Phycodurus eques (leafy seadragon): 133409061
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Entry
133409061 CDS
T09682
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133409061 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133409061 (smarcd1)
03036 Chromosome and associated proteins [BR:
pee03036
]
133409061 (smarcd1)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133409061 (smarcd1)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133409061 (smarcd1)
PBAF complex
133409061 (smarcd1)
GBAF(ncBAF) complex
133409061 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
133409061
NCBI-ProteinID:
XP_061544559
LinkDB
All DBs
Position
10:complement(26269248..26279935)
Genome browser
AA seq
514 aa
AA seq
DB search
MAARGGFQSVPTGGGGGVMGPGPPVPGAGPGMGTGTPSGRMGPSPAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGGSPVSRPGMPGVMDPSRKRPVPQQIQQVQQQSRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINHLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVSNPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagagggggctttcagtcggtacccactggtggcggaggcggcgtaatgggt
cccgggccgccggtacccggcgcggggccaggcatgggcacagggactccttctggaagg
atgggaccgtcgccggccgcgcagaaccacatgtaccgctccccgatgcccgggcctggc
tacccgagaccaggcatgcctccatccagccgcatgaccccgcagggacccgcgatgggc
cccccgggctacggcggcagccccgtgtcccgcccagggatgcccggcgtgatggacccg
tctcgcaagaggcccgtcccgcagcagatccagcaagttcagcagcagagccgcaaccag
catacaaaaaagaagaagatggctgataaaattctacctcagaggatcagggaactggtc
ccggagtctcaggcttacatggatctactggcctttgagaggaagctggaccagaccatc
atgcgcaagaggctggacatccaggaggccctcaagaggcctattaagcaaaagagaaag
cttcgtatcttcatatcgaacaccttcaatccagccaagcccgacgcagaggatggcgag
ggcactgttgcatcatgggagcttcgcgtggaggggcgtctattggaagatacggctgta
tccaaatatgaagccaccaaacagaaaagaaagttctcttccttcttcaagtctctggtg
atagagttggacaaagatctttatggacccgataatcacctggtggaatggcacaggacc
gcaaccacccaggagactgatggcttccaggtaaagaggcccggcgacgtgggtgtccgc
tgcacagtcttgctcatgctcgactaccagcccccgcagttcaagctggaccctcgcctg
gctcgcatgctgggcatccacacccagacccggcctgtcatcatccaggccctgtggcag
tacgtcaagactcacaagctgcaggacccccacgagcgagagttcataaactgtgacaag
tacctgcagcagatcttcgagacccagaggatgaagttctcggagatcccgcagcgcttg
catgcgctgctgatgcctcccgagcccatcatcatcaaccatgtgatcagcgtggacccc
aacgaccaaaagaagacggcgtgctacgacattgacgtggaggtggacgacacgttgaag
acccagatgaactccttcctgctgtccaccgccagtcagcaggaaatagcaggcttggac
aacaagatccacgaaaccatcgagaccatcaaccacctgaagacccagagagagttcatg
ctcagcttcgccagagaccctcagggcttcatcaacgactggctgcagtcgcagtgcaga
gacctcaagaccatgacggatgtggtgagcaaccccgaggaagagagacgggccgagttc
tactaccagccgtgggctcaggaggccgtgtgccgctacttctactccaaggtgcaacag
aggcgacaggaactggagcaggcgctcggaatcaggaacacctaa
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