Phycodurus eques (leafy seadragon): 133405603
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Entry
133405603 CDS
T09682
Symbol
col4a4
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04510
Focal adhesion
pee04512
ECM-receptor interaction
pee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133405603 (col4a4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133405603 (col4a4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133405603 (col4a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pee04147
]
133405603 (col4a4)
00536 Glycosaminoglycan binding proteins [BR:
pee00536
]
133405603 (col4a4)
Exosome [BR:
pee04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133405603 (col4a4)
Glycosaminoglycan binding proteins [BR:
pee00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133405603 (col4a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133405603
NCBI-ProteinID:
XP_061538711
LinkDB
All DBs
Position
7:31483599..31513094
Genome browser
AA seq
1650 aa
AA seq
DB search
MRLRCFLMLLTSTAVLGGDDAVLCGGRDCSSCQCFPAKGARGFPGSLGRQGPVGPPGFPG
PRGPPGEKGKRGAEGPAGSPGPKGDMGAVGVPGFPGLEGVPGHTGPGGGPGFPGVDGCNG
TRGKQGDPGLPGEQGPSGDVGLQGPKGFPGEPAFLFLQYPGVPGDAGFRGLPGLPGGQGP
GGSTGLMGPVGPDGVNGLPGLAGFRGLPGERGRSVPGPKGDEGEQGVQGPPGPFEIVDPP
EEFFVKGEQGPAGPKGVCGDQGLPGLDALPGIKGEKGIVGPPGPRGLLGRRGRPSSKGAK
GTVGSSGLPGLIGQEGPKGMMGDLGLKGLPQEIVITHSGDAGDPGSPGLMGPPGDRGLMG
MHGPQGAPGRAIPGPAGVVGASGTSGSRGEKGDPGQVFTDQAFSGEAGRPGSPGPRGAKG
QPGRPGYYCLPGLPGESGEPGEQGPSGAPGYYGFKGRQGECSCGPLIVMRGAPGPAGEPG
LFGYQGSPGAQGPRGEKGLAGDTGAKGQAGLDGLPGVKGFKGQKGDFVVVDIKGEKGKSA
EPGFAGRQGFPGRRGQNGLPGLPGSPGPQGENYPGSSGNQGLPGLPGPKGLTGLTGPQGL
GVVGAIGRRGDPGAPGPVGFPGLPGLKGVQGETLTCVPRNPGAPGQKGEAGDRGLRGLPG
PPGFSGFTGPDGPNGEKGQSGLPGPRGVAGPPGFIGDTGDEGLEGFSFAGGPGSPGAPGT
TGLRGPAGESYVGTSGPIGFPGLAGSQGPKGVPGQAGKQGFQGVPGLPGSPGAQGQRGQD
GAMGTIGPPGPIYDFCERGKPGPTGSRGPQGAIGPPGCFGQKGEAGETRSPRYGPRGPAG
KPGSSGFLGYPGLPGPPGPSGDSGFSGWDGSKGLRGPLGKNGVQGVQGSIGFPGYPGRTG
ERGSNGQDGRPGFQGPKGDRGCKGNPGPPGETLGVPIQGARGKPALPGVNGFPGVRGNKG
AQGLVGKPGYPGTDMAPGISGPPGPPGSSYKPGFSGGLGPPGPSGFLGFPGETGDPGDQG
SPGSSGERGRQGRPGSKGDQGESRSRPGLPGDKGLPGYSGPPGPPGPQGDPGALGFTGEP
GQRGSKGDPGQPGEQGSSGVIGPPGPTGRPGVPGLPGNTGADGPPGAQGLSGLQGPPGPL
GLHGLDGLKGVKGDTGSRGLSVIGSQGSQGLPGEKGPPGPRGPPGSSQPGPPGPRGPPGS
RGPQGRVGPSGESGPDCKSPPLGILGDPGDPGLDGEPGYPGDMGESGPNPPVAGDDGDNG
DNGCLGPKGDKGLPGPTGQPGIGGFPGFKGEQGSPGLMGIPGNTGPIGFPGPTGPLGSQG
STGLAGPKGEMGRVFPCPTYPSPPPGPPGPPGLPGVPGSAGFQGENGFQGLKGKKGDAGC
LGPQGPRGPSGPDGEPGRRGLEGENGVVGAKGDPGLIGDRGPPGPSRPLNAGFLMVMHSQ
SKALPSCPQGMRILWVGYSLLYLEGQEKAHTQDLGQAGSCMRVFSTMPFASCNMGTCSYA
GRNDKSYWLSTTAAVPALPVGGASVEEHISRCAVCEAPSAPVALHSQSCVQPRCPPNWTS
LWTGYSFLMHTGAGDEGGGQSLTSSGSCLLNFRAQPFVECQGPRGTCHYFANIYSFWLTT
PASGAVTTEADAQHGSNVGRCTVCIKVGRP
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaggtgcttcctgatgctcctgaccagcaccgctgttcttgggggcgacgac
gcggtcctgtgcggtgggcgagactgttcctcctgtcaatgctttccagcgaagggggcg
agggggttcccagggtctcttgggcgtcagggtcctgtggggccccccggcttcccaggc
ccacggggtcctccaggagagaaaggcaagcgaggggctgaaggcccagcaggatctccg
ggaccaaagggagacatgggagctgttggtgttcccggatttcctggtttagagggagtc
ccgggtcacacaggcccaggcggtggtcctggttttccaggtgtggacggctgtaacggg
accagaggaaagcagggagatccaggactacctggagaacaagggcccagcggtgatgtg
ggtcttcaaggaccaaagggatttccaggagagccagcattcctttttctccagtaccct
ggagtccccggtgacgccggcttcaggggacttcctggtctgccgggtggacagggtcca
ggaggttcgacaggattaatgggtcccgtcggtcccgacggagtaaatggtctccctggt
ttggcaggtttcagaggtctacctggtgaacgaggtcgatcggtgccgggaccgaaagga
gacgagggggaacaaggcgtccaggggcccccggggccatttgagattgtcgatcccccg
gaggaatttttcgtcaaaggagagcagggtccagctgggccaaaaggggtgtgtggagat
caaggcctgccaggtctggatgctcttcctggcatcaagggagagaaggggattgtggga
cctcctggacccaggggactcctaggacgccgtggtcgacccagttccaaaggagcaaag
ggcactgtaggaagttctggtcttccaggtctgatcggacaagaaggtccaaagggcatg
atgggagatcttggtctaaaaggcctgcctcaggaaatcgtcatcacacattcgggtgac
gctggagatccaggaagtccgggattgatgggacctccaggagatcgtggactcatggga
atgcacgggccccaaggagcccctggtagagctataccaggaccagcaggagtggtggga
gcgagtgggacttcgggaagcagaggtgagaaaggtgatccgggtcaagtttttacagat
caagcattctctggagaagcaggaagacctggaagtccgggacccagaggagcaaaagga
caaccgggaaggccaggctattactgccttcctggactaccaggagaatctggagaacct
ggtgaacaagggccctcaggggccccaggttactacggattcaaaggtcgccaaggtgaa
tgctcctgcggtcctctgattgtgatgaggggagccccaggcccagcgggggagcccggg
ttgtttggctatcaagggtcccctggagctcagggcccaagaggggagaaaggcttagcg
ggagacactggagctaaaggacaagcgggcctggatgggttacctggtgtcaaagggttc
aaaggtcaaaaaggagacttcgttgtggtagacattaaaggtgagaagggcaaaagcgct
gagccaggttttgcgggtagacagggtttccctgggagaagaggacagaatggactccca
ggactccccggaagtcctggacctcagggagaaaattaccccgggtcttcagggaaccaa
ggccttccaggtctccctggtcccaaaggactaacgggacttactggcccccagggatta
ggtgtggttggagcaataggaaggcggggagacccaggggccccgggacctgtgggtttc
cctggcctccctggcttgaaaggtgttcaaggcgaaacgcttacttgtgtacccagaaac
cctggcgctccaggacagaaaggggaggctggagatagaggcctcagaggacttcccggt
cctcctggtttcagtggattcacaggacctgatggacctaacggagaaaaaggacagtct
ggacttcctggaccacgtggagtagcaggaccgccaggttttattggagatactggagat
gaaggacttgaaggattcagttttgctggaggaccaggctctccaggtgcaccaggcact
actggacttagaggaccagctggagagtcttatgtggggacctcaggacccattggcttt
ccaggactagcaggctctcagggacctaaaggagtcccaggccaagctggcaagcagggt
ttccaaggagttccaggtctgcccgggagtccaggggcacagggtcagagaggacaggat
ggcgctatgggaactattggtcccccgggcccgatctatgatttttgcgaaagaggaaaa
cctggtcccacaggctcccgcggtcctcagggagcaattggccccccgggatgttttggg
cagaaaggtgaagcgggagaaacaagatctccacgttatggcccccgtggccctgcaggt
aaaccagggtcttctggttttcttggttatcccggacttccgggcccacctggtcccagt
ggagactctggattttcagggtgggacggctcgaaaggtctgaggggaccccttggtaag
aatggtgtccaaggggtacaaggatcaattgggttcccaggatatccagggaggacagga
gagagaggatctaatgggcaagacggcaggccaggatttcaaggtcccaaaggagataga
gggtgtaaagggaacccaggacctcctggggagacactgggtgtccccatccaaggtgcg
agaggaaaaccggccctccctggtgtcaacgggttccccggtgtacgagggaacaagggt
gcacaaggtcttgtgggcaagcctgggtatccaggcaccgatatggccccgggcatcagc
ggacccccgggtccgcctgggtcttcgtacaaaccaggtttttctggaggacttgggcct
cctggaccttcaggtttcctcggcttccctggagaaacaggagacccaggtgaccaaggt
tcccctgggagctctggtgaacgcggtcgtcaaggacgtcctgggtccaaaggtgatcaa
ggagagtctcgcagtagacctggtttacctggggacaaggggcttcccggatactctgga
cctccaggtcctcctggacctcaaggagatcctggagcactgggtttcactggagagcca
ggccagagaggctccaaaggagatccgggacagcccggggagcagggatcatcaggtgtg
attgggcccccagggcccacaggtcgcccaggggttcctgggcttcctggtaatacgggt
gctgacggtccccctggagcgcagggtctctcaggactacaaggtcctcctggaccactg
ggacttcatggcctggatggactgaagggagtgaaaggagacactggcagcagaggtctc
agtgttataggttctcaaggctctcaaggcctcccaggagaaaaaggcccacctggtcct
cgaggtcctccaggttcatcacagccaggacctccaggacccagaggccctccaggatcc
agggggccacaaggacgagttggtccttcaggtgaatctggacctgactgtaaaagtcct
cccttagggattttgggagatcctggtgaccctggactagacggagagccaggttacccc
ggtgacatgggggagtctggtcctaaccctccagtagctggcgatgatggggacaatggg
gacaatggatgcctaggcccaaagggagacaaaggacttccaggccccacaggacaacca
ggcataggtggatttccagggttcaaaggtgagcaagggtctcctggcctgatggggata
cctggaaacacaggccctataggttttccaggaccaactggaccacttgggtctcaagga
agtacaggtctggcaggtccaaagggggagatgggcagagtttttccttgccccacttac
ccttcacccccaccgggccctccaggaccccctgggctacctggtgtaccaggaagtgct
ggttttcagggagagaatggtttccagggactcaaaggtaagaagggggatgccgggtgt
ctgggaccacaaggccctcgggggccatcgggtcctgacggggagccgggtcgacgaggc
ctggagggggagaacggtgtggtgggagccaagggtgatcctggtttgattggggaccgt
ggacctcctggaccgtccagacccttgaacgcgggcttcctgatggtcatgcacagccag
tccaaagcgcttccatcgtgtccacaggggatgcgaattctgtgggtgggatacagtctg
ttgtacctggaaggccaggagaaggcgcacactcaggaccttggccaggcgggctcgtgc
atgcgcgtcttctccaccatgccgttcgcttcgtgcaacatgggcacgtgctcctacgcc
ggccgcaacgacaaatcttattggctgtccaccacggccgccgtgcccgccctgccggtg
ggcggagcctccgtggaagagcacatcagccgctgcgcggtgtgcgaggcgccctcggcc
cccgtggctctgcacagccagtcgtgcgtccagccccggtgcccgcccaactggaccagc
ctgtggaccggctactccttcctcatgcatacgggcgcgggcgacgagggcggcggtcaa
tctctgacgtcgtcgggaagttgcctgctgaacttccgggcgcagccttttgtggagtgc
caaggccctcgcgggacgtgccactactttgccaacatctacagcttctggctgaccacg
ccggcgtcgggcgccgtcaccacggaagccgacgcgcagcacgggagcaacgtcggacgc
tgcaccgtctgcatcaaagtcggccggccgtga
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