Phycodurus eques (leafy seadragon): 133406822
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Entry
133406822 CDS
T09682
Symbol
ushbp1
Name
(RefSeq) harmonin-binding protein USHBP1 isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pee03037
]
133406822 (ushbp1)
Cilium and associated proteins [BR:
pee03037
]
Primary cilia and associated proteins
USH complex and associated proteins
133406822 (ushbp1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
133406822
NCBI-ProteinID:
XP_061540770
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Position
8:16681801..16691843
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AA seq
687 aa
AA seq
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MEEFSLVRCDSLDTASGSDKELTTRFDHRSLYPEVAPSPAELDQCEAELGTLLSIIAEVN
KKMGSLKAPSDPGDLRPPRPPSPLFPDLLSHRLMRSIPEKNTASDVKCRPSLPYRGGCSI
MWAELKGALAAVEDSINCRRSWATPITSSDRDKPKEHLRAAQDSWAKATKILEEIEKEFG
ISCPSDVAKETFQEVFMEKGIDSPLSQAQVGELQGAHSISQVEEEKSKVGQQRAWRSAIY
SPPYRSSGTTGPLSTDRASSFPNSPLLLRRAAGGSLSSGGDSSPLSFVISGSPCPSPIGL
ETEIERLNRYIEKLKARNERLTVAFERRRAECEQISVTLKRFEADCSAMHLALRYCEECE
EAYSELLSLYDAQRQQSIPLQTNRAGVEDEQHSPSQQHNKMGSEELSTSFTIVEVTQEME
TDTAQRTPEPTDREVALRQLIERLKRDRAAIYLHKPRPHQAEVKMSPDAGYSAGMRVGHL
SKDNTKPGESKRDKTSLFHELITAREEMSDLRALIRLKEKELRCLEWSVVAQKAQEASEA
RVPESLREELGDCKTEQQRLCENAAKVCSDGDVAGLGTRPILKELQALLQREQALKKRLA
LVYDSLNATLPDSASNSRVSDEHVARIAQAHSKALSSYRHIRRRYREQVWKLEQKLAAMM
ESQHIQSETTTAAAGEDSDWRREETVL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttcagcttggtccgctgtgacagcctggatacagcgtctggcagtgacaag
gagctgacgacccgcttcgaccacaggagtctttatcctgaggtggcgccttcgccagca
gaattggatcagtgtgaagcagaactgggcaccctgctcagcatcatcgctgaagtgaac
aaaaagatgggctcactgaaggcgccaagtgacccaggtgatttgagaccaccaagacca
cccagccctctgtttcctgacctgctttcacacaggctaatgagaagcatcccagaaaag
aacactgcctctgatgtcaaatgtagaccttcactgccttaccgaggaggctgtagtatc
atgtgggcagaactcaagggcgctctggctgctgtggaggactccatcaactgcagaagg
tcctgggcaacccccatcacatcctctgaccgagacaaacccaaagagcatctgagagca
gctcaggacagctgggctaaggctactaagattttggaggaaattgaaaaggaatttggg
atttcttgtccatcagatgtggcaaaggaaacatttcaggaggtgttcatggaaaagggt
atagactctcctctctcgcaggctcaagtgggagaactccagggagcacacagcatcagc
caggtggaagaggagaagagcaaggttggtcaacagagggcttggaggtctgctatttac
tctcctccatacagatcttcaggcaccactgggcctctgagtacagacagggcctcttcc
tttccgaattctcctttactcctcagaagagctgcaggaggatcattatcttcaggaggt
gacagctccccactgagctttgttatctcaggaagtccttgtccaagccccattggcctc
gagactgagatagaacggctgaacaggtacattgagaagctgaaggccagaaatgaacgt
ctgactgttgctttcgagcgaaggcgggcagagtgtgagcagatcagtgttacactgaag
aggtttgaggccgattgctctgccatgcacttggctctcagatactgtgaagagtgtgaa
gaggcctacagcgaactgttgtcactttatgatgctcagaggcaacaaagcattcctctg
cagaccaacagagcaggcgtcgaggacgagcagcacagtccatcacagcagcacaacaaa
atgggaagcgaggagttgtccacctccttcacaatagtagaggtcacccaggagatggaa
acagacacagcacagagaactcctgaaccgactgatcgagaggttgcgctgcgtcagcta
attgaacggctgaaaagagaccgggcggccatttacctccataagccacgtccacatcaa
gcagaagtcaaaatgagcccggatgctggttactctgctggcatgagagttgggcactta
tcaaaagataacaccaagcctggtgaaagcaagagagataagacatctttgttccatgag
ctgatcacggccagggaagagatgtcagatctccgtgctctgattcgtctgaaggagaaa
gagctcaggtgtctggagtggagtgtggtggcccaaaaagcacaggaagcatctgaagca
cgtgttccagaaagcctccgagaggagcttggggactgtaagactgaacaacagaggctc
tgtgagaatgcagctaaagtgtgtagtgatggtgacgtggctgggctcgggacgaggccc
atattgaaagagctgcaggcactgcttcagagggaacaagccctaaagaagagactggct
ttagtttatgactcactcaatgcaacactcccagacagcgcttccaacagcagggtcagt
gacgagcatgttgcacggattgcacaagctcacagtaaggccttgagctcatacagacac
attcgcagaaggtacagggagcaggtgtggaagctagagcagaaactagcagccatgatg
gagagtcagcacatccagagtgaaacgacgacggcggcggcaggggaagattcagattgg
aggagggaagagactgttctgtaa
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