Phycodurus eques (leafy seadragon): 133407409
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Entry
133407409 CDS
T09682
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04120
Ubiquitin mediated proteolysis
pee04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133407409 (syvn1)
04120 Ubiquitin mediated proteolysis
133407409 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pee04121
]
133407409 (syvn1)
Enzymes [BR:
pee01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133407409 (syvn1)
Ubiquitin system [BR:
pee04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133407409 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
133407409
NCBI-ProteinID:
XP_061541254
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All DBs
Position
9:5356612..5385360
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AA seq
624 aa
AA seq
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MARATLVTVTSLALTGAVVVHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLVFLKCFHWLA
EDRVDFMERSPNISCLFHFRVLSLMGLLGVLDFLFVYHACQSIINRGASVQLVFGFEYAI
LLTMVLTVFIKYVLHTVDLQSDNPWDNKAVFMLYTELFTGFIKVLLYIAFMTIMMKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNQTPTPAQAAPPAPVAPAHAPA
AQPANVAPGMLPGFPPGLFPFWGPFPAMPPPAAAAPPGAADAPQGSTEAAQAAGTSQSTS
SGADPATAATPGSAMPGFPFSIPPSPFPTAPWLPMPPPPPPFMSSMPPPPPSLSQLSEEE
LRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRSDSGSAGEASGTN
NLASLATASAGTDKPSREKNSSPSLSSAPVQMDDSTPTSTTWDSERRDKTDEGSEDEVGE
PNAAELRRRRLRKLETAPLPPADD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcaaccttggtgaccgtcaccagtctggcattgactggtgctgtggtggtg
cacgcttacctcctcaaacaccagttttacccaactgtagtctacctcaccaagagcagc
cccagcatggcggtcttgtacattcaggcctttgtattggtgtttcttctgggaaagttc
atgcggaaagtgttttttggacagctaagggctgcagaaatggagcatctcattgaacgt
tcgtggtacgcagtgaccgagacgtgcctggccttcactgtcttcagggatgacttctcc
ccacgctttgttgccctcttcacacttctggtcttccttaagtgcttccactggttggct
gaggaccgagtggattttatggaacgaagtccaaacatatcctgtctttttcactttaga
gtcttatcattgatggggctgttgggagtgttggactttctgtttgtttaccatgcctgt
caaagtatcatcaaccgaggagcctctgtccaacttgtttttggctttgagtatgccatc
ctgttgaccatggtattgacagtgttcatcaagtacgtcctgcacactgttgatttgcaa
agtgacaatccttgggacaacaaggctgtctttatgctctataccgagctcttcactggt
ttcatcaaagttctcctgtacattgcctttatgactattatgatgaaggttcacactttc
cccctgtttgccattcggccaatgtatctggctatgagacaatttaagaaagctgtaact
gatgctataatgtctcggagagccatccgcaacatgaatacactctaccctgacgccact
cctgaagatctgcaggcctctgacaacgtttgtatcatctgtcgggaggaaatggtcact
ggagcaaagaaactaccttgtaatcacattttccactccagttgcttgcggtcctggttc
cagaggcagcagacctgccccacctgtcgtatggacgtccttcgggcgtctaataatcag
acccctacccctgcccaggctgcgccccctgctccagtagcccctgcgcatgctcctgct
gcccagccagctaatgtggcacccggcatgttgcctggcttcccaccaggtctctttccc
ttctggggtccctttcctgccatgcctcctccagctgcggcagctcctcccggtgctgcc
gacgcaccacagggcagcacagaggcagcacaggcagctggtaccagccagtccacttca
tccggtgcagacccggccacagctgccactccgggctctgcgatgcctggatttcccttc
tccattcccccatctcccttcccaactgcaccgtggctgcccatgccaccacctcctcct
cctttcatgtcgtccatgcctcctcctcctccgtctctgtcccaactgtcagaggaggag
ctgagggagctggaggctgagggtcgacggggcctggaggccaggctgcagtgtctccaa
aacatccataccctgctggatgccgccatgcttaacatccaccattacctcagcacagtc
gccacacttactcctccgaggtctgacagtggcagcgcaggagaagccagcgggacaaac
aacttggcttcattagccaccgctagtgcaggcacagacaagccgagtcgggagaaaaac
tcctcccccagcttgagcagcgctccagtccaaatggacgactcgactcccacatccacc
acttgggatagcgagagaagagacaagactgatgaaggatcggaggacgaggttggcgag
ccaaacgctgcagagttgaggcgccggcggcttcggaagctcgaaacggcacctcttccg
cctgcagacgattga
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