Phycodurus eques (leafy seadragon): 133409187
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Entry
133409187 CDS
T09682
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133409187 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133409187 (nelfcd)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
133409187 (nelfcd)
BRITE hierarchy
Motif
Pfam:
TH1
AnmK
Motif
Other DBs
NCBI-GeneID:
133409187
NCBI-ProteinID:
XP_061544850
LinkDB
All DBs
Position
10:complement(14635452..14649685)
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AA seq
579 aa
AA seq
DB search
MDEEYYSGAGDWEGPDANTEDAYVDIENLGKIQEDCLKKFSSRDYIMEPAIFNTLKMYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQE
ELGGSAVRRIGQEVQKSAHKRGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSSSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLE
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMIN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaatattatagcggcgcgggggactgggaaggcccggacgctaacacggag
gatgcatatgttgacattgaaaatttggggaaaatccaagaggattgtctgaagaaattt
tccagcagggattacatcatggagcctgccatctttaacaccctcaaaatgtatttccag
gcgggtggttctccagaacacgtcatccagcttctgtcggaaaactactctgccgtagct
cagactgttaatttgctggctgagtggctcatccagatgggtgtcgaaccagcacaagta
caagagcgagttgaaaatcacctgaagagtctgctgataaaacacttcgacccccagaaa
gcagattccattttcaccgtagagggagagactcctgcttggctggagcagatgatcgct
cacacaacttggcgagacctcttctacaagctggccgaggctcatcccgactgtttgatg
ctcaacttcactgtgaagctgatttcagatgcaggttaccagggggagatcaccagtgtg
tcgacagcatgccagcagctggaggttttctctcgagtgttgaggacatctttagccacg
ctgctggatggaggagaggagaacttggagaagaacctgccagaatttgctaaaatggtg
tgtcacggtgagcacacttacctcttcgctcaggctatgatgtcaatcctggcccaggag
gagctgggtggctccgctgtgcgccggattggtcaggaagtgcagaagtcggcacacaag
aggggccacgatgccagtcagataacgctggcgctgggtacagcggcagcctacccccgt
gcctgccaggcgctgggtgccatgttgtccaagggagccctgaatccggccgatatcaca
gtgctgtttaagatgttcagcagcatggacccgcctcctgtggagctgatcagagtgcct
gcttttctggacctcttcatgcagtcgctgttcaagcccggctctaagattaaccaagac
cacaagcacaaatacatccacatcctggcctacgctgccagcgtggttgagacatggaaa
aagaacaagcgagtcaacataaataaggatgaactaaaatcatcctccaaggccatcgag
acggtgcacaacctttgctgcaacgagaacaaaggcgccacagagttggtggctgagctt
ggcactctgtaccagtgcatacggttcccagtggtggccatgggagttttgaagtgggtt
gactggaccgtgtccgagccgcgctactttcagctacagaccgatcacactccggtccac
ttggctctgctggatgagatctgcacgtgtcaccagctgctgcatcctcaggtcctccaa
ttactcatcaagctctttgagacggaacactcgcagctcgacgtcatggagcagttggag
ctcaagaagaccctcctggaccggatggtgcatctgctgagtcgtggttacgtcctgcct
gtggttggctacattcgcaagtgtctggagaagctcaacactgacatctccctcattcgc
tattttgtcacagaggtcctggatgtgattgcacctccgtacacgtccgacttcgttcag
ctcttcttacccatcctggagaatgacagcatcgcaggaacaatccgcacagaaggagaa
catgaccccgtcgcggagttcattgctcattgcaagtcaaatttcatcatgattaattga
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