Phycodurus eques (leafy seadragon): 133405579
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Entry
133405579 CDS
T09682
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pee04040
]
133405579 (scn1lab)
Ion channels [BR:
pee04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
133405579 (scn1lab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
Spem1
New_glue
Motif
Other DBs
NCBI-GeneID:
133405579
NCBI-ProteinID:
XP_061538665
LinkDB
All DBs
Position
1:21164907..21232083
Genome browser
AA seq
2017 aa
AA seq
DB search
MAQLLVPPGPDSFRPFVPESLAAIERRIAEEEARRPRAERRSDCDDEDGPKPNSDLEAGK
SLPFIYGDIPPGLVSTPLEDLDSYYSNQKTFIVLNRGKAIFRFNATPALYILNPFNPLRR
IAIRVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRLPIPGNATNSSDTVAADMFL
FNSSLAEVNDTLLNSTGSGFNWIDYISDDRNYYYLPGRRDALLCGNGSGAGLCPEGFICV
KAGLNPDYGYTSFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMVFFVLVIFLGSF
YLVNLILAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLRRQQEEAQVAAAAATDSGEYS
GRGGPTSESSSVTSKLSSKSAKERRNRRKKRKQKEEEEEERGAYNKFHKSLTVDSINRSF
HFSIDPNRLSYEKRCSSPNQSLLSIRESLFSPRRNSQVSLFSFRGRVRDMGSENDFADDE
HSTFEESDSRRGSLFLPHRLERRCSAISQMSLRVPRVTVPANGKMHCTVDCNGVVSLVGG
TSGTNSPVGLLLPEGATTDTEVRKQRSVDYLGEPGGRQRAMSVASILTNTMEELEESRQK
FPPCWYRFANTCLIWDCCPTWLKIKEFVNLVVMDPFVDLTITICIVLNTLFMAMEHYPMT
KEFNDVLSVGNQVFTGIFTAEMCLKVIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVE
GLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFG
KSYKEFVCNINDDCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGPTMCLIVFM
MVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGIAFIKSTVRHF
LQSLFFGGGGKGSNLPEESKPLEELHSNGKGNCITNHTTVEMTKDPGGIYMTAEGNGRPG
GGLVVGGMIEADSTEKYPIDECHYMSFIHNPSLTVTVPIAVGESDFENLNTEDLSSDSSD
VEGSKEKLDTEPKHLSSSEGSTVDIRPPGDGVDSVELEPEESLEPEACFTDGCISRFQCC
EVNEEAPRFKSWWTLRKTCFVIVEHNWFESFIIFMILLSSGALAFEDVYIEQRKTIKTML
EYADKVFTYVFILEMLLKWVAYGFVKYFTNAWCWLDFVIVDVSLVSLVANALGYSELTAI
KSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK
YYYCINTTTDKVFPIEEVNNKSDCLNLVNNSARWKNVKINFDNVGAGYLALLQVATFKGW
MDIMYAAVDSRDLEEQPKYEVNLYMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKFG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANEFQGCVFDCITKQAFDIVIMILICLN
MVTMMVETDDQTLTMDNILYWINVVFIVLFTGECVLKMISLRHYYFTIGWNIFDFVVVIL
SIVGMFLSKMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYAIFGMSNFAYVKRESGIDDMFNFETFGNSMLCLFQITTSAGWDSLLAPIL
NKREPDCDSQMEHPGNNYKGNCGNPSVAIFFFVSYIIICFLIVVNMYIAVILENFSVATE
ESAEPLSEDDFEMFYEVWERFDPDATQFMEYSKLSDFADALDPPLRMPKPNMIQLISMDL
PMVSGERIHCLDILFAFTKRVLGEGGEMDVLRGQMEERFMASNPSKVSYEPITTTLRRKQ
EDMSSIIIQRAFRRYMICMAMKKASALYKEQLKEGLRDPDKDVMVISKFNEISISDKTDM
TPSTASPPSYNSVTKSDKEKYEKENCEKKKDLKDQKK
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgctggtaccgcctggtcctgacagcttccgcccctttgtcccggagtct
ctggccgccattgagaggcgcattgccgaagaggaggcccggagaccacgggcagagcgg
cgcagcgactgcgacgatgaagatgggcccaagcccaacagtgacttggaggcaggaaaa
tcacttcccttcatttatggtgacatccctccaggtttggtgtccactcctctggaggat
ttggacagctattacagcaatcagaagactttcatagtattgaatcgtgggaaggcaatc
ttccgtttcaacgccactcctgccttgtacatcttaaaccccttcaacccgctgaggagg
atagctattagagttttggtacactcgatgttcagcatgttgatcatgttcaccatccta
accaactgtgcttttatgaccctaagtaaccctccggaatgggccaagaatgtagaatac
acattcacaggaatttacacttttgagtccctcataaagatcctggccagaggcttttgc
gtggggaagttcacctttctgcgtgacccttggaactggctggactttagcgtcatcctc
atggcatatgtcacagagtttgtggacctgggcaatgtatcagcactgcgaaccttcagg
gttctgcgagccctgaaaactatatcggtcatcccaggcttgaagacgatagtcggtgca
ttgatccagtcggttaaaaagctgtcagatgtgatgatcctgacggtgttctgcctcagc
gtgtttgctctcattggcctgcagctcttcatgggcaatctgaggcagaaatgcgtgcgc
ttgccaatccctggcaatgccaccaacagcagcgatactgttgccgccgacatgtttctt
ttcaacagcagcctagcagaagtcaacgacacactcttgaacagcacagggagtggcttc
aactggatagactacatcagtgatgatagaaattactattacctccctggtcgcagagat
gctctcctctgtggaaatggcagcggggctgggctttgtccagaaggctttatttgtgtc
aaagcgggccttaatccagactacggatacacaagttttgacactttcagttgggctttc
ctgtctctgttcagacttatgacccaggactactgggaaaacctctatcagcagactttg
cgtgcggcagggaagccctacatggtcttcttcgttttagtgatcttcctgggttccttc
taccttgtcaatctcatattggctgttgtggccatggcttatgatgagcagaaccaggcc
accatagaggaggctcagcagaaagaggaggaattccaggcaatgctggagcagctgagg
aggcagcaggaggaagcacaggttgccgcggcagcagccacagatagcggcgagtacagc
gggaggggggggcccacctctgagtcgtcctccgtgacatccaagctcagctcgaaaagt
gcaaaagagcgacgcaacaggcggaagaaaaggaaacagaaggaggaagaggaggaggaa
aggggggcatacaacaagttccataagtctttgactgtggacagtatcaacagatccttc
cacttctccatcgatcctaaccgactttcttatgagaagagatgctcctcacccaatcag
tctctgctcagtatacgcgagtcactcttctcaccacggaggaacagtcaagtcagcctc
tttagcttccgcggacgagtacgtgacatgggctcagaaaacgacttcgcggacgacgag
cacagcaccttcgaagaaagcgacagccgccgtggctccctgttcttgccacatcgcctc
gagcgtcgttgcagcgccatcagccagatgagtctcagggtacctcgtgtaacagtacct
gccaatggcaagatgcattgcacggtggactgcaacggcgttgtttcgctggttggagga
acatctggaactaactctcctgttggtctcctgctgcctgagggtgccacgacagacacc
gaggtgagaaaacaacgctcagttgattatttaggcgaaccaggaggcaggcaaagagcc
atgagtgtggccagcatcctcaccaacaccatggaagagcttgaagagtcgaggcagaaa
ttccccccctgctggtatcgatttgccaacacttgtttgatctgggattgttgccctacc
tggcttaaaattaaggagtttgttaacctggtggtcatggacccatttgtggatctgact
atcacaatttgcatcgtcctcaacaccctttttatggctatggagcattacccgatgacg
aaagaatttaacgatgtcctttctgttggaaaccaggtatttactggcattttcacagca
gagatgtgcctcaaggtcatcgccctcgacccttactattacttccaggagggctggaac
atttttgacggcattattgtgagtctgagtctgatggagctgggattggccaatgtagag
ggcctgtctgtgctcaggtccttccgactgctgagggtattcaaactggctaaatcctgg
ccaactctgaacatgctgatcaagatcattggtaactcagtgggggcgctgggtaacttg
accctggtgctcgctatcatcgtcttcatctttgccgtggtgggcatgcagcttttcggc
aagagctacaaggagtttgtctgtaacataaatgatgattgtcagctaccacgctggcac
atgcatgatttcttccactccttcctcatcgtgttccgagtgctgtgtggagagtggata
gagactatgtgggactgtatggaggtagcaggaccgactatgtgtctgattgtcttcatg
atggttatggtcatcggaaacttggtggttctgaacctgttcttggctctgcttctgagc
tcattcagcgctgacaacttggctgcaactgatgacgacagcgagatgaataacttgcaa
attgctgtgggccggatccagcgcggcattgcctttataaaatctactgttcgacacttc
ctccagagcctgttctttggtggtggcgggaagggctccaacctgcctgaagagagcaaa
cccctagaagaactacatagcaatggcaaaggcaactgcatcaccaatcacacaacagtg
gaaatgaccaaagaccctggcgggatatacatgacagctgagggcaacgggcgtcctgga
ggaggcctggtcgttgggggcatgattgaggcggatagcaccgaaaagtaccccatagac
gaatgtcactacatgtcctttattcacaatccgagcctgacagtcacagtgcctattgct
gtgggtgagtcagactttgagaaccttaacacagaagacttaagcagcgattcctcagat
gtggagggcagcaaagagaagctcgacacagagcctaaacatctcagctcttcagaaggg
agcactgttgatattcgcccaccaggagatggggttgattcagtggaactggagccagag
gagtcactggagccagaggcctgctttactgacggatgcataagcagattccagtgttgc
gaggtcaatgaggaagcacccaggtttaagagttggtggacactcaggaaaacctgtttt
gtaatagtggagcacaactggtttgaatcctttatcatatttatgatcctgctcagcagt
ggcgcactggcttttgaggacgtttatattgaacagaggaagaccatcaaaacaatgctg
gagtatgcagacaaggtctttacttatgtcttcattctggagatgctgttgaagtgggtg
gcctatggctttgtcaagtacttcaccaacgcctggtgctggctcgacttcgtcattgtt
gatgtgtcccttgtcagcctcgtggccaatgctctgggctactccgagctcactgcgatc
aaatccctgaggacactgcgagccctccggccactgagagccctgtctcggttcgagggc
atgagggttgtggtgaacgcactactgggggccattccctccatcatgaatgtgctgctg
gtctgcctcatcttttggctcatcttcagcatcatgggggtcaacctgttcgcagggaag
tattactactgcatcaacactaccactgacaaggtcttccccatcgaggaggtcaacaac
aagtctgactgcctgaatttggtcaacaacagcgcccgatggaagaacgtcaaaatcaat
tttgacaacgttggtgctggctatttggcgttgttgcaagtggcaacatttaagggctgg
atggacattatgtatgcagctgtggattctcgtgatctggaggaacagcccaaatatgaa
gtgaacttgtacatgtatttgtactttgtcgtcttcatcatctttggttccttttttacc
ctcaacctcttcattggagttatcattgacaacttcaaccagcagaagaaaaagtttgga
gggcaagatatcttcatgacagaggaacagaagaaatattacaatgctatgaagaagtta
ggctccaagaaaccacaaaaaccaattcctcgaccagcaaatgaatttcaaggctgtgtg
ttcgactgcataacaaagcaggcttttgacattgttataatgatcctcatctgccttaac
atggtgaccatgatggtggagactgatgaccagactctgacgatggacaatatcctctac
tggatcaacgtggtcttcattgtgctcttcacaggggagtgtgtactaaagatgatctcc
ttgcgtcactattacttcaccataggttggaatatatttgattttgtggtggtgatcctg
tcaatcgtaggtatgtttttgtcaaaaatgattgagaagtactttgtttccccgacatta
ttccgagtgatccgtctggccaggatcggccgcattctccgccttatcaaaggtgccaaa
ggcattcggactctcctcttcgccctgatgatgtcccttcctgccctatttaatattggt
cttctcctcttcttggtcatgttcatctacgcaattttcggcatgtccaactttgcctac
gtcaaacgggagtctggaatcgacgacatgttcaattttgagacctttgggaacagtatg
ctctgcttgttccagatcactacctcagctgggtgggatagtctgttggcacccatcctg
aacaagagggaacctgactgtgatagccagatggagcacccaggcaacaactacaaaggc
aactgtggcaacccatcagtcgctatcttctttttcgtcagctacatcatcatttgcttc
cttattgtggtcaacatgtacattgccgtcatcctggagaacttcagtgtcgcaacggaa
gagagcgccgagccactgagcgaggatgactttgagatgttttacgaagtgtgggagcgt
tttgaccccgacgccacgcagttcatggagtacagcaaactctctgactttgccgacgcc
ctcgacccaccgttgcgtatgcccaaaccgaacatgattcagctcatctctatggacttg
ccgatggtcagtggcgagcgcatccactgccttgacatcctgtttgccttcactaagcga
gtactcggggaaggtggtgagatggatgtgttgcgcgggcagatggaggagcgctttatg
gcatcgaacccctcaaaggtgtcgtacgagccaatcaccaccactctccgccgcaagcag
gaagacatgtcctccatcatcatccagagagcctttcgccgctacatgatttgcatggcc
atgaagaaggcctcggccctctacaaagaacaactgaaagagggcttacgtgaccctgac
aaggatgtgatggtcatcagcaagttcaatgagatctccatctcggacaaaacagacatg
accccatctacagcttcccctccctcttacaacagcgtgacaaaatctgacaaagaaaaa
tacgagaaagaaaattgtgagaagaaaaaagacttgaaagaccagaagaaatag
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integrated database retrieval system
