Phycodurus eques (leafy seadragon): 133406208
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Entry
133406208 CDS
T09682
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pee03000
]
133406208 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pee03310
]
133406208 (rorca)
Transcription factors [BR:
pee03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133406208 (rorca)
Nuclear receptors [BR:
pee03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
133406208 (rorca)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
133406208
NCBI-ProteinID:
XP_061539620
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Position
8:complement(27873575..27892856)
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AA seq
474 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECANTAAREKNGDMAD
HGRTYRRVSSTALSDLDDFTTLPDGLLFDLPLTPEDGGGEYGNLDMLAGSTGSSSSSQSS
PEQTNLDFAEGNHSIKHEYQLLHDSGLFSHAILNPLPEGCSLLELEHVTQCVVKSHIETS
QYTTEELKRMAWSTYSMEETRMYQTKSAEVMWQQCAIHITNAIQYVVEFAKRISGFMDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTFLFDGRFAPAHFFKALGCDDLVTAVFDLAK
SLSRIQMSEEEMALFTAAVLLSPDRPWLTDVQQIQKLQEKVYVALQRCLQKGGASEEKLA
KMVSKLPIMKSICKLHIDKLEFFRLVHPETAYTFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtgataccctgcaaaatctgcggggacaaatcgtcagggatc
cactacggtgtcatcacctgtgaaggctgcaagggtttcttccgacgcagccagcagaac
aatgccatgtactcctgctcccgacagagaaactgcctgattgatcggaccaatcgcaac
cgctgccagcactgccggctgcaaaagtgtctcgctctgggcatgagccgtgacgcagtg
aagtttggccgcatgtccaagaagcagcgcgacagcctgtatgcggaggtccagaagcac
caacagtcccaggaatgcgccaacacggcagcccgggaaaagaacggcgacatggccgac
cacggccgcacctacagaagagtgtccagcaccgcgctcagcgatctggacgactttacc
acgctgcccgacggcctgctcttcgacctgccgctgacccccgaggacgggggcggcgag
tacggaaacctggacatgcttgccggcagcacgggcagcagctcgtcctctcaaagttcg
ccggaacagaccaacttggactttgcggagggcaaccacagcatcaagcacgaataccag
ttgttgcacgactctgggctcttctcgcacgccatcctcaacccgctgcccgaagggtgc
tccctgcttgagctagagcacgtcactcaatgtgtggtgaagtcccatatcgaaacaagc
cagtacactacagaggagctgaagagaatggcgtggtccacatacagcatggaagagacc
cgaatgtatcagactaagtcagctgaggtgatgtggcaacaatgtgccatccacatcacc
aacgccatccagtacgtggtggagtttgctaagcgcatctctggcttcatggacctgtgt
cagaatgaccagattatcctcctcaaagcaggctgcatggacgtccttctgatccgaatg
tgtcgagcctataatcccatcaataacacgttcctctttgatggaaggttcgcccccgct
cacttctttaaagcacttggctgtgatgacctcgtgacggccgtgttcgacttggccaaa
agcctgagtcgtatccagatgtctgaggaggagatggccctcttcactgccgctgtgctg
ctttcaccagaccgaccctggctgacagatgtgcaacagattcagaaacttcaggagaag
gtctatgtagctctccagcgctgcttacaaaaaggcggcgcatcagaagaaaaacttgcc
aagatggtgtccaaactccccatcatgaagtccatttgcaagctccacatcgacaaactg
gagtttttccgtctggtccaccccgagacggcgtacactttccccccgctgtaccgcgag
gtgtttggcagtgaaatcactttcccagactccacagagggctaa
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