Phycodurus eques (leafy seadragon): 133404952
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Entry
133404952 CDS
T09682
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133404952 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133404952 (prpf8)
Spliceosome [BR:
pee03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
133404952 (prpf8)
Complex C
U5 SnRNP specific factors
133404952 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
133404952
NCBI-ProteinID:
XP_061537478
LinkDB
All DBs
Position
7:22356992..22374958
Genome browser
AA seq
2339 aa
AA seq
DB search
MAVAFPFRGVPAGIPPPGVPLPPQVPDYMTEEKLQEKARKWQQLQAKRYSEKRKFGFVDA
QKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDV
PVLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPL
DYADNILDVEPLEAIQMELDTEEDSPVVEWLYEHQPLKDTTKFVNGTTYRRWQFSLPMMS
TLYRLANQLLTDLVDYNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEF
NDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLI
NPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKETPLYTDNTANGIALLWAPRPFNLRSG
RTRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSF
KATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERK
KSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKY
KLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLL
ARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSES
WRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNL
GRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDT
KLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGI
EFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWC
QGINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVV
INYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQD
TATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPR
DARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRI
LPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTF
TKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVF
YTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWE
SEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGW
RVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFP
TWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLD
LTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHP
RKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDI
ERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSGYGNWFPGSKPLIQQAMAKIMKA
NPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEG
NLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEE
QPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVL
FNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEW
IKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQ
SQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDD
IKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQT
VHLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITC
SFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQ
VSWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYG
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgccttccctttccgtggagttcctgcagggatcccacccccgggtgtcccc
cttccaccacaagtcccagactacatgactgaggagaaactccaagagaaagcgaggaaa
tggcagcagttgcaagcaaagcgctactcggagaagcgaaagtttggttttgtggacgct
cagaaggaagacatgcctcctgaacatgtccgtaagatcatcagggaccatggtgacatg
accaataggaagtttcggcatgacaagagggtctacttaggtgccctcaagtacatgccc
catgcagtgcttaaactgctggagaacatgccaatgccttgggagcagatcagagatgtg
cccgtactctaccacatcactggagccatttcatttgttaatgaaataccttgggttatc
gagccagtttacatcgcccagtggggcaccatgtggatcatgatgcggcgagagaaacgt
gatcgtcgacacttcaagaggatgcgtttcccgccatttgatgatgaggagccgccgctg
gattatgcagacaatatccttgatgtagaaccactggaggccattcaaatggagctggac
acggaggaggatagtcctgtcgtggaatggctgtatgagcaccagcccctgaaggacact
acaaagtttgtgaatggcaccacttaccgtcgatggcagttctcactccccatgatgtct
acgctgtaccgcttggccaatcagctgctgacagacttggtggattacaactacttctac
ctgtttgaccttaaggccttcttcacttccaaggctttaaatatggccatacccggagga
ccaaaatttgagcctctggttcgagacattaatctccaggatgaagactggaatgaattc
aatgacatcaacaagatcatcatcagacagcctatcaggaccgagtacaaaattgccttc
ccctacctgtacaacaacttgccacaccatgtccacctcacctggtaccacacaccaaat
gtggtgttcatcaagacggaggacccagatcttccagcgttttactttgatccactgatc
aatcccatttcacacagacattcagtcaagagtcaagagcctctacccgatgatgacgag
gagtttgagcttcctgagtttgtagagcccttcctcaaggagactcccctctacactgac
aacacagccaatggcattgctttgctatgggcgccgagacctttcaacttgcgttcaggt
cgcaccaggagagccatagatatccctctcatcaagaactggtatcgtgaacactgccct
gcaggacagccagtgaaagtacgtgtgtcataccagaaactgctgaagtactatgtgctc
aatgctctcaaacacagaccacctaaggcccagaaaaagaggtatctgttccgttccttc
aaggccacaaagttctttcagtccaccaagcttgactgggtggaggtgggcctgcaggtc
tgccgacagggttacaacatgctcaatctgcttatccaccgaaagaacctcaactacctg
catttggactacaacttcaacttgaagcctgtcaagacactgaccacaaaggaacgtaaa
aagtcaagatttggcaatgctttccacctctgtagagaggtgttgcgactcagcaagctg
gtggtggacagccatgtacaatacagattgggaaatgtggacgcgttccagttggctgat
gggctgcagtacatctttgctcatgtgggacagctgactggcatgtaccgctacaagtac
aagctgatgagacaaatccggatgtgcaaagatctgaaacatctcatatactaccgcttc
aatactggtccagttggaaagggaccaggttgtggcttttgggcacctggatggagggtg
tggcttttcttcatgaggggcatcacaccactgttggagaggtggcttggaaatctgctg
gccaggcaatttgaagggcgtcactccaagggtgtggccaagactgtgaccaaacagcgt
gtggagtcgcactttgacctggagttgcgtgccgctgtgatgcacgacatcttggacatg
atgcctgagggcatcaaacagaacaaagccagaaccatcctgcagcacctcagtgagtct
tggaggtgctggaaggccaacattccgtggaaggttcccggcttgccaacacccattgag
aacatgatcctgcgctacgtgaaggccaaagctgactggtggaccaacacggcccactac
aaccgtgagcgaatccgccgtggggccactgtagacaagacggtctgcaaaaagaacttg
ggaagactgacccgtttgtacctgaaggctgagcaggagagacagcataactacttgaag
gatggtccctacatcacagctgaggaagctgttgccatttacaccacaactgttcactgg
ctcgaaagtcgacgtttctcgccaatccccttccctccactgtcatacaaacatgacacc
aagctgttaatcctggccctggagaggctcaaagaggcttacagtgtaaaatctcgcttg
aaccagtctcagagagaagagcttgggctgatcgagcaggcttatgacaaccctcacgaa
gctctgtccaggatcaagcgtcacctgctcacacagcgagccttcaaagaggtgggtatt
gagttcatggacctttacagccacctggtgccggtgtatgatgtagagcccctggagaag
atcacagatgcctatcttgatcagtatctgtggtatgaagcagacaagaggcgactcttc
ccgccctggatcaaaccagctgacactgaaccacctccattgctcgtctacaagtggtgc
caaggcattaacaacttgcaggatgtttgggaaactgcagaaggagagtgcaacgtgatg
ttagagtcacgctatgagaagatgtacgagaagattgatttgacgttgctcaacaggcta
ctgcgtcttattgtcgaccacaacatagctgattatatgacagccaagaacaatgtggtc
atcaactacaaggacatgaaccatacaaactcttacgggatcatcaggggactccagttt
gcctcgttcattgtacagtactacggtctggtaatggatctgctggtgctcggtctgcac
cgtgccagcgagatggcaggtccaccccaaatgcccaatgacttcctcagtttccaagat
acggcaacagagagtgcccacccaatccggctgtactgccgttacattgaccgcatccac
atcttcttcaggttttctgctgatgaggcaagggacctcattcagaggtacctgacggag
caccctgacccaaataatgagaacattgtgggctacaacaataaaaaatgctggccccgt
gatgcccgcatgagactgatgaagcatgatgtcaatcttggtcgtgctgtcttctgggac
atcaagaaccgcctgccaaggtcagtgaccacagtccagtgggagaacagctttgtgtca
gtctacagcaaagacaaccccaacctgctcttcaacatgtgcggctttgagtgccgcatc
ttgcccaaatgtcgaacaagctatgaggagtttacccataaggatggtgtctggaatttg
cagaatgaggttaccaaagagaggacggctcagtgtttcctgcgtgtggatgatgaatca
atgcagcgcttccacaacagggtgcgacagatcctaatggcctcaggctcaaccacgttc
acaaagattgtaaacaaatggaacacagctcttattggcctgatgacctacttccgtgaa
gcagtggtcaacacccaggagctgctggatctgctggtcaagtgtgagaacaagattcag
acacgtatcaagattgggctgaactctaaaatgcctagccgttttccgcctgtcgttttc
tacactcccaaagagttgggcggcctgggcatgttgtccatgggtcacgtgctcatacca
cagtctgatctgcgttggtccaagcagacagatgtgggaatcacccacttcaggtcggga
atgagtcacgaagaggaccagttgattccaaatttgtatcgttacattcagccatgggaa
agtgagttcatcgactcccagagggtgtgggctgagtatgccctcaagaggcaggaggcc
attgcacagaacaggcgactgaccttggaggatttagaagactcgtgggacagaggaatc
ccacgtatcaacacgcttttccaaaaggacagacacacgctggcctatgacaaaggctgg
agagtcaggactgattttaaacaataccaggtgctgaagcagaatccgttctggtggacc
caccagaggcatgacggtaaactgtggaacctcaacaactaccgcacagacatgatccag
gctctgggtggcgtggagggcatcctggaacacacactcttcaaaggcacttactttcca
acctgggagggtctcttctgggagaaggcgagtggctttgaagaatctatgaagtggaag
aagctgacaaatgctcagagatctggtctcaaccaaatccccaaccgtcgctttactctc
tggtggtcgcccacaatcaacagagccaatgtatatgtgggtttccaagtgcaacttgac
ctaaccggaatcttcatgcatggaaaaattccaaccctgaagatctcactcattcagatc
ttcagagctcacttgtggcagaagatccatgagagcattgtcatggatctttgtcaggtt
tttgaccaggagctagatgctctagagattgagactgtgcagaaggagaccatccacccc
aggaagtcgtacaagatgaactcatcctgtgctgacattctgctttttgcgtcctacaag
tggaacgtctctcggccgtctttgctggcagattcaaaggatgtgatggacagcaccacc
acacaaaagtactggattgacattcagctgcgttggggtgactatgactcacatgacatt
gagcgctacgccagggccaagttcttggactacaccaccgacaacatgagtatctatcct
tcccccactggagtgctcattgccattgatttggcttacaacctccacagtggctatgga
aactggttcccaggcagcaagcctttgatccagcaggccatggccaagatcatgaaggcc
aaccctgccctgtatgtgctcagggagcgcatccgcaagggtctgcagctctactcctca
gagcccactgagccctacctgtcctcacagaactacggtgaacttttctcgaaccaaatc
atctggtttgtagatgacaccaatgtctacagagtcaccatccacaagacctttgagggc
aacttgaccaccaaacccatcaatggagccattttcatcttcaaccccaggactggacag
ctcttcctcaagatcattcacacatctgtgtgggctggacaaaaacgtctgggacagctg
gctaaatggaagacagctgaagaagttgccgcattgatccgctctctgcctgtggaggag
caaccgaagcagatcattgtgacaaggaagggaatgctggaccctctggaggtccacttg
cttgacttccccaacattgtgatcaagggctctgagttacagctgcccttccaggcctgt
ctgaaggtggagaagtttggtgacctgatcctgaaagcaaccgagccccagatggtcctg
ttcaacctttacgatgattggcttaagaccatttcgtcttacacagccttctcccgactc
atcctgatcctcagagcactccacgtcaacaatgaccgtgccaaagtgatcctcaaaccc
gataagaccaccatcactgagcctcatcacatttggcccactctcactgacgaggaatgg
atcaaggtggaagtgcaacttaaagacctcattctggctgactacggcaaaaagaacaat
gtgaacgtggcgtcattgactcaatccgagatccgtgacatcatcctgggtatggagatc
tctgctccctcgcagcaacgccagcagattgctgagattgagaagcagaccaaagaacag
tcgcagctcactgccacacagacgcgcaccgtcaacaaacacggcgatgagatcatcact
tccaccacatccaactacgagacgcagaccttctcctccaagacagaatggagggtcagg
gctatatctgctgccaacctccatctccgcaccaaccacatttacgtgtcatctgatgac
atcaaggagacaggatacacctacatcctgcccaagaatgtcctcaagaagttcatctgc
atttcagatttacgtgcacagattgcaggctacctttacggcaccagcccacctgacaac
ccacaagtgaaggagatccgttgtatcgtcatggttcctcaatgggggacgcaccagact
gtccacctgcccaaccagctgccaggacatgaatatctgaaagaaatggaacccctcggt
tggatccacacgcagcctaatgagtcaccacagctgtcccctcaggatgtgaccacccat
gccaagatcatggctgacaatccctcttgggatggagaaaagaccatcatcatcacatgc
agcttcacgccaggctcatgcacgctgacggcctacaagttgacgccgagcggctacgag
tggggtcgacagaacacggacaagggtaacaaccccaaaggctacctgccgtcccactac
gagagagtccagatgctgctctctgaccgcttcctgggcttctttatggtaccaggtcaa
gtttcctggaactacaatttcatgggtgtgcgccatgacccgaacatgaaatacgacctg
caactggccaaccccaaggagttctaccacgaagtccatcgaccatcgcacttcctaaac
tttgcctcgttacaggagggtgaaatctacaatgctgaccgtgaggatatgtatggttga
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integrated database retrieval system
