Phycodurus eques (leafy seadragon): 133408034
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Entry
133408034 CDS
T09682
Name
(RefSeq) ATP-dependent RNA helicase DDX19B-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03013
Nucleocytoplasmic transport
pee03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133408034
03015 mRNA surveillance pathway
133408034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133408034
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133408034
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133408034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
SMC_N
Motif
Other DBs
NCBI-GeneID:
133408034
NCBI-ProteinID:
XP_061542496
LinkDB
All DBs
Position
1:29652352..29703889
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AA seq
459 aa
AA seq
DB search
MTLVNRPGNIARDVNGNFERDMGGQDRKWEGDKVDLAEVSLLNKIIRRTLVRSRHEVEVL
QRDPTSPLFSVKTFEELRLKPELLTGVYDMGFNRPSMIQEKALPMMLAQPHQNLIAQSQS
GTGKTAAFSLAMLSHVNTANKWTQALCIAPTYELALQIGQVMEQMGKHCPDVKLAYGIRG
NKVERGRQLQEQIVVGTPGTILDWCIKFKVIQAKKITMFVLDEADVMIDTQGHRDQSIRI
HRQLTKDCQMLLFSATFEEEVWRFAEMIVPEANIIRLRREEETLDTIKQFYVLCRSKEDK
FNILCDLYGSMTVAQAMIFCHTRKIASWLSANLTKEGHSVALLSGELTVTQRASIIERFR
DGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPVDMDGNADNETYLHRIGRTGRFGRRGFAI
NMVDSEHGMDVIRQIEIHFDRKIPKLDTRNVEEIEKQLN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgactctggtgaatcgtccagggaacatcgccagagatgtaaacggaaatttcgagagg
gacatgggcggacaagatcgaaagtgggaaggagacaaagttgacctggctgaagtgtcc
ctgctcaacaaaattatccgccgcactctagtaaggagtagacatgaggtcgaggtcctg
cagcgggaccccacctctccgctgttctccgtcaagaccttcgaggagctgcgcctgaaa
ccggagttgttgacgggggtctatgacatgggcttcaacaggccttccatgatccaggag
aaggctctacctatgatgctggcacagccacatcagaatctgatcgcccagtcacagtca
ggcacaggcaaaactgctgctttttctctggccatgctcagtcacgtgaacactgccaac
aagtggactcaggctctttgcatcgcccccacatacgagcttgccctgcagatcggtcag
gtgatggagcagatgggcaaacactgccccgacgtcaagctggcatacggcatcagaggc
aacaaagtggagcgaggcaggcagttgcaggaacagatcgtcgtgggaacaccgggcacc
atcctggactggtgtattaagtttaaagtcattcaggccaaaaagataaccatgtttgtg
ctggatgaggccgacgtcatgatcgacactcagggtcatcgtgaccagagcatccgcatc
cacaggcagctaacaaaagactgccagatgctcctcttctctgcgacctttgaggaggag
gtatggaggtttgcggagatgatagttcccgaggccaacatcattcgactgcggcgggag
gaggagactctggacaccatcaagcagttttatgtcctctgcaggagcaaggaggacaag
ttcaacattctgtgtgacctctatgggagtatgactgtggcacaggctatgattttctgc
catactcgtaagattgcatcatggctgtctgctaacctgaccaaggagggccacagtgtg
gcgctgctgagtggggaattaactgtgacgcagagagctagcatcattgaacgctttcga
gatggcaaggagaaagtacttgtcaccacaaatgtttgttccaggggcatcgatgttgaa
caggtatctctggtggtaaactttgacctccctgtggacatggacggcaatgccgataat
gagacgtaccttcaccgcattggccgtacaggacgttttggaaggcgaggcttcgctatc
aacatggtggacagcgagcacggaatggatgtcatcagacaaattgagatccatttcgac
aggaaaatacccaaacttgacacacggaatgttgaagaaatagaaaaacaactcaactga
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