Phycodurus eques (leafy seadragon): 133406730
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Entry
133406730 CDS
T09682
Symbol
frem1b
Name
(RefSeq) FRAS1-related extracellular matrix protein 1b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133406730 (frem1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pee04091
]
133406730 (frem1b)
Lectins [BR:
pee04091
]
C-Type lectins
Lecticans
133406730 (frem1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Calx-beta
Big_9
bMG5
Motif
Other DBs
NCBI-GeneID:
133406730
NCBI-ProteinID:
XP_061540565
LinkDB
All DBs
Position
8:complement(30635619..30676472)
Genome browser
AA seq
2199 aa
AA seq
DB search
MCREGGRWGPSRGRRTRPPDSRSLFGGPAAPGGSPACAWTLDWAPETRDSRNPSAKLLAR
RGGSKMAALRALLLLLAGASSSPGNGALVEVNAGMEVVRGRRAFLGREQLRIGTEADAHC
KVEVVLNEPITQRVGRLTPQMFDCDFLPEEVMYQHNGSPLLNSDQVLLRVYRFRSSETSV
ESVLLQIRVVDRSSGLADLGTTPLTVRDFYALSNAIDDSVVIIRSPGRAACTVRLLAAAG
ALTAGRLVRGGGALQRTGREAPAAPCPGNKACASGAEEVGFLKTSCRDFVSSGLKYRHLS
PPSPDLDYVAITVELRERDTRAALETESLWLPVRIVGATPNQPPRAAFAASFVLEVDQFV
LTPITTASLDAEDPETPKDGLVFNVSALPPRGYVTHLDRHTEPVRSFAWSDLHRLKVAYQ
PPNSSHLTRDNFQMEFQAIDASYAAGPPVVLHVSIKAAETNAPRVSWNTGLDLLEGQSRA
ITWAELQIVDRDDIDDVVLVALDGPRHGRLSVRGAKAFAFGVRDLREGAVVYEHSDSDTT
RDHIVFRISDGRHSIRHKFPINIVPRDDAPPFLVNNVALEVREGDALRLDPSALLASDLD
SSDARILFTVDAPPRAGRIVTRTSPREPGIPIAAFLQRELTQGLIFYQHSGDEIFEDSFD
VTLADAHAPPNLSQAYTVVVHVFPVADQLPVESPASVRHVTVKETQVAYITRAHLHFTHA
EHSHADLTYDVTRPCHSPQHPGLMDAGRLFHVDSVAALRRDPTAPALKSFTQHAVDHLKV
AYMPPLEDIGPDELTVQLVLSVSDRRGGGGAVAGVLFDITVTPVDDQAPQAFSNLLRVEE
GSWAFVTEEHLLVRDRDTRRPALRVELERLAQRGRLELRGRTLGRRDAFTLADLGGLAVR
YVHDDSETTEDDVGLRVTDGVNAVDVDLLVQVLPVNDEPPQLGGGLRGDLRCPEGGRVQV
TADYLAATDRDSDDAKLSYMLARRPARGELQRAGIPVDKFSQQDLLQGHVFYVHTGGEIG
PAPASDAVTLIISDGDAGGTDGCCHGDAPPVPLHGTLPVYDLNVTLLPVNNKVPAVILGA
SMMVVDEGSRACLCGGVLGASDPDSPPDRLTFHLDTKPLHGFLENIQPTPGYEKSNAGIP
IESFKLDELTSGFINYVQSEHKGAEPTAEQLLISVSDGLHHSASVPVYIIINPTNDEKPS
LQLANFTVKEGGTRELTRTLLDASDLDAPPDVLTFSLTGAPAHGSLKASAFRPPEGSSAS
LVSVTSFTLQELRQGLTLWYAHDGSETSEDRLTLRLTDGVHSLGATAAVVVLPVDDHPPR
LVKNAGAEAEPGVRRALTAAVLLADDVDTPPAKLFYLLHAAPRFGKLHLKTSETGLTELA
AGHNFTQDDVDANRLSYTPSADAAGFEGHDGFRFSLSDLEHRSSAHVFHITVRTARKGDI
SLRTGEVRVAEGQRAVLNTDFLRASDGGGRPDELVYTVTAAPRHGLLHSVARPGVPLSAF
TQMDVAAQRVCYTHDNGHRHHSDTFSFVVSNGERSRPGSVVFSIEAADRVPPTLEVNAGV
RVQDAGTAAVTAEHLRLSDAHAPASDLTFAIARPPRYGRLLLRGVPLGPSADPPTATVFT
QADVDGGHLAYRHDPGGRALDDSFYFLPGDGRNRGYLRYGRLRTEPAVFRIHVEHVDRSP
PVLTALGRPSEVVQLRDGRRALFITSRHLQATDDRSPPDQLRFAVVTPPRFGHLENVNTG
AYIRGRFTQRDVERRSLVFVVPADADVTEDNFLFRLSDPAGNAAVPQTLDLSWSRIELSA
SCFRTCETAGTLQIQIRRRGTSADPAYVAIRVQDGTAKVGRDFTHSTAALIQFDPGVDRK
TWSIYPEADGLEENDENLTVTLKDPKNAVLGRTTFARVEIVDPRGGRCDMSVAKADVAPP
LPPVTPPTLAEDDAILDVEAELMWESTAPPRGDVPNRRHFADDDGRGKPRDQAQPGHAQE
EVAGDAGNAGLEALSAGAKPDQKVWRFHSLTSLRPEEKAAPPAGGAAQESGPGNGPQTDR
ATSGKEEAELRHRKKSWKRDVFSTEYARNKETTTGRSPSSRCDEGWTHHRGRCYLPGSSV
SSRASAERSCSFLSDSGLPSVRSGRQLVWLWRFGGKKPFWIARSQLVETLTKGLGGVPSG
AVASSSSCLLAENSSRWTSGSCDVDAERAVICEAPPRPR
NT seq
6600 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagggagggggggcgctgggggcccagcagaggccgaaggacgcgtccgccggac
tctcgttctctattcggaggccccgccgctcccgggggttcgccggcgtgcgcgtggacg
ttggactgggccccggagacgcgcgacagcaggaacccttccgccaaacttctcgcccgg
cgcggcgggtccaagatggctgccttgagggcgctcctcctgctgctggcgggcgcgtcg
tcgtcgccagggaacggcgccctcgtggaggtgaacgcgggcatggaggtggtcaggggg
cgccgggccttcctgggcagggagcagctgaggatcgggacggaagccgacgcccactgc
aaggtggaggtggtcctgaacgagccaattacgcagcgggtgggacgcctcacgccgcag
atgtttgactgcgatttcctgccagaagaagtcatgtaccaacacaatggaagtcctctg
ttgaacagcgaccaagtcctactgcgagtctacaggttcaggtcttcggaaacatcggtg
gagtcggtgctcttgcagattcgcgtggtggaccggtcttcgggcctggcggacttgggc
acgaccccgctgacggttcgggacttctacgcgctgtccaacgccatcgacgactcggtg
gtgatcatccggagcccgggccgcgccgcgtgcaccgtgcgactgctcgccgccgccgga
gctctgactgccggtcggctggtgcggggggggggcgccctccagaggacaggccgcgaa
gcgccggcggcgccgtgcccaggaaacaaagcctgcgccagcggcgccgaggaagtcggc
ttcctgaagacgagctgccgggacttcgtgagttccggcctcaagtaccgacacctcagc
ccgccctcgcccgacctcgactacgtcgccatcaccgtcgaactgagggagcgggatacc
agggctgcgctggagacggagtctctctggctgccggtgcggatcgtcggggcgacgccc
aaccagccgccgcgggccgccttcgcggcgtccttcgtcctggaagtggaccagttcgtc
ctgaccccgatcaccaccgcctccctggacgcggaagaccccgagacccccaaggacggg
ctggtgttcaacgtgagcgccctgcccccccgaggctacgtcacccacctggaccggcac
accgagcccgtgcgctccttcgcctggtcggacctccaccgcctgaaggtggcgtaccag
ccgcccaacagcagccacctgacacgtgacaactttcagatggagttccaggccatcgac
gcgtcctacgcagccggtccgcccgtcgtgctgcacgtgtccatcaaggcggcggagacg
aacgcgccgcgggtgtcgtggaacacgggtctggacctgctggagggtcagtcgcgagcg
atcacgtgggcggagctgcagatcgtagaccgcgacgacatcgacgacgtcgtcctcgtg
gcgctggacgggccgcggcacgggcgcctcagcgtcagaggggcgaaggcgtttgcgttc
ggcgtgcgggacctgcgcgagggggcggtggtctacgagcactcggacagcgacaccacc
cgcgaccacatcgtcttccgtatcagcgacgggcgccacagcatccgccacaagttcccc
atcaacatcgtgccccgtgacgacgcgccgcccttcctggtcaacaacgtggcgctggag
gtgcgggagggcgacgccctccggctcgacccgtccgcgctcttggcctccgacctggac
tccagcgacgcccgcatcctcttcacggtggacgcccccccgagggccggccggatcgtc
accaggacctccccccgcgagccgggcatccccatcgctgccttcctgcagcgcgagttg
actcaaggtttaatcttttaccaacactccggagacgaaatcttcgaggactccttcgac
gtcacgctggccgacgcccacgcgccgcccaacctatcgcaagcttacacagtggtggtg
cacgtgttcccggtggcggaccagcttcccgtggaatctcccgcaagcgtgcgccacgtg
acggtgaaggagacgcaagtggcgtacatcacccgcgcgcacctgcacttcacccacgcc
gaacactcgcacgctgacctcacctacgacgtcacccgcccgtgccacagcccgcaacat
cctgggttgatggacgcgggtcgtctcttccacgtggacagcgtcgccgccctgaggcgc
gacccgacggcgccggcactgaagtcgttcacgcagcacgcggtggaccacctgaaggtg
gcctacatgccgcccctggaggacatcggacccgacgagctcaccgtccaattggtgttg
tcggtcagcgaccgtcgcggcggcggcggcgccgtcgccggcgtcctcttcgacatcacc
gtcacgcccgtcgacgaccaggcgcctcaggctttcagcaacttgttgcgcgtggaggaa
ggcagttgggcgtttgtgacggaggagcaccttctggtgcgagaccgcgacacccgccgg
ccggccctcagggtggagctggagcggctggcgcagcgcggccgtctggagctgcggggg
cggacccttggacgccgagacgcttttacgctcgcggatctcggaggactcgccgtcagg
tacgtccacgacgactccgagaccaccgaggacgatgtcgggctgcgcgtgacagacggc
gtcaacgcggtggacgtggacctgctcgtccaggttctgcctgtgaatgacgagcccccc
cagctaggcggcggcctgcgcggcgacctgcgctgcccggaggggggccgcgtccaggtg
acggccgactacctggcggccaccgaccgggacagcgacgacgctaagctgagctacatg
ctagcgcggcggcccgcaaggggggagctgcagagggcaggaattcccgtggacaagttc
tcgcagcaggacctcctgcagggtcatgtcttctatgtgcacacgggtggcgagatcggc
ccggctcctgcctccgacgccgtcacgctcatcatctccgacggcgacgcgggggggacg
gacggctgttgccacggcgatgctccgccggtcccgctgcacggcacacttcctgtgtac
gatctcaacgtcacgctacttcctgtcaacaacaaagttcccgctgtcatactgggagcg
tccatgatggtggtggacgagggttcccgggcgtgtctgtgcggaggtgtcctgggggcc
tcggaccccgacagcccccccgaccggctgacgtttcacctggacaccaaacctctgcac
ggcttcctggaaaacattcagccaacaccgggatacgagaaaagcaacgcaggaattccc
atagagtcgttcaagttggacgagctgacatcaggcttcatcaactacgtccaatcagag
cacaaaggggcggagccaacggcggaacaattgctgatcagcgtgagcgacggcctgcat
cactccgcctccgttcccgtctacatcatcattaatccgaccaatgacgagaagccgtca
ctgcagctcgccaactttaccgtgaaggaggggggcacacgggagctgacccgcaccctc
ctggatgcctccgacctggatgcccccccggacgtgttgaccttcagcctgacgggggcg
ccggcgcacggcagcctgaaggcgagcgccttccgtcctcccgaaggatcgagcgcttcg
cttgtcagcgtcacctctttcaccctgcaggagctgcgacagggcctgacgttatggtac
gcgcacgacggctcggagacctcggaggaccggctgactctgcgactgaccgacggcgtc
cactcgctcggcgccaccgccgcggtcgtcgtgctgcccgtcgacgaccacccgccccgc
ctcgtcaagaacgccggcgccgaggcggagcccggcgtgcgacgggcgctgaccgccgcc
gtcctcctggccgacgacgtcgacacgcctccggcgaaactcttctacctgctgcacgcc
gcgccgcgcttcggaaagctgcatctgaagacgagcgaaacgggcctgacggagctggcg
gcgggtcacaacttcactcaggacgacgtggacgctaaccggctaagctacacgccgtcg
gccgacgcggccgggttcgagggtcacgacggcttccgtttcagcctcagcgacttggaa
caccgaagctccgcccacgtcttccacatcaccgtccgcaccgcccgcaaaggcgacatc
tctttgcggaccggcgaggtgcgcgtggcggagggccaacgtgcggtgctgaacaccgac
ttcctgcgggcctcggacggcggcgggcgcccggacgagctggtctacacggtgacggcg
gcgccgcgccacggcctgctgcactccgtggcgcggcccggcgtgccgctgagcgccttc
acgcagatggacgtcgccgcgcagcgcgtctgctacacgcacgacaacggacaccgacac
cacagcgacaccttcagtttcgtggtcagcaacggcgagcggtcgcggcccggcagcgtc
gttttttccatcgaggcggcggaccgcgtcccgccgacgttggaggtcaacgcgggcgtg
cgcgtgcaggacgccggcacggcggccgtcaccgccgagcatctgcgcctcagcgacgct
cacgcgcccgcctccgacctcaccttcgcgatcgctcggccgccgcggtacggacgcctg
ctgctgcggggcgtcccgctcggcccgtcggccgaccccccgacggcgaccgtcttcacc
caggcggacgtcgacgggggccacctggcttaccggcacgacccgggcggccgggcgctc
gacgacagcttctacttcctgcccggagacggccgcaaccgaggctatctgcgatacgga
cggctgaggacggagccggctgtcttccgcattcacgtggagcacgtggaccggtcgcct
cccgtcctgaccgcgttggggcgccccagcgaggtggtccagctgagggacggtcgccgg
gcgctcttcatcacgtccagacatctccaggctacggacgaccgcagtccgcccgatcag
ctccggttcgcggtcgtcacgccgccgcgcttcggacacctggagaacgtcaacacggga
gcttacatccgaggccgtttcacgcagcgagacgtggagcgccgctcgctggtcttcgtg
gtacccgccgacgcggacgtgacggaagacaacttcctgttccgcctcagcgacccggcg
gggaacgccgccgtgccgcaaacgctggatctgtcctggtcccggatcgagctgtcggcc
agctgcttccggacctgcgagacggcgggaacgcttcagatccagatccgacggcgcggg
acgagcgccgacccggcgtacgtggccatccgggtccaggacgggaccgccaaagtgggt
cgggacttcacgcacagcacagccgcgctgatccagtttgatccaggcgtggataggaaa
acgtggagcatttacccggaggccgacggcctggaggagaacgacgagaacttgacggtc
acgctgaaggacccgaagaacgccgtcctgggccggacgaccttcgccagggtggagatc
gtcgaccccagaggaggacgctgtgacatgagcgtggcgaaggctgacgtggccccgccc
cttcctcccgttaccccgcccactctggccgaggatgacgccatcctggatgtggaggcg
gagctgatgtgggagagcaccgcccctccccgcggcgacgtcccgaaccgcagacacttc
gctgacgacgacggccgaggaaagccgcgggaccaggcgcaacccggacacgcacaggag
gaagtggccggggatgctgggaacgctggactcgaggcgctgtcagcgggagcaaagccg
gaccagaaagtctggaggttccacagtctgacatccctgcggccggaggagaaggcggca
ccgccggcaggtggcgccgcgcaggagagcggcccgggaaacggccctcagacggatcgc
gcgacaagtgggaaggaggaggcggagctacgccaccgcaaaaagtcgtggaagagggat
gttttttccacagaatacgcaagaaataaagagacgacgacggggagatcgccgagcagc
cggtgtgacgagggctggactcaccaccgggggcgctgttacctgcccggctcgtccgtc
agcagccgggctagcgccgagcgctcctgctccttcctgtccgacagcggtttgccgagc
gtccgctccggacggcagctcgtgtggctctggagatttggcgggaagaagccattttgg
atcgctcggtcccagctcgtcgaaacgcttacaaaaggcctcggcggcgttccgtccggc
gcggtggcgtcgtcgtcgtcgtgtttgctggcggagaactcgtcacgatggacgtcgggc
agctgcgacgtcgacgcggagcgcgccgtcatctgcgaggcgccgcctcgccctcgctaa
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