat
attttcaatttaactctgacggacatgtctgatgaatggacggtgggaggtaataagatt
actggtgtcagagtgcatgtgaccattctaccactggacagccaggccccacaggttttt
gtgggcaaactattttccgtccccgagggcgagaaaaatgctattcggactcatcatatc
agtgccgatgatatcgacaccctcatcgaagacctcctgtgcaccatcatcgtgcagccg
acttcgggctacgtggaaaatatctccccggcccctggctcggaaaaatccaggtccggc
gtggctgtcagcgccttcaccatcaaggacattcagcagcatcacatttactacgttcaa
agcatccacagaggcgtggagccggtggaggacaggtttacattcagatgctctgacggc
atcaatttctcagagaggcactttttccccatttccatcgtcccggctaacgacgaaaag
cccgagatttacatgagggagttcgtcgtcatggagggcatgaacatagtcatcgacacc
cccattttgaacgccgctgacgccgacgtcccctccgaccagctcactttcatcatcgcc
agaccccccgcgcacggatttattctcaatcagctcaccacgggcacggtgcccgtctcc
aacttcaccttggagcagatcagcgaggcctccagcgttgtgtacgagcacgacgactcg
gagaccacgcaggacagcttcgatgtgctcctcactgacggaaagttccgcgtgcagaaa
acggcgatcgtcatgataatccccgtggacgatgagacgcccaggatggcgatcaacgac
ggcctcgacgtcgaagtgggcgacgtgaaagtcatcaacggtgacattttaagagcgacc
gatctggactcggaggacagcacgctgacctatatcattcgctacgtgcccagacagggg
tatttgcagaaaacaatgtcaaacgggatgctgcacaacataaccgtggggatgaatttc
acccaggaagatttggaccagggtttgatcatctacgtgcacaacggccaagagggagtt
cgcgacctcatcaaattcgacgtgacggacggctacaaccatttgattgacagatacttt
tacgttacagtgggtggcattgacatggttttcccttacgtagtgagtaaaggtgtgtcc
ctgaaagagggtggcagggtcactctgacgacagacctgctcagcaccagtgatcacaac
agcccggatgagcatttagtttttacaatcactcgcgctccggtgcgcggccacctggag
tgcacggacacgcctggaatgcctatctcgtccttcacgcagcttcagctggctggcaac
aaagtctactacatccacacagccgaggacgaagtcaaaatggacagctttgagtttgaa
gtgaccgacggctacaaccccgtgttccgcacgtttcgcatagccattacggatgtagac
aacaaaaagccggtggtcacggtgcacggcctggtggtgatggagggtgagaacaagctc
atcacgcctttcgagctcacggcggaggacagagacacggcagaccgactcctgaagttc
acggtcacccagatccccgttcacggccgcctgctcttcaacgccacccggccggtcgcc
tccttcaccgagcaggatctgaacgacaacatgatcagttacaagcatgacggcaccgag
agcgcagaggatagcttctccttcaccgtcacagacggcacccacaccgacttctacctc
ttccccgacactgtcttcgagacccgaaagccccaggtcatgaagattagcatcctccct
ttggacaacggcgtgccacagatcggggtgaacaagggtgccccgacgttgcgggttcta
gacggtggccacctgggctttgtgatgaccagcaaatccctcagagcagaagaccgagac
agcacgcagggttctgtgctctttaggattaccaacgcaccgaagcatggctacctgatc
aacacgggaaaaggaaacgccaccatcaccactttcacacaagcggacatcaacaacatg
aacatctgctacatcctgacgaagggagacgacgccacgaacgacatcttccatttctct
atcgaagacagcggaggcaacaaactgaggaaccagcaatttcgtctcaactgggcctgg
atctcattggagaagaagcactacgtggtggacgaggaggtcaagttcctggaggtggtg
ctaaaacggcgaggctacctgggggagacctcctttgttagcatcggcaccaaggacgga
acggcgctcaaggacaaagatttccgcggcaaagctcagaagcaggtgcaattcaacccg
ggccagaccgcggccacctggaaagtccgcatcctgtcagatagcgagtacgaggtgtcc
gagaccttccagattgtcctctccgagcccgtgatggcagtccttgaattcccagaggcc
gcagacgtggagattgtggaccctggtgacgagtcgtccgtgttcatcccggcggcggcg
tacagcatcgaggaggacgtcggcgagctgttggtgccggtcaggcgcagcggcgacgtc
ggccaggagctgatggtggtctgcttcacccagcaagtgtcggccgcaggcaccgtgccc
accaccgtgctgtcctactcggactacatctcgcggccggaggaccaccgcagcgttctg
cgtttcgacaagggcgagctggagaagccgtgccgcgtggtgatcatcgacgactccctg
tacgaggccgaggagagcttcaacctcaccctcagcgtgcccgtggggggccgcctgggc
gcccgcttccccagcaccaggatcaccattgtgcctgacatggatgacgcccccgtcttc
tactttggcaacaccaaccaccacgtggacgagagcgacggcttcgtggaggtgcaggtg
tggaggacgggaagcgacctgtccaaagccggcgccgtcacggtgcgctcccgaaagacg
gatccggtctcggcgcaggccggagcggattacgtggggatcagccggaatctggacttc
gcgccgggcgtcgccatgcagacgttccgcgtgaccatcctggacgacctgggccagccg
gtgctggagggccccgagacgtttgagctggtgctgcagatgcccgtcaacggggtcctc
ggggaacccggcaaggccggcatcctcatcaacgactccgtgtcagacctgccaaaggtg
cagttccgtgacgctctctacgtgggccacgagaagtcggggcggatttcggcgaccgtg
taccgtagcggcgacatcggccacaagtccaccgtgcgctgctacagcaggcaagggacg
gcccaggtcatgatggacttcaacgagcggcccaacaccgacgcctccgtcatcactttc
ttaccaggtgaggtcgagaagccttgtgacctggagttggtggatgacacggagcacgag
gaagaggaggagctgcgtctcgtgcttggaagcccaaaaagcgattcgcccttcggcgct
tccatcggacgtcaaaacgaaacgctcattagaataaaagatgatgctgacaaggccgtc
attaagtttggcgagaccaaattcagcgtgaacgaacccaaggaacgcggccaagtatct
gtggtgagaatccccgtgctgcgcgtgggggactcctccaaggtgtcagtcgtccgagtc
cacaccaaagatggatccgccacctcgggcgaggactaccatcccatatctgaggagctc
gtgttcagggaaggtgacacggagcactatgtggagctggaggttttatacgacggcgtc
agagagatgagggaggccttcaccgtgcacctgaaaccggacgagaacatggtggcagag
acacagctgaccaaagccatcatctacatcgaggagaccaacagcatggcagatgttacc
ttcccctcggtgcccagggtgctttctttgcttcattacgacggcgtggacaagcacaga
gactctttccccgcggccggctacccggtcgtttgtgtcaccgcgtgcaacctcaaatac
ccggactacgacaaaacgggctccatctgcgtgagcgagaacatcaacaacactctgacg
cgctaccgctggctcgtcagcgcccctaagggcccggacggcgtcaccggcccgatgcga
gaagtagacttcgacaccttcttcacctcgtccaagctcatcacgctggactcggtctac
ttccaggccggctccagggtgcaatgcgccgccagggccgtcaactcggacggcgacgag
gggctggagctcagcagccccgtggtgaccatcagtacggacgagggcatgtgccagcct
cgcgtggcgggcacggtgggagccgagcctttctctgccaagctgcgttacaccggagcc
gaggaccccgaccatcccaatctcatcaagctgactgtcaccatgcctcatattgacggt
atgctacccgtggtgtccactcgcgccttgtcgaactttgagctcaccctcagcccggac
ggcacccgcgtgggcaaccaccgctgctccaacctgctggactactccgaagtcaagacg
cgccacggcttcctcaccgacgccaccaagaacccgcacgtgatcggcgagacggcgccc
taccagtacagcgccgcgttgaggggcgccgccacgctgcgcttctaccgcaaccttaac
ctggaggcgtgtttgtgggagttcaccagctactacgacatgtccgagctgctcagtgac
tgcggcggaagcatcggcactgatggacaggtcctgaacctggtgcagtcctacgtgaca
ctgcgcgtgccgctccacgtgtcctacgtgttccactcgccggcgggcgcaggcggctgg
cagcattttgacctgcagtcggagctgaggctcaccttcgtgtacgacaccgccatcttg
tggagggacggcatcggcagcccgccggaggcggagctccaaggcgcgctctacccgacc
agcatgcgcattaacgagcagggacgcctggtggtcaacttccgcaccgaagcccgattt
agaggcctgtttgtctccaggcatcccgcctctgcgctcacctccatggtcatgtgcgcc
gaccaccccggtgtgacgttcaacctcagcctggtgcgcagcgagcccacctacaaccag
cccatccaacagtggaccttcgtctcggactttgccgtacgcgactactctggcgcgtac
acggtgaagctgctgccgtgcacgtcgccgcccagcctggagttcgccgtcccgcccgtg
tgccacccgagagagcccgtcacctttgacctggacatccgatttcagcaggtgagcgat
ccggtggctgcagagttcagtctgaacacggagatgatcctgctctccaaaaagactctg
tggctctccgacggctccacgggcttcggccagaacagcgacacggctttctcgctaggc
gacacgctctacgggcgcgtcatggtggacccggtgcagaacctgggcgactctttcatc
tgcaacatcgagaaggttttcctgtgcacgggcgccgacggctacgtgcccaagtacgac
cccgatcgctttgagttcggctgcctggctgacgcgccgtcgctcctctacagattcaaa
attatcgacaaagcccagcccgaaggccaggccagatcttttgggaacgtggccttcggc
gccctcctagcggtggacgacccggccgctttagctctggtcagacagcctggatcggat
ggattcagcatggattccaccgccctcttccaggtgtccgcgggccgagagtggtacatc
cacaccatctacaccgtccgctcccgggacaacgccaaccggggcatcggcaagcgcagc
ctggagtaccacgcgctcggccggcaccgcaggtccgccgacgtccaggaaatcggcgcc
gacaacaaccgcggcaccaacatcctccacgtcacgctgaaccgcggcagccatcgcggg
aggagccacggccccgagggggacgccttcgtccccgagggggcggtcccgcgtgagctc
ggccacgccgaggacggcgccgacgaccggggcgacgggccggcgctgatcgtgggcgtg
gcggtcggggtgctgctcgccgtcctggtcgtcgcggcggcgacggcgctggtgcgacgc
aagcgggacgcgaaggacacgcccgccgcctcgccgagcgcccggccgatgatggcgcaa
ggactcagcgacagctccgaggtctga
DBGET
integrated database retrieval system
