KEGG   Phycodurus eques (leafy seadragon): 133405122
Entry
133405122         CDS       T09682                                 
Symbol
hmgb1b
Name
(RefSeq) high mobility group protein B1b
  KO
K10802  high mobility group protein B1
Organism
pee  Phycodurus eques (leafy seadragon)
Pathway
pee03410  Base excision repair
pee04140  Autophagy - animal
pee04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:pee00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    133405122 (hmgb1b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    133405122 (hmgb1b)
  09143 Cell growth and death
   04217 Necroptosis
    133405122 (hmgb1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pee03036]
    133405122 (hmgb1b)
   03400 DNA repair and recombination proteins [BR:pee03400]
    133405122 (hmgb1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pee04147]
    133405122 (hmgb1b)
Chromosome and associated proteins [BR:pee03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    133405122 (hmgb1b)
DNA repair and recombination proteins [BR:pee03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     133405122 (hmgb1b)
   MMR (mismatch excision repair)
    Other MMR factors
     133405122 (hmgb1b)
Exosome [BR:pee04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   133405122 (hmgb1b)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 DapB_C Beta-prop_IFT122_1st DUF6150 Dicty_REP PLC-beta_C
Other DBs
NCBI-GeneID: 133405122
NCBI-ProteinID: XP_061537782
LinkDB
Position
7:28865137..28876175
AA seq 201 aa
MGKDPKKPRGKMSSYAYFVQTCRGEHKKKHPDASVNFAEFSKKCSERWKTMSQKEKGKFE
DMAKQDKVRYDAEMKNYIPPKGQKMKRIKDPNAPKRPPSAFFLFCADFRPKVKGEHPGLS
IGDMAKKLGEMWNSSSMEDKQPYEKKAAKLKEKYDKDIVAYRTKGKVDSSSAAAAAAADD
DEDEDEEEEGDDDEDDDEDDE
NT seq 606 nt   +upstreamnt  +downstreamnt
atggggaaggatccaaagaagccccggggcaaaatgtcctcctacgcctactttgtgcaa
acatgccgaggggagcacaagaagaagcatcccgacgccagcgtcaacttcgcagagttc
tccaagaaatgctccgagcgatggaagacaatgtcccaaaaggagaagggcaaattcgaa
gacatggccaagcaggacaaggtgcgctacgatgcagagatgaagaactacatccctccc
aagggacagaagatgaagcggatcaaggacccaaacgccccgaagagaccaccgtctgcg
ttcttcctgttctgcgccgacttccgccccaaggtgaaaggcgagcacccgggcctgtcc
atcggcgacatggccaagaagctcggcgagatgtggaacagctcgtccatggaggacaag
cagccctacgagaagaaggccgctaaactgaaggagaagtacgacaaggatatcgtggcc
tatcgcacaaagggcaaagtggattccagctcggcggcggcggccgcagcagcggacgat
gatgaggatgaagatgaggaagaggagggcgacgacgacgaagatgacgatgaggatgat
gagtag

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