Phycodurus eques (leafy seadragon): 133407352
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Entry
133407352 CDS
T09682
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03020
RNA polymerase
pee03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133407352 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
133407352 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133407352 (polr2b)
03400 DNA repair and recombination proteins [BR:
pee03400
]
133407352 (polr2b)
Enzymes [BR:
pee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133407352 (polr2b)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
133407352 (polr2b)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
133407352 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
133407352
NCBI-ProteinID:
XP_061541124
LinkDB
All DBs
Position
9:complement(29728822..29758101)
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AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAFTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTKETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPDNDDELDSSNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTT
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagataaccagtatgatgaagatgacgacgagatcacgccagat
ctgtggcaggaagcttgctggattgtcatcagctcgtattttgacgagaagggtttggtg
cggcagcagctggattccttcgacgagttcatccagatgtcggtccagaggatcgtggag
gacgcgccgcccatcgacctgcaggccgaagcccagcacacctcgggagaggtggaggag
cccccgcgttacctgctgaagttcgagcagatctacttgtccaagcccacccactgggaa
cgagacggcgccccgtcacccatgatgcccaacgaagctcgactgcgaaacctcacatac
tcggcccctctgtacgtggacatcaccaagaccatcatcaaggagggcgaagaccagctg
cagacgcagcaccagaagaccttcatcgggaagattcccatcatgctgcgctccacctac
tgcctgctcagcggcctgaccgaccgtgacttgtgcgagctcaacgagtgcccgctggac
cccggcggatacttcatcatcaatggctcggagaaggtgctgattgctcaggagaagatg
gccaccaacacagtgtacgtgttcgccaagaaggactccaaatatgccttcacgggcgag
tgccgctcctgcttggagaactcgtcgcggcccaccagcaccatctgggttagcatgatg
gcgcgaggaggacagggcgtgaagaagagcgccatcggccagaggatcgtctccacgctg
ccgtacatccgacaggaagtccccatcatcatcgtgttccgagcactgggcttcgtgtcc
gaccgggacatcctcgagcacatcatctatgactttgatgaccctgagatgatggagatg
gtgaagccgtcgctggacgaagccttcgtcatccaggagcagaacgtggccttgaacttc
atcgggtccaggggagccaaacctggagtcacgaaagagcggaggatcaagtacgccaaa
gaagtcttgcagaaagaaatgctgccgcacgttggcgtcagcgacttctgcgagaccaag
aaggcctacttcctcgggtacatggtccacaggctgctgctggccgctctgggcagacgt
gagctggacgacagagatcactacggcaacaagaggctggacctggccggaccgctcctg
gcgttcctcttcagaggaatgttcaagaaccttctgaaggagatccgcatctacgcacag
aagttcatcgaccgaggtaaagacttcaacctggagctggccatcaagaccaggataatc
tcggatggactcaagtactcgctggccacgggcaactggggcgatgtcaagaaggcccac
caggcccgtgcgggcgtgtcccaggtgctgaaccgactcaccttcgcgtccaccctgtct
cacctgcgccgcgtcaactctccgatcggacgcgacggaaagctggccaaaccccgacag
ctgcacaacacgctgtgggggatggtgtgccccgccgagacccccgagggtcacgctgtg
ggcctggttaagaacttggccctgatggcttacatctctgtgggatctcaaccttctccc
atcctggagttcttggaggagtggagcatggagaacctggaagagatctcgcctgctgcc
attgctgacgccacaaagatcttcgtgaacggctgctgggtcggaatccacaaggatccc
gagcagctgatgaacacgctgaggaagcttcggcgccagatggacatcatcgtgtctgag
gtgtccatgatccgagacatcagagagcgcgagatcaggatctacacggacgccgggcgc
atctgcagacctctcctgattgtggagaagcagaaacttttgcttaagagaagacacatt
gaccagctcaaggagagagagtacaacaactacagctggcaggacctagtggcgagcggc
gtggttgagtacatcgacacgctggaggaggagacggtgatgctggccatgacccccgat
gaccttcaggagaagggtgtggcctactgctccacctacacccactgtgagatccacccg
tccatgatcctgggggtctgcgcctccatcatcccctttcccgatcacaaccagtctccc
aggaacacgtaccagtcggctatgggcaagcaggccatgggcgtgtacatcactaacttc
cacgttcgcatggacacgctggcacacgtcctgtattaccctcagaagcctctggtgacc
acacgctccatggagtacctgcgcttcagagagctgcccgcaggcatcaactccatcgtg
gccatcgcctcgtacacgggatacaaccaggaggactcggtcatcatgaaccgctcggcc
gtggaccgaggattcttccggtctgtcttctatcgctcctacaaagagcaggagtccaag
aagggcttcgaccaggaggagatcttcgagaaacccaccaaggagacctgccaggggatg
agacacgccatctacgacaaactggacgacgacggtctgatagccccgggtgtacgtgtg
tccggcgaggacgtgatcatcggtaagactgtgactctgcctgacaacgacgacgagctg
gacagcagcaacagacgctacacgaagcgagattgcagcacctttctgcgcaccagtgag
accggcatcgtggaccaggtcatggtcacgctcaaccaggaggggtacaagttctgcaaa
attcgggtgcgttctgtccgaatccctcaaatcggagacaaatttgccagcagacacgga
cagaaaggaacctgcgggatccagtacagacaggaggacatgccgttcacgtgtgagggc
atcacgcccgacatcatcatcaaccctcacgccatcccgtccagaatgacggtcggacat
cttattgagtgcctgcaaggcaaggtttctgccaacaaaggcgaaatcggcgatgccacg
cccttcaacgatgctgtcaacgtgcagaaggtctccaacctgctctcagaatacggttat
cacctgagaggaaatgaggttctgtacaacggcttcacgggccggaagctgacgtctcag
atcttcatcgggcccacgtactaccagcgcctcaagcacatggtggacgacaagatccac
tccagggcccgcggacccgtgcagatcctcaacaggcagcccatggagggacgctcgcgc
gacggcggccttcgtttcggcgagatggagcgcgactgtcagatcgctcacggcgccgct
cagttcctgcgcgagcgtctgttcgaggcgtccgacccctaccaggtgcacgtgtgcaac
ctgtgcggactcatggccatcgccaacacgcgcacgcacacctacgagtgtcgcggctgc
cgcaacaagacgcagatctcgttggtgcgcatgccctacgcgtgtaaacttctcttccag
gagttgatgtccatgagcatcgcgccccgcatgatgacgacgtag
DBGET
integrated database retrieval system
