KEGG   Phycodurus eques (leafy seadragon): 133409241
Entry
133409241         CDS       T09682                                 
Symbol
cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
pee  Phycodurus eques (leafy seadragon)
Pathway
pee03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pee00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    133409241 (cstf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pee03019]
    133409241 (cstf1)
Messenger RNA biogenesis [BR:pee03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     133409241 (cstf1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd CSTF1_dimer WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_EML ANAPC4_WD40 Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 WDR90_beta-prop_4th NBCH_WD40 ASA1 Beta-prop_Aladin PAC11 Beta-prop_SCAP WD40_RFWD3 Beta-prop_VPS8 Beta-prop_DCAF4 CFAP251_N Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Ge1_WD40 DSE1_N PROPPIN Beta-prop_WDR11_1st Beta-prop_SPT8 Frtz
Other DBs
NCBI-GeneID: 133409241
NCBI-ProteinID: XP_061544997
LinkDB
Position
10:97596..111919
AA seq 431 aa
MYRAKPTLKDRQHLYRLIISQLLYDGYTNIANSLINEVKPQSVVSPSEQLVQLAKIGMEN
DDSAVQYAIGRSDTVAPGVGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFLLVGTQHPT
LRLYDVNTFQCFVSCNPLDQHTDTISGVSYNPTANSYVTCSKDGSIKLWDGVSNRCVTTF
DKAHDGAEVCSAIFTKNSKYILSSGKDSVVKLWEISTGRMLVKYTGAGLSGRQMHRTQGV
FNHTEDYVLLPDERTISLCCWDSRTAERKNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRTTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtatcgagccaaaccaacgttgaaagaccggcagcatctgtataggctcataataagc
cagctactttacgatggctacacaaacatcgcgaacagcttaatcaatgaagttaaacct
caaagcgtggtgtcaccatctgaacagctggttcagctggcaaaaattggtatggagaac
gatgacagtgccgtgcagtacgctattgggcgctctgatacagtagcgcccggtgtcgga
attgatctcgaatttgatgctgatgtacagacgatgtctcccgaggcatccgagtatgag
acgtgctacgttacctcgcataagggaccttgtcgcgttgcgacatatagtcgtgatggc
caactaattgccacaggctctgctgatgcttcgataaagatactggacactgagcgtatg
ctggctaaaagtgctatgccgattgaggttatgatgaatgagacggctcagcaaaacatg
gagaatcaccctgtgattcgaaccctgtacgaccacgtcgatgaagtcacctgcctggcc
ttccacccaaccgaacagatccttgcttccggctcaagagattacaccctcaaactcttt
gactactcaaagccctctgcaaaaagagcctttaaatatatacaggaagctgaaatgctg
cgttccatctcgtttcatccatctggagacttccttctggttggaacacagcacccgacc
ctgcgtctttatgatgtcaacacctttcagtgttttgtgtcctgcaaccctctggaccag
cacacagacactattagcggtgtcagttacaatcccacagccaacagctacgtcacctgc
agcaaggacggcagcattaaactgtgggatggtgtctccaatcgctgcgtgaccaccttt
gacaaagctcatgatggagcagaggtctgctcggccatctttacaaagaactccaagtac
atcctctccagtgggaaagattcagtggtcaaactgtgggaaatatcaacaggccgaatg
ttggtgaaatacacaggtgctggtctaagtggccgtcagatgcatcgtacacagggcgtg
tttaaccacacagaggattatgttcttcttcctgatgagcgcaccatcagcctgtgctgc
tgggattcccgtacagcagagaggaaaaacctgctctctctgggtcacaacaacattgtc
cgctgcattgtccactcgcccaccaatcctggtttcatgacttgcagtgatgacttcagg
gctcgtttctggtaccggcgcaccaccaccgattga

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