Phycodurus eques (leafy seadragon): 133408311
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Entry
133408311 CDS
T09682
Symbol
pbrm1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133408311 (pbrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133408311 (pbrm1)
03036 Chromosome and associated proteins [BR:
pee03036
]
133408311 (pbrm1)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133408311 (pbrm1)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
133408311 (pbrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
133408311
NCBI-ProteinID:
XP_061543025
LinkDB
All DBs
Position
10:complement(17391915..17415435)
Genome browser
AA seq
1632 aa
AA seq
DB search
MALKRRRATSPSSSVSGGDFDDSQPSSLVSSSGRKRRKTSNIPTVDPIAVCHELYNTVRD
YKDDQGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVEQLTSDFQLL
FHNAKTYYKSDSAEFRAACNLWDLYQRTKNEFVQPGDDDEDDEAGYDAQDIPSGSTEDES
APICLRDVLEHLLDAVVTYAEPSGRLVSDLFQRLPSKAQYPDYYAIIKEPIDLKLVAQKI
QMGHYRSVTAMAKDIDLLVRNAKIYNEPGSQVFKDANTIKKIFAQKKSEIEHGEPIKSSI
RIRNRRFAQGERLSAISMALQYESDEDGILSGSVHYDEGESEAESLTTNIDMSNPIFQLY
EAVRGARNNQGLLISEPFQELPSRKEYPDYYQQITQPLCLHQIKNKMKNNEYDSVEPMDS
DLTLMFDNAKRYNLPHSSIYKRALKLQHIQQIKRKELFQRDDDDGDSMLSCATSDTSSTK
RKSHKKNTKKNRMKALFASVTDAREAGTSRRLCDLFMVKPSKKDYPDYYKIILEPMDLKT
IEHNIRSDKYLSQDAMVEDMKLMFRNARHYNEEGSQVFNDADVLEKIMTDRRKDLGPVTD
EDDIVSSKMKIRKTNMTLKKSKYLTPLQQKLNELYESVKNYTDKRGRRLSTIFLRLPSRA
ELPDYYIAIKKPVDMEKIKSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYRDALV
LHRVLLETRHALEGGEDAYVPDVPRLIQELIRSLFVSVLGHQDDEGRCYSDSLAEIPAID
PANPEKPPLNFEIIRKNVDGGRYMRLDVFQDHMFEVLEKARHLNRTDSEIFEDAVELLQF
FIRIRDELCKNGEILMSPALSYTSKHLHNDVDKEKKQKLPKEIEEDKVKREEEKMEAEKR
EESVGASWQLSSQRTYSQDCSFKDSMYCVGDYVYVEPAEPNLRPHIIYIERLWQDDTGEK
WLYGCWFYRPNETFHVATRKFLEKEVFKSDYYNKARISKILGKCVVMFVKDYFKLSPEGF
RAEDVHVCESRYSAKSKSFKKIKLWTMPLSSVRFVPREVPLPVVRVASIFAPKEERDEKL
TEITDETKVIECSTICKEREDVPLEMTNGEAGCQYYEQLCHNNLWLKVGDCVYIGSHGLV
RHRVGRIEKMWMRDGAGYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEEACPMTCIIGK
CVVSSFKEYLSCRPTEVPEENVLLCESRYIESERQMKRFKGLKRFSSSGKVVEDEIYYFR
KLISPPKEPSPLLDRKIEELEAKFADMTDEELEELGDDDSELDHSLRQMHSSMCSDMDIM
TYTPPQSTKSLKGLSKKEGSKRKINMSGYILFSSEMRAVIKARHPDFSFGELSRLVGTEW
RNLESSRKAEYEERAAKVAEQQERDRTQFMTSPRAGTPVGALIGVVPAPTPMGMLNPGLT
PVSEGMMGACRSAMIPKGMVSMTGEPPHHTGEPLYPQRSLLAMPGFPGIPYFGINGMCGE
TGTANIHGSQMSLMGPGQQAPPPYPGQGQAALQQPSTPLFVSPPAKSQRLLHSDAYLSYI
EGLTAESPTVSKWDQTLSVKKHDVRLTKEQESRLPSHWLKSKGAHKTMADALWRLRDLML
RDTLNIRYTHNL
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaaagaagaagggctacatccccctcgagcagtgtgagtggaggagatttc
gacgatagccagccttcatccttagtgtcttcaagtgggcgaaagaggagaaagacctca
aacattccaaccgtggatcctattgctgtgtgccatgaattgtacaacacagtcagagac
tacaaggatgaccaaggcaggatgctgtgcgagctgttcatcagagcccctaaacgaagg
aaccagccagactattaccacgtggtgtctcagcctatcgacatgatgaagattcagcag
aaattaaagatggaggaatacgatgacgtcgaacagctcaccagtgactttcagctcctg
tttcataatgccaaaacatattataagtccgatagtgctgagttccgagcagcctgcaac
ctgtgggacctttaccaacgtaccaagaatgaatttgttcagccaggcgacgatgatgag
gatgatgaggccggctacgatgcgcaagacatccccagcgggtctactgaggatgagagt
gcaccgatctgcttgagagatgtccttgagcatctcctcgatgccgtggtgacatatgcc
gagccctcgggccgcctggtcagcgatctctttcagaggttgccctccaaagcgcaatat
ccagattattatgcaatcatcaaggagcccatagatttgaaactcgtcgctcaaaagatt
cagatgggccactacaggagcgttactgccatggctaaagatatcgatttattggtcaga
aatgccaaaatttacaatgagcctggatcacaggtctttaaggatgcaaataccattaaa
aagatttttgcacaaaagaagtcagagattgaacacggagaaccaatcaagtccagcatt
cgtatcaggaataggaggtttgctcagggtgagcgcctctctgcgattagcatggctctt
cagtatgaaagtgacgaggacggaatactttctgggtctgttcactatgacgagggggag
tctgaggctgagagtttgaccactaacatcgacatgagcaaccccattttccagctgtat
gaagctgtacgcggtgccaggaacaaccagggcctcctgatttctgaacctttccaggag
ctgccctctaggaaggaatacccagactactaccagcagatcacgcagcccttgtgcctc
catcagatcaagaacaagatgaagaacaatgagtatgacagtgttgagcctatggactct
gatctaacgctaatgtttgacaatgccaagcgttacaatcttccccactcctccatctac
aagcgggcacttaaattgcagcacattcagcagataaagcgaaaggagctttttcagaga
gatgacgacgatggagacagcatgctttcctgtgccacctctgacaccagtagcactaag
agaaaaagtcacaagaagaatacaaagaaaaatcgaatgaaagctctttttgcttcggtc
accgacgcacgggaggcgggcactagcaggcgactttgtgacctctttatggtaaagccc
tccaagaaggactaccccgattactacaagatcatcctggagcccatggacttgaaaacc
atcgagcacaatatccggtcagacaagtacctcagtcaagatgccatggtagaggatatg
aagctgatgttccgcaatgctcgacactacaatgaagagggctcacaggtcttcaatgat
gctgatgtgctcgaaaaaataatgacagacagacgcaaggatcttggaccagtgacagat
gaggatgacatagtgtcctcaaagatgaaaataagaaagacaaacatgactctgaagaaa
tcaaagtatcttacacccttacaacagaagctgaatgagttgtatgagtctgtcaagaac
tacacagacaagcgtggccgtcgcctcagcacgatcttcctgcgccttccatctcgtgct
gagctgcctgattactacatagctatcaagaaaccggtggacatggagaagatcaagagc
cacatgttagccaataaatatcaggatgtagatgcactggtagaggacttggtgctcatg
ttcaacaatgcatgtacgtacaatgagcctgagtcgctgatttaccgggatgctctagtc
ctgcaccgtgtgcttctggagacgaggcacgccctggagggaggtgaggacgcttacgtg
ccagatgtgcctcgcctcatccaggagctcatccgcagcctctttgtctcggtgctcggc
caccaagatgatgagggccgttgctacagcgattctctggccgagatccctgccattgat
cctgcaaacccagagaagccccctctcaattttgagataatcagaaagaatgtcgatgga
ggtcgctatatgaggctggatgtatttcaggaccacatgtttgaagttttggaaaaggcc
agacatctaaataggacagactctgaaatctttgaagatgccgtcgagctgctgcagttc
ttcatcaggatccgagatgagctgtgtaagaatggagagattttgatgtctcctgcactg
agctatacgtccaaacatctgcataatgatgtggataaagaaaagaaacaaaaactccct
aaagagattgaggaggacaaagtcaagagagaagaggaaaaaatggaagctgaaaagcgg
gaggaatctgtcggagcctcctggcagctgagctcacagcgcacatacagtcaagactgc
agcttcaaagacagcatgtactgtgttggagactatgtttatgtggagcctgctgagcca
aacctgcggcctcacatcatctacatcgaacgcctgtggcaagacgacactggtgagaaa
tggctctatggatgctggttctacaggccaaatgaaacgttccatgtcgctacacgaaag
ttcttggagaaggaagtatttaagagtgactattacaacaaagcacgcatcagcaagatt
ttaggcaaatgtgtggtaatgtttgtgaaggactacttcaaactttccccagaaggcttc
agggcagaggacgtccatgtctgcgagtcacgctactctgccaagtccaagtccttcaag
aagatcaagttgtggaccatgcccttgagctcggttcgctttgtcccaagagaagtgcct
cttcctgttgtacgggtggcatccatatttgccccgaaagaagagagagacgagaaacta
acagaaattacagatgaaaccaaagtgatagaatgtagcaccatatgcaaggagagggaa
gatgttcctttggagatgactaacggggaagcaggatgccaatactatgaacagctttgc
cataacaacctgtggctgaaagttggagactgcgtctatattggctctcatggactagtg
cgccatcgcgtgggcaggattgaaaaaatgtggatgcgagatggagccggctactttttt
ggcccaatcttcatccatccagaggaaacggagcatgaacccactaaaatgttctacaag
aaggaagtttttctaagcaaccttgaagaagcttgtcccatgacctgcatcatagggaag
tgcgtggtgtcatccttcaaagagtacctatcttgtcggccaactgaagtgcctgaagag
aatgtcctgctctgtgagagtcgttatatcgaaagtgagaggcaaatgaagcggttcaaa
ggactcaaacgcttttcatcatccggaaaggtggtggaggatgaaatctactattttagg
aaacttataagtcccccaaaggagccgtcacctttgctagacaggaaaattgaggaactg
gaggccaagtttgctgatatgacagatgaggagctagaggagcttggggatgatgacagt
gagctcgatcattctcttcggcagatgcattcttctatgtgtagtgacatggatataatg
acttacactcccccacagtcaaccaaatctctaaagggtctttccaagaaagagggctca
aaacgaaagatcaacatgagcggatacatcctgttcagcagcgagatgcgggccgtcatt
aaagcccggcacccagatttctcctttggcgagctgagccgtctcgttggcacagagtgg
aggaacctggaaagttctaggaaagcagagtatgaagagcgagcagctaaagtggccgag
cagcaggagcgtgacaggacccagtttatgacatccccacgtgcaggtaccccagtaggg
gcactgataggagtggtgcctgctccgacccccatggggatgctaaatcctggcttgacg
cctgtgtcagaaggtatgatgggtgcatgtaggtcagctatgatacccaaaggaatggtt
agtatgactggcgaaccaccacatcacacgggggagcctttatatccccagcgttcgctg
ctcgctatgcctgggttccctggaatcccatatttcggtatcaacggtatgtgtggtgaa
actggaacagcaaacatacatggatcccagatgagtttgatgggtcctgggcaacaggct
cccccaccatacccaggacaaggccaggctgcccttcagcagccctccaccccgttgttt
gtgtcccctccagccaagtcccagaggcttctccactctgatgcttacctcagctacata
gagggtctaactgctgagtcacctactgtgagcaagtgggaccaaacactttcagttaaa
aaacatgatgtgcgcctgacaaaagagcaggaaagtagattgccatcccactggctgaag
agtaaaggagcccacaagacaatggctgatgcactttggcgactgcgtgacctgatgcta
cgagatacgctgaacattcgctacacacacaacctgtag
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integrated database retrieval system