Phycodurus eques (leafy seadragon): 133405122
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Entry
133405122 CDS
T09682
Symbol
hmgb1b
Name
(RefSeq) high mobility group protein B1b
KO
K10802
high mobility group protein B1
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03410
Base excision repair
pee04140
Autophagy - animal
pee04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133405122 (hmgb1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133405122 (hmgb1b)
09143 Cell growth and death
04217 Necroptosis
133405122 (hmgb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pee03036
]
133405122 (hmgb1b)
03400 DNA repair and recombination proteins [BR:
pee03400
]
133405122 (hmgb1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pee04147
]
133405122 (hmgb1b)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
133405122 (hmgb1b)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
133405122 (hmgb1b)
MMR (mismatch excision repair)
Other MMR factors
133405122 (hmgb1b)
Exosome [BR:
pee04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133405122 (hmgb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
DapB_C
Beta-prop_IFT122_1st
DUF6150
Dicty_REP
PLC-beta_C
Motif
Other DBs
NCBI-GeneID:
133405122
NCBI-ProteinID:
XP_061537782
LinkDB
All DBs
Position
7:28865137..28876175
Genome browser
AA seq
201 aa
AA seq
DB search
MGKDPKKPRGKMSSYAYFVQTCRGEHKKKHPDASVNFAEFSKKCSERWKTMSQKEKGKFE
DMAKQDKVRYDAEMKNYIPPKGQKMKRIKDPNAPKRPPSAFFLFCADFRPKVKGEHPGLS
IGDMAKKLGEMWNSSSMEDKQPYEKKAAKLKEKYDKDIVAYRTKGKVDSSSAAAAAAADD
DEDEDEEEEGDDDEDDDEDDE
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggatccaaagaagccccggggcaaaatgtcctcctacgcctactttgtgcaa
acatgccgaggggagcacaagaagaagcatcccgacgccagcgtcaacttcgcagagttc
tccaagaaatgctccgagcgatggaagacaatgtcccaaaaggagaagggcaaattcgaa
gacatggccaagcaggacaaggtgcgctacgatgcagagatgaagaactacatccctccc
aagggacagaagatgaagcggatcaaggacccaaacgccccgaagagaccaccgtctgcg
ttcttcctgttctgcgccgacttccgccccaaggtgaaaggcgagcacccgggcctgtcc
atcggcgacatggccaagaagctcggcgagatgtggaacagctcgtccatggaggacaag
cagccctacgagaagaaggccgctaaactgaaggagaagtacgacaaggatatcgtggcc
tatcgcacaaagggcaaagtggattccagctcggcggcggcggccgcagcagcggacgat
gatgaggatgaagatgaggaagaggagggcgacgacgacgaagatgacgatgaggatgat
gagtag
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integrated database retrieval system