Phycodurus eques (leafy seadragon): 133405383
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Entry
133405383 CDS
T09682
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04510
Focal adhesion
pee04512
ECM-receptor interaction
pee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133405383
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133405383
09142 Cell motility
04820 Cytoskeleton in muscle cells
133405383
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pee04147
]
133405383
00536 Glycosaminoglycan binding proteins [BR:
pee00536
]
133405383
Exosome [BR:
pee04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133405383
Glycosaminoglycan binding proteins [BR:
pee00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133405383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133405383
NCBI-ProteinID:
XP_061538248
LinkDB
All DBs
Position
7:complement(31440786..31483524)
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AA seq
1756 aa
AA seq
DB search
MLVAWVSGGRVLPPPRLLFLLLLLLLLRGAPGDAETVCECSRKWPCHCDGVKGQKGEAGY
PGYDGLPGLIGYPGNEGSQGPEGQKGQHGFAGNVGLKGSRGLPGPSGFPGPPGLPGLPGR
EGTAGRAGLPGCNGTKGQDGFPAFRGIPGPLGPRGRAGPRGEKGDSQVFPDSPGIKGARG
PRGPEGDEGRSGEPGPPGSPGPAGPAGLPGRPGSPGLPGEKGQEGPNPVSRGPPGPKGDR
GPAGIPGQKGIKLYAEGPKELKGESGDAGVKGCAGRSGPAGRSGSKGERGRRGEPGSPGK
AGKDGAVGEMGQPGTPGPRGFVGPPGINGAQVSTKSCLFSTKHWISSTNRPHSVTFSTIF
FSPNKKDSYKKSHSRSVILQFLLLLFFLKKNTTLCLLSCVVSDKEKTLLTVCVFCVEGEK
GDFGPDGLPGEIFWKHAFAKGRTGTPGPAGPPGVPGEPGLVGFPGLQGEQGEGPTGPPGP
QGPPGFAGPKGERGETGPVVIGPPGPTGVSGGPGPEGEPGEPGLPDFVRGGVGPPGTKGG
KGVTGPAGTRGREGPEGEKGDMCLRCPDGGGPPGPPGEPGADGPKGALGVPGGKGERGLN
GIAGTPGPPGLFGVPGQPGRPGLTGDPGIMRRFGQKGEVGDPGDFGAPGLDGTDGLPGVP
GPKGSLGLKGNPGPQGPKGDRGPVGMTGFRGPTGQMGPPGPPRIGAPGPPGPPGNVGVWG
QPGDAGKPGEKGSPGKFITSPGDSGQKGVKGSSGNPGSEGVMGPPGNLGSVGLKGEKGQK
GFTVQGPPGFPGVKGFKGLSGDPGVPSYGSKGRSGPSGPPGRPGSKGNAGFGSPGQQGQS
GPRGEEGSVGAPGSQGPQGAVGLPGSVGQDGAPGPKGSRGLDGLPGPPGPIGPCFLGAPG
PVGQQGPMGVIGFTGSQGLKGEKGDPGLPGVGAIGPQGPFGVPGFDGTPGLQGSMGLKGQ
TGTAGQPGSPGIRGDSGPPGPRGRPGDLGKPGEPGSPGPKGQEGASGATGSQGPPGLQGY
RGETGPNGRQITVQMYGDPGDPGEPGPLGQTGAKGNQGTPGPPGLDGTNGRPGRAGPQGP
PGEPGRDGETGPPGSRGLPGNPGDLGKPGCKGEKGSAGPCGEPGFDGKEGLEGLKGAKGE
PSLPRPGPKGYHGEKGQLGCTGPAGQKGMPGDRGDFGPPGDRGPCGPKGNAGPPGYRGPP
GSPGEKACDGPPGVSGPPGPSGLTGNKGGPGDPGSSGPRGNQGQDGIPGPPGEKGAMGEP
GIGARGAEGTKGPPGCVGEKGPPGTCGHPGPSGPEGNQGCAGPPGLLDLLVFVEGRDPAQ
KETKEEKDRQENGGQEVSRGVEVPPGPPGSGLKGEKGPKGGIGNTGNPGCHGDPGPQGRP
GLDGAPGAPGLKGLMGDTGVTGPAGMKGDKGPAGIKGSRGPAGPTGKQGPRGKDVSREVV
VLAGDQGLPGGQGPPGQPGTPGTRGRTGAPGPKGVRGGGGRTGGPGFTGLKGDTGDRGDH
GIKGVAGPRGPTGAKGARGPPGPCVDAPEKDGFLFSRHSQNVLVPDCPSGSVEVYSGFSL
LFINGNNRAHGQDLGALGSCLPRFSTMPFLFCNTDSTCRYAARNDYSYWLSTDQSGLSTV
PFISGPLLKNYISRCTVCESSANVMAVHSQTRLLPECPSGWDSLWSGFSFVMETGVGAEG
SGQPLSSPGSCLENFRKIPFIECHGRGTCNFYTDSYSYWLAALDPRHMFSKPKPRTEAGD
LPEDLISRCRVCSKRL
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtggcgtgggtctcgggggggcgcgtcctcccgccgccgcggctgctcttcctc
ctcctcctcctcctcctcctccgcggagctccgggagacgccgagacggtgtgcgaatgc
agcaggaagtggccgtgtcattgcgatggggtcaaaggccagaagggggaagccggttac
ccgggatacgacggccttcctggactcattggttaccccggcaacgagggcagccaagga
cctgagggacagaagggtcaacacggcttcgcaggaaacgtcggcctgaaaggctctcgg
ggtcttccaggaccttctggttttccaggacctccgggtctcccaggacttccgggtcgg
gaaggcacggcgggccgagccggactcccgggatgcaacgggaccaagggtcaagacggc
tttcccgccttccgcggaatcccaggaccgcttggcccgcgaggtcgcgccggaccgcga
ggagaaaagggagactcgcaagtctttccggattctccgggcatcaaaggcgcacgagga
ccacgaggaccagagggagacgagggccggagcggagagccgggcccgccgggctcgccg
ggacccgccggacctgccggtcttcctggacgtcccgggtcgccggggttaccgggagag
aagggtcaagagggtcccaatccggtcagtcggggtccaccaggcccgaagggagatcgc
ggacctgccggaatacctggacaaaaagggatcaaattgtacgccgaggggcccaaggaa
ctcaagggcgaatcgggcgacgctggagtaaaaggttgtgctggacgttctgggccggcg
ggaagatcgggaagcaaaggcgagcgaggccggcggggggagcctggctcaccgggaaag
gcaggaaaggacggcgccgtgggagaaatgggccaaccggggacgccggggccccgtggc
ttcgtgggccccccgggcatcaacggggcacaggtaagtacaaaatcttgtcttttttcc
acaaaacattggatttcttcaaccaatagaccccatagtgtcactttttcaacaatcttt
ttttcacccaacaaaaaagattcctacaaaaagtcacattctaggtctgtgattttacag
tttttgttgttgttgttttttttaaagaaaaacacgactttgtgtttgttgagttgtgtt
gttagtgacaaagaaaaaacactcctgaccgtttgtgtgttttgtgtggagggcgagaaa
ggcgactttggtcccgatggtcttccaggcgagatattttggaagcacgcgttcgcgaaa
ggccggaccgggactcccgggcccgccggacctccaggagtccccggagagccaggactg
gtgggctttcccggactgcagggcgagcaaggggagggtcctacgggtccgccgggccct
caggggccaccgggtttcgcaggacctaaaggagagcgaggggagaccgggcccgtcgtc
atcgggcctccgggaccgaccggcgtctcgggaggtcccggacccgagggagaaccggga
gaacccggattaccagacttcgtgcgaggcggcgttggacctccgggcacgaaaggtggg
aaaggcgtgaccggacctgccgggacccgaggacgggaaggcccggaaggcgagaagggc
gacatgtgtttgcgctgtcccgatggcgggggtccgcccggacctccgggggaaccgggt
gcggacgggcccaaaggtgcacttggtgttccagggggcaaaggcgaaagaggtctgaac
ggtatcgctggaacaccaggcccaccgggcctctttggtgtcccaggacagccaggacgt
cctggtttaacaggtgaccctggcatcatgaggagatttgggcagaaaggggaagttggg
gacccaggagacttcggcgctccggggcttgacggtacagatggacttcctggcgttcca
ggacccaaaggcagtctgggactgaagggaaaccctggacctcaaggacccaaaggtgac
aggggtcctgttggaatgaccggtttcagagggccaacgggacaaatggggccaccgggg
cctccacgcatcggtgctcctggaccgccaggaccaccggggaatgtgggtgtatggggc
cagccaggtgatgctggtaaaccaggagaaaaaggttctcctggtaaattcataaccagt
ccgggagattcaggtcagaaaggagtgaagggttcgtctgggaatcctggatcagaaggg
gtgatgggtcctcctggaaatctgggatcggtcggtctgaagggagaaaagggacaaaaa
ggatttactgtccagggtcctccgggctttccaggagtcaaaggattcaagggcctgtca
ggagatccaggcgtgccaagttatgggagtaaggggcgctcaggaccgtcaggacccccg
ggaagacctggatccaagggcaatgctggctttggttctccgggccagcagggccaatcg
gggcccagaggagaggaaggctctgtaggagcaccggggtctcaagggccccaaggagct
gttggacttccaggatctgtaggacaagatggagcaccaggtcccaaaggttcccggggt
ctagatgggcttcctggaccacctggccccattggaccttgctttctaggagcacctgga
ccagtgggacagcaggggccaatgggagtcattggcttcacaggaagccagggtctaaag
ggtgagaaaggtgatcctgggcttccaggcgtgggagctattggaccacaaggaccattt
ggagtcccggggtttgacggaactccaggtctacagggaagcatgggtttgaaaggacag
actgggaccgctggtcagccaggaagtccaggtatcaggggggactctggtcccccaggt
ccccgtgggaggccaggggacctagggaaaccaggagagcctgggagtcctgggccaaaa
ggtcaggagggtgccagtggtgccacaggctctcaggggccacccgggcttcaggggtac
cgaggggagacaggacccaacgggagacagatcactgtgcagatgtatggagaccctgga
gatcctggagagcctggacctcttggtcagaccggtgctaaaggcaatcaaggtaccccg
gggcctcctggtcttgacggcaccaacggcagaccaggaagagctggacctcaaggacct
cctggagaaccaggtagagatggagagactggtcctcctggttcccgtggtctccctggc
aacccaggggaccttggaaaaccaggttgtaaaggtgaaaaaggttctgcggggccctgt
ggagaacctggttttgatggaaaggaaggactggagggactgaaaggtgcaaaaggggaa
cccagtttacccagacctggacccaaaggatatcatggagaaaagggacagttaggttgc
acaggtcctgcaggtcaaaaggggatgccaggagacagaggagactttggtcctccagga
gatcgtggtccctgtggccctaaaggaaatgctggaccacctggttacagaggtcctcca
ggttctcctggtgagaaagcttgtgatggacctccgggggtcagcggacctccaggacct
agcggccttacaggtaacaaggggggccctggagacccgggttcatctggccccagagga
aaccagggacaagatggcataccaggacctcctggagagaaaggagccatgggagaacct
ggaatcggagccaggggagcagaggggacaaaaggtccaccaggctgcgtcggcgaaaag
ggacctcctggtacttgtggtcatccagggccttctggtcccgaaggaaatcaaggttgt
gctggtccacctgggctcctggacctcctggtcttcgtggaaggcagggaccctgcacag
aaggagacaaaggaggaaaaggaccgccaggagaacgggggccaagaggtctcccggggt
gtcgaggtcccccccggtcccccaggttctggtcttaaaggagagaagggacctaaaggg
ggaataggtaacacaggaaaccctggttgccatggtgaccctggcccacaaggcaggccg
gggctagacggcgcgccaggagcaccaggactcaaaggccttatgggggataccggggtt
actggacctgctgggatgaagggggacaaaggtccagcgggcatcaaaggttcacgtggg
cctgcaggacctacggggaaacaaggaccgaggggtaaggacgtgtcccgggaggtggtg
gtcttagcaggagaccaaggtttgcctggaggtcaggggccaccaggacagccagggacc
ccaggaacgcgagggagaaccggtgctccaggtccaaaaggagtgcgagggggtggcggc
cggacagggggtcctggttttacaggcctgaaaggggacaccggagaccgaggagaccac
ggaataaaaggtgtcgcgggtccacgaggtcccacaggtgccaagggcgcacggggtccc
ccgggtccgtgcgtggacgcccccgagaaggacggattcctgttcagccgacacagccag
aacgttctggtaccggattgcccttctgggtccgtcgaggtgtacagcggcttctccctg
ctcttcatcaacgggaacaaccgagctcacggacaggacttgggagctctcggtagctgc
cttcctcgttttagcaccatgccgttcctcttctgcaatacggacagcacctgccgctac
gccgcacgcaacgactactcctattggctgtccaccgaccaatcagggctgagcaccgtg
cccttcatctctggaccgctcctgaagaattacatcagccggtgtacggtgtgcgagtcg
tcggcgaacgtgatggcggtccacagtcagacgcgtttgcttcccgagtgtccttccggt
tgggattctctgtggtccggcttctccttcgtcatggaaacgggagtcggggcggagggt
tcgggtcagcccctgtcatcgcccggatcctgtctggagaacttccgcaagattccgttc
atcgagtgtcacggcagagggacgtgtaacttctacaccgactcgtactcgtactggtta
gccgctctggacccgcgccacatgttcagcaaaccgaagcctcggaccgaagccggggac
ctgccggaagatttgatcagtcgttgcagagtttgctccaagcgcctgtaa
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