Phycodurus eques (leafy seadragon): 133405085
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Entry
133405085 CDS
T09682
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133405085 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133405085 (exosc5)
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133405085 (exosc5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
133405085
NCBI-ProteinID:
XP_061537722
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All DBs
Position
7:8551175..8555844
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AA seq
220 aa
AA seq
DB search
MEERSSSTVTLREFGCEQNLLSRPDGSASFIQGDTSVLAAVYGPAEVKVSKEIYDRATLE
VIIQPKVGLPSVKERAQEQCVRESCEASLLLSLHPRSSLTLVLQELHNDGSLLSCFLNGA
CMAMMDAGLPMSCLFCGVTCAIHADGRIITDPTAAQEAESRALMTFAIDSKKRRVMMTST
KGSFSVHEMQQCIAVSQTASEKIFSFHRESLRRRYSKSVV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgtagttcgtccacagttaccctgagagagtttggttgtgagcaaaattta
ctttctcgtcctgacggttcggcgtctttcatacaaggtgacacaagcgtactggctgca
gtttacggcccagctgaagtcaaagtaagtaaggagatttatgaccgggcaacgctggag
gtgatcatacaacccaaagttggacttccaagtgtgaaggagcgtgctcaagaacagtgt
gtgcgggaaagttgcgaggcgtctctgctgctgtcccttcaccctcgctcgtccctcacg
ctcgttttacaggagctccataatgacgggtctctgttgtcctgcttcctaaacggcgcc
tgcatggcaatgatggacgccggcttgccgatgagttgcctgttctgcggcgtcacctgc
gccatccatgcggacggaagaatcatcactgacccgactgctgctcaggaagcggagagt
cgagcgctgatgaccttcgccatcgacagcaaaaagcggcgagtgatgatgacctcaact
aaaggatcgttttcagtgcacgagatgcagcagtgcatcgctgtcagtcaaacagcatcc
gaaaagatcttcagcttccacagagagtcactcaggcggcgttactccaaaagcgtcgtc
tga
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