Phycodurus eques (leafy seadragon): 133408797
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Entry
133408797 CDS
T09682
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133408797 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133408797 (smarcc2)
03036 Chromosome and associated proteins [BR:
pee03036
]
133408797 (smarcc2)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133408797 (smarcc2)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133408797 (smarcc2)
PBAF complex
133408797 (smarcc2)
GBAF(ncBAF) complex
133408797 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
133408797
NCBI-ProteinID:
XP_061544014
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All DBs
Position
10:15917129..15940362
Genome browser
AA seq
1106 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLTMKSFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEAKLLGKLKDIIKRHQGSVTDDKSSSSHVVVP
IPSSLEEEEWVRPVMKKDKQVLLHWGYFPDSYDTWIPASEIEASVEDAPSQEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGHPKRKRISAKTLTDEVTTPDERRDKKPVGAKKRKRSPS
PSPTPPPQESKKKNAKKGPTTPYTKSKRGQREEEQEDLSKDLDDASPVPASEDGNAVKTN
STKKDSDSTPVKGGADMDEQEDESMEVTGKEEEEGSPSVKGEPVKGLDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQTPTPQQMLPFPDKVKDKPADLQNFGLRTDMYSKKLGSSKSKSAANSMRDWTEQ
ETLLLLEGLELYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEESYSSLGPLAYQPV
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALVWFGAATIKDKLRLQRTIKTAERIVGT
SLSTLEDLHAARTKIRACKILSDPPNPGHQLFQLLPSEEFSRMKEEVPAALVEAHVRRVE
EAARVSGRQDPLYGLEGSGIAGTGLEEGERPDENNDESKSDSQSNEEKKDAKDCKDGASE
EEEKVAENGKKEEERGREAEGEREAEKAESEMGDGVKEKDGKRGEEGHREGESEGEKKAK
VERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEE
LETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQAGGPHPP
QTALGSQGSASGQQSASTPAPQPSPSATGPGPESQPPPGAHTSPPCPPGQTVSGHSSSSS
APALHESNTPVPAETVHPSASVPPSQ
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacggaagaaagacggcggcccgaatgtcaaatatttcgaagcgtctgataca
gtctctcagtttgataatgtgcgcgtctggctgggaaagaattacaaaaagtacatccaa
gcagagcccccaaccaacaagtctctgtccagtcttgttgtccagttgctccaattccaa
gaggaagtgttcggccgacatgtcagcaaccccccgctcaccaagctgactatgaaatct
tttctggacttcaaggctggaggtgctctttgccacatcttggcggctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccatccaggatggaccgaaac
gtggagatgttcatgacgattgaaaagtccttagtgcagaataactgcttgagtcgacca
gtcatctacttgagttctgacatcgaggcaaaactgttggggaagctgaaagacatcatc
aagagacatcagggctcagtgactgatgacaaaagctccagctcccatgttgttgttccg
attcccagcagcttggaagaagaggagtgggtacgccctgtgatgaagaaggataagcaa
gtactccttcattggggatattttcctgacagttatgacacctggatcccagctagtgag
attgaggcctctgtggaagatgcccccagccaagagaagccaaggaaggtccatgcaaag
tggattttagacttggaccagtataacgagtggatgaatgaggaggactacgaagtggga
gaaggccaccctaagaggaagaggatatcggccaagactcttacggacgaggtgaccact
cctgacgagcggagagacaagaagcccgtcggtgccaagaagaggaagcgttcaccgtca
ccgtctcccacaccaccaccgcaggaaagcaagaagaagaacgctaaaaaagggccgaca
accccgtacactaaatccaaacggggccagagggaagaggaacaagaggatctcagtaag
gacttggatgacgcatcacctgttcctgcatctgaagacggaaatgcagtcaaaacgaat
agcaccaagaaagactctgattcaacaccagtcaagggaggagcagatatggatgagcaa
gaggatgagtccatggaagtaacgggaaaggaagaggaagagggctccccgagtgttaag
ggggaaccggtcaaaggcttggaccttcacgaggacaacgtgacggaacagacgcatcac
atcatcataccaagctacgctgcctggtttgattacaacagcgttcatgctattgagcgt
agagcccttccagagttcttcaatgggaagaataaatctaaaacccctgagatctacctg
gcatacaggaacttcatgattgacacttaccgactaaaccctcaggagtacctcacctcc
accgcctgccgcaggaacctggctggagatgtatgcgcaatcatgagagtccatgcattc
ctagagcagtggggactgatcaactaccaggtggactctgagagccggcccacccccatg
ggccccccacccacttcccacttccatgtcctggcagacactccatccagtcttgtgccc
ttacagcccaagacgtcccagactcccacaccccagcagatgttgcccttcccagataaa
gtgaaggataaaccagcagacctgcagaactttggcttacggactgatatgtacagcaaa
aagttgggctcttcgaagagcaagagtgcagcaaactctatgagggattggacagagcaa
gaaacactactactacttgagggattggagctgtacaaggacgactggaacaaggtgtca
gagcacgtcggcagccgcacgcaggacgagtgtatcctgcacttccttcgcctgcccata
gaagacccctatctggaggaaagctactcctccctgggaccactggcttaccagccggtg
cctttcagccaagcaggaaaccccgtaatgagcacagtggcattccttgcctccgtcgtg
gacccccgcgtggcctctgcagctgcgaaatctgctctggtctggtttggtgctgctaca
ataaaggacaaactccgactgcaacggacaatcaaaactgctgaaaggattgtcggtacc
tccctatccaccctcgaggacttgcacgctgccagaactaagataagagcgtgcaaaatc
ctctcggaccctccaaatcccggtcaccagctcttccaactccttccctcagaggagttt
tctcgtatgaaagaggaagttcctgcggccctagttgaggctcacgtgcggcgggtggag
gaggcggcgagggtcagtgggcgacaggaccctctatatggcctagaaggtagcggcatc
gctggtactggcctggaggaaggcgagagaccggatgaaaacaatgatgaaagtaagagt
gacagccagtccaatgaggagaagaaggatgccaaggactgcaaagatggcgcaagcgag
gaagaagagaaggttgcagagaatgggaagaaagaagaggaaagaggaagagaagctgaa
ggcgagagggaggcggaaaaagccgagtctgaaatgggtgacggcgtgaaggaaaaggat
ggaaaaagaggtgaggaagggcatagagaaggtgagagtgaaggagaaaagaaggccaag
gtcgagcgggatgtgggtgagggcaaccttgccactgctgctgcgtctgcgctcgctgca
gcagccgtcaaagctaagcacttggctgccgtggaggagaggaagatcaaatctctggtg
gcactcctggtggagactcaaatgaagaaactagagatcaaattgcgacactttgaggaa
ctggaaaccatcatggacagagagagggaggctctagagtaccagcgacagcagcttctg
gccgaccgtcagtcgttccacatggagcagctcaagtacgccgagatgagagctcgccag
cagcacttccagcagatccagcatcagcagcacagccaagccgggggtcctcatcccccc
cagaccgctttgggctcccaaggctcggcctcgggccagcaatccgccagcacgccggcg
ccgcagccatcccccagcgccacggggccgggtccggagtctcaaccgcctccgggtgcc
cacacgtcacccccgtgtcccccaggccagaccgtgtctggccactccagctccagcagt
gcccctgcactccacgaatccaacactcctgtaccagccgaaacagtccatccctctgct
tcagttccaccttcacagtga
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