Phycodurus eques (leafy seadragon): 133406560
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Entry
133406560 CDS
T09682
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133406560 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133406560 (taf4b)
03036 Chromosome and associated proteins [BR:
pee03036
]
133406560 (taf4b)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133406560 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
133406560 (taf4b)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
133406560 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
133406560
NCBI-ProteinID:
XP_061540219
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All DBs
Position
8:29998512..30015300
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AA seq
639 aa
AA seq
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MATNKAPAGTGRAGEASGIPGRSFQVPVPSPGVCQGHGHQPASSVQAPPTSSSAIVVVTA
KVAKPVLNASQAPVTPASASASAQRRTVVITVPRPAGPPLPVAPRPANIQIPAGMMLIRS
DSGQLMLMSQQALAQAQAQQGARSGNSPASGIPASQATSASQGNEKVTMIRMTASATFQP
AAVQNAAMVKPRFRPAPWQPNTGPPFQPVAVETKKEPPPAFSQETLESVKKCKNFLVTLM
KLASSDSKSANMANNVRGLVGSLLEGKMEAEEFTQALYRELKSTPQPCLVPFLKKSLPAV
RCLTADPQAFIQQACCSSSSCTPAVKKPNVDPAPSPKALHQVSSGASASPQSRTSACKSF
RTISPPEVTPVQMGKAFSGGFSVRQPFARDPPCATRLAFRDTSGSYKEDDDINDVASMAG
VNLREENAQILTGAVGSVVRSCQDQLFLSAGPALGRFLRAGRPLGVTEVGPEVVALVSHA
TQECLRGLLEKLTVMAEHRKAALKEDSWHDKVSDVRSQLRFLEEVDALKKRRKDEEERDR
LMRLARSRSHPDDPLQQQLKQRAKELQQMEEAQLQQREANLTALAAIGPRKKRALARTEG
NVSLAPRQRVSRVTLRDLLLCMEHSQFLRRSLTFYKAML
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaataaagcccccgcggggacgggacgagcgggagaggccagcggcattcca
gggaggagcttccaggtccccgtgccttctccaggtgtttgccagggccacggccaccaa
cccgcctcctcggttcaggcccccccgacgtcgtcctccgccatcgtggtggtaacggcc
aaggtcgccaaaccggttctgaatgcgagccaggcccccgtgaccccggcctcggcctcg
gcctcggcccagaggaggacggtggtgattacggtgcctaggccggccggaccacctttg
cccgtggcgcctcggcccgccaacatccagatcccagcaggtatgatgctgatccgcagt
gacagcggtcagctgatgctgatgtcccagcaggctttggcacaggctcaggcacagcag
ggagcgagatccggcaacagcccggcgagcggaattccggcctcacaggcgacatccgca
agtcaaggcaacgagaaggtgacgatgatcaggatgacggcttctgcgactttccagccg
gcggcggtccagaacgcggccatggtcaagccgcggttccgacccgcaccgtggcagccg
aacacagggcctccttttcagccggtcgccgtggaaaccaagaaagagcccccgcctgcg
tttagtcaggagacgctggagagcgtgaagaagtgcaagaacttcctggtgacgctgatg
aagctagcgtccagcgactcaaagtctgccaacatggccaacaacgtgcggggcctggtc
gggagtctgctggaaggcaagatggaggcggaggagttcacgcaggcgctctatcgggag
ctcaagtccacaccgcagccctgcttagtgcccttcctcaagaaaagtctcccggcagtg
cgttgcctcaccgcagacccgcaggcattcatccagcaggcctgctgctcctcctcctcc
tgcacccctgccgtgaagaagcccaatgtggacccagctccaagtccgaaagccctccat
caggtgtcaagcggagcgagcgcgtcgccccagtccagaacttcggcctgcaagagcttc
cgaaccatttctccccccgaagtcaccccggtccagatgggaaaagccttctcgggaggg
ttctccgtgaggcaaccttttgctcgagatcctccgtgcgccaccagacttgctttcagg
gacacttcgggctcgtacaaagaagacgacgacattaacgacgtggcgtccatggcgggc
gtcaacctgcgcgaggagaacgctcagatcctgaccggcgcggtgggctcggtggtgcgg
tcgtgccaggatcagctcttcctgtccgccggccccgcgctgggccgcttcctgcgcgcg
ggacgcccgctgggggtgacggaagtgggccccgaggtggtggctctggtctctcacgcc
actcaggagtgtctccgcggcctcctggagaagctcaccgtgatggcggaacaccggaag
gcggccctgaaggaggactcgtggcacgacaaagtgagcgacgtgcgctcacagctgcgt
ttcctggaggaggtggacgctttgaagaagaggaggaaggacgaagaggagagggacagg
ctgatgcgtttggccaggagtcgctcccaccctgacgatccgctgcagcagcagctgaag
cagagagcaaaagagttacaacaaatggaagaagctcagctgcagcagcgagaagccaac
ctcaccgctctggcggccatcggcccgaggaagaagagggcgctcgcccgcacggaaggc
aacgtgtcgctggcgcccaggcagcgcgtgagtcgcgtgacgctgcgagatctgctgctg
tgcatggagcacagccaattcctgcgacgctcactcacgttctacaaggccatgctctga
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