Phycodurus eques (leafy seadragon): 133405200
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Entry
133405200 CDS
T09682
Symbol
ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03022
Basal transcription factors
pee03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133405200 (ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
133405200 (ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133405200 (ercc2)
03036 Chromosome and associated proteins [BR:
pee03036
]
133405200 (ercc2)
03400 DNA repair and recombination proteins [BR:
pee03400
]
133405200 (ercc2)
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133405200 (ercc2)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
133405200 (ercc2)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133405200 (ercc2)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
133405200 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
UxuA
Motif
Other DBs
NCBI-GeneID:
133405200
NCBI-ProteinID:
XP_061537947
LinkDB
All DBs
Position
7:17714700..17733410
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYH
RAFPQEVTKLIYCSRTVPEIEKVVEELRKLMEFYAKETGERNNFLALALSSRKNLCIHPE
VSSLRFGKEVDGKCHSLTASYIRAQNHINPNQPVCRFYEEFDAVGRQVPLPTGIYNLDDL
KDFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKQSVVVFDEAHNID
NVCIDSMSVNITRRTLDRCQGNVDTLQNTIHKIKETDAAKLKEEYRRLVEGLKEANVARE
TDVYLANPVLPDEILKEAIPGTIRTAEHFVGFLKRFMEYLKSRLRVQHVVQESAPQFLKD
IFDKVCIDRKPLRFCAERLQSLLRTLEIADLTDFSAVTLISNFATLVSTYSQGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVIITSGTLSPLDIYPRILDFRPVTMAS
FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAVVPDGIVAFFT
SYVYMENIVASWYEQGILENIQKNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHISDGSLNLTVDETVQLSKHF
LRQMAQPFRQEDQLGLSLLTLEQLQSEDMLKKIAQMAHQS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacatcgacggtttgttggtgtatttcccctacgattacatctatcctgaa
caatactcgtacatgctggagctcaagaggacgctggatgctaagggccatggtgtcctg
gagatgccgtcaggaactggcaagaccatctcactgttgtcgctcattgttgcgtaccac
agggcgttccctcaggaagtcaccaagctgatctactgctcccgaacagtccccgagatt
gagaaggtggtggaggagctgagaaagctgatggagttttatgccaaggagacaggcgag
agaaataacttcctggctctggcgctctcttcccgcaagaacctttgcattcatccggag
gtgagcagcctgcgctttggaaaggaggtggatggtaagtgtcacagtctgacggcgtca
tacattcgcgcacaaaatcacatcaaccccaaccagcctgtttgtcgcttctatgaggag
tttgacgctgtgggccggcaagtgccgcttcccaccggcatctacaacctggatgacctg
aaggactttggccgcaggaaaggatggtgtccctactacctggcacgctactcgatcctg
catgccaacatcgtggtgtacagctaccactatctgctggacccgaagatagcagacctg
gtgtccaaggagctggccaagcagtctgtggtggtcttcgatgaggcgcacaacatcgac
aacgtgtgcattgactccatgagtgttaacatcacaaggcggacgctggaccgttgccag
ggtaacgtggacacgctgcagaacaccatacacaagatcaaggagacggacgctgccaaa
ctgaaggaggaatatcgccgcctggtggagggcctgaaggaagccaacgttgcgcgggag
actgatgtctacctcgccaatcccgtactgccggacgagatcctaaaagaggccattccc
ggcaccatccggaccgccgagcattttgtcggcttcctgaagcgcttcatggagtacttg
aagtcccgtctgagggtgcagcatgtagtccaggaaagcgccccacagttcctcaaagac
atctttgacaaagtctgcatcgaccgcaagcctctcaggttttgcgccgagcgtctgcag
tcactgttacggacgctggagatcgcagacctcacagatttctccgccgtcacgctcatc
tccaactttgccacgctggtcagcacttacagtcaaggttttaccatcatcatcgagcca
tttgaagacagaacgccgaccatcgccaaccctgtgttgcacttcagctgcatggacccg
tctattgccatcaaaccagtctttcaaaggttccagtcagtcatcataacgtcggggacg
ctttccccactggatatctaccctcgcatcctggacttccggcctgtcaccatggcttct
tttaccatgacgctggctcgaacctgcctctgtccgctgattgtcgggcgaggaaacgac
caagtggctctgagctccaagtttgagaccagagaggatttcgctgtgattcgtaactat
ggcaacctgctcttggagatgtctgccgtggttcctgatggcattgtggcgtttttcacc
agctacgtctacatggaaaacattgtggcgtcctggtacgagcagggtattctggagaac
attcagaagaacaagttgatcttcatcgagacgcaggacgccgcagagaccagtatggca
ctggagaaataccaggaggcgtgtgagaacggcagaggagccatcctgctgtcggtggca
cgagggaaagtttcggaggggattgattttgtgcaccactttggccgagcagtcatcatg
tttggcgttccatatgtttacacgcagagtcgcatcctcaaggcccgtctggagtacctg
cgagatcagttccagatccgagagaacgacttcctcacctttgacgccatgcgacacgcc
gcgcagtgcgtcggccgagccatccgaggaaagaccgactatggactcatgatttttgct
gacaagcgttacgcccgagcggacaagcgcgggaagcttcctcgctggatccaggagcac
attagcgacggcagcctcaacctcactgtggacgagactgtgcagctgtccaagcatttc
cttagacagatggctcagcccttcagacaggaggaccagctgggtttgtctctgctgaca
ctggagcagctgcagtcagaggacatgttgaagaagatcgctcagatggctcatcagagc
tga
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