Phycodurus eques (leafy seadragon): 133405927
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Entry
133405927 CDS
T09682
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133405927 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133405927 (polr1b)
Enzymes [BR:
pee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133405927 (polr1b)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
133405927 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
133405927
NCBI-ProteinID:
XP_061538997
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All DBs
Position
8:29819611..29835425
Genome browser
AA seq
1134 aa
AA seq
DB search
MDASDGWADVAKSPTLKNLTDGRFGELKASQCQAVQDLVKTHIDSFDQAVGEGLSRVVQA
IPPLEFSAKGERISLAFVEAAVYPPAVSKGNVCREMRVFPAECRARRCTYRGKMVADVSW
AVDGVPKGIIKQSLGQLPVMVKSRLCNLRGMTPRELVRHREEAEEMGGYFIVNGMEKVIR
MLVMPRRNYPIAMSRPKWKSRGQGYTQYGVSIRCVKEDHTAVNMNLHYLDNGTVMLNFIY
KKELFFLPLGFALKAMVDLSDFEMFSELIKGAEENSLFRSCACEMLRLVSEHGCTSRAQV
LDYLGRRFRVKMHLPEWYTDRECADFLLDECVCIHLRTGLEKFRLLCLMTRKLFSFAKQE
SLEENPDGVGCQEVLTPGQLYLMFLKERMSAWLVSIKLVFEKRASRLRGGWTSVNIMKMF
NLGNDLTKYFEYLLATGNLSSKSGLGMLQSTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCQVVTRWLPTVTLPALLCSLGVA
PADAAPARPYADCYPVLLDGAVVGWVEAQVAPGLVDSLRRFKVLQEKKVPPWTEIVLVPK
TGKASLYPGVFLFTTPCRLVRPVRNLALGALELLGTLEQMYAEVAVTEAEVRPGVSTHRE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHAFLERSDNKLYRLQTPQTA
LVRPAMYDRYRLDDYPSGTNAVVAVISYTGYDMEDAMIVNKSSWERGFAHGCIYKTEMVD
LALRARGQDGVVFGAKPGDPKVNGRLDPDGLPPVGAVLRYGDPYYSYQNLNTGQAFVTFY
KSHEACVVDNVKICGNDGGTGSFKRVCITVRVPRNPTVGDKFASRHGQKGILSRLWPAED
MPFSESGVSPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFAFSEDNSALDY
FGEMLRAGGYNYYGTERLYSGTSGLELEADIFVGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCLDCGSLLSPLL
ERPPPTWSSTRHRRTVCALCGKSDSVDSLSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctcggacggatgggccgatgtggccaaaagtcccactttgaagaacctgacg
gacggacgcttcggcgagctcaaggccagccagtgtcaagccgtgcaggatttggtcaaa
actcacattgactctttcgaccaggccgtcggcgaaggattaagccgcgtcgtgcaggcc
atcccgccgctggagttctcggcgaagggcgagcgcatcagcctggcgttcgtggaggcc
gccgtgtacccgcccgcggtctccaagggcaacgtgtgccgcgagatgagggtcttcccg
gccgagtgtcgcgccaggcgctgcacgtacaggggcaagatggtggcggacgtgagctgg
gcggtggacggcgtccccaaagggatcatcaagcagtcgctcggacaacttcccgtcatg
gtcaagtcccggctgtgcaacctgcgcgggatgacgccgcgggagctcgtgcggcaccgc
gaggaggccgaggaaatgggcggctacttcatcgtgaacggcatggagaaggtgatccgc
atgctggtcatgccgcggaggaactaccccatcgccatgtctcgacccaaatggaagagc
agaggccagggctacacgcagtatggtgtgtccattcgctgcgtgaaggaggatcacacg
gcggtgaacatgaaccttcactacctggacaacggaaccgtcatgctcaacttcatctac
aagaaggaacttttctttcttccgcttggcttcgcgcttaaggctatggtggatctgagc
gacttcgagatgttctctgagctgatcaaaggcgcggaggagaactcgctgttccgcagc
tgcgcgtgcgagatgctgcgcttggtgtccgagcacggctgcacgtcgcgcgcccaagtc
ctggactacctgggccggcgcttccgcgttaagatgcacctgcccgagtggtacaccgac
cgggagtgcgccgacttcctgctggacgagtgcgtctgcatccacctgaggacgggcctg
gagaagttccgactgctgtgcctgatgacccgcaagctgttcagcttcgccaagcaggag
agcctggaggagaacccggacggcgtgggctgccaggaggtcctcacgccgggtcagctc
tacctcatgtttctcaaggagaggatgtcggcgtggctcgtgtccatcaagttggtgttc
gaaaagcgagcaagtcgcctaaggggcggctggacgtcggtaaacatcatgaagatgttc
aacctgggcaacgacctcaccaaatacttcgaatacctgctggccaccgggaacctcagc
tccaaatccggtctgggcatgctgcagagcacgggtctgtgcgtggtggccgacaagctc
aacttcatccgctacctgtcgcacttccgctgcgtgcaccgcggcgccgccttcgccaag
atgcgcaccacgtctgtgcgcaagctgctgcccgagtcgtggggcttcctgtgcccggtg
cacacgcccgacggcgaaccctgcggcctcatgaaccacatgacggccagctgccaggtg
gtcacgcgctggctgcccaccgtgacgctgcccgccctgctctgctcgctgggcgtcgcc
cccgccgacgccgcgcccgcccggccctacgccgactgctaccccgtcctcctggatggc
gccgtggtgggctgggtggaggcccaggtggcacccgggctggtggactcgctgcggagg
ttcaaggttctgcaggagaagaaggtccctccttggaccgagatcgtcctggtgcccaag
acgggcaaagccagtttgtacccaggcgttttcctgttcaccacgccgtgccgcttggtg
cgccccgtgcgcaacctggcgctgggcgcgctggagctattgggaactttggagcaaatg
tacgccgaggtggccgtgacagaggccgaggtgcggccgggcgtcagcacccaccgggag
cttttcccgcacagtatgctcagcgtggtggccaatttcataccctactcggaccacaat
cagagccccaggaacatgtaccagtgccagatgggtaagcagacgatgggcttccctctc
cacgccttcctggagcgctcggacaacaaactctaccggctgcagaccccccagaccgcc
ctggtgcggccggccatgtacgaccgctaccggctggacgactacccgagcggcaccaac
gccgtggtggccgtcatctcctacaccggctacgacatggaggacgccatgatcgtgaac
aagtcgtcgtgggagcgcggcttcgctcacggctgcatctacaagacggaaatggtggac
ctggccctcagggcgcggggccaggacggcgtggtgttcggggccaagccgggtgacccc
aaggtcaacgggcgactggaccccgacggacttcctccggtgggcgccgtgctgcgctac
ggcgacccgtactacagctaccagaacctgaacaccggccaggccttcgtcaccttctac
aagagccacgaggcgtgcgtggtggacaacgtcaagatctgcggcaacgacggcggcacg
ggctccttcaagcgcgtctgcatcactgtgcgagtgccgcgcaaccccaccgtcggcgac
aagttcgccagccgccacggccagaagggcatcctgagccgcctgtggcccgccgaggac
atgccgttcagcgagagcggcgtcagtcccgacatcctgttcaacccgcacggcttcccg
tcgcgcatgaccatcggcatgctcatcgagagcatggcgggcaagtcgggcgccctgcac
ggcctgagccacgacgccacgcccttcgccttctccgaggacaactcggcgctggactac
ttcggcgagatgctgcgggccggcggctacaactattacggcaccgagcgcctctacagc
ggcaccagcggcctggagctggaggccgacatcttcgtcggcgtggtttactaccagcgg
ctgaggcacatggtgtccgacaagttccaggtgcggacgacgggcgcacgcgacaaggtg
accaaccagccggtgggcggccgcaacatccaaggcggcattcgcttcggcgagatggag
cgcgacgccctcctggcgcacggctcgtccttcctgctacacgaccgcctcttcaactgc
tccgaccgctcggtggcgcaggtttgcctcgactgcggcagtttgctgtcgccgctgctg
gagcggccgccgcccacctggtcgtccacgcgccaccgccgcaccgtctgcgcgctctgc
ggcaagagcgactcggtggactcgttgtccgtgccgtacgtcttccgctacttcgtggcc
gagctcgccgccatgaacatcaaagtcaagttggatgtcaagtga
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