Phycodurus eques (leafy seadragon): 133409409
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Entry
133409409 CDS
T09682
Symbol
msh6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133409409 (msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pee03400
]
133409409 (msh6)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
133409409 (msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
RhoGAP_pG1_pG2
Motif
Other DBs
NCBI-GeneID:
133409409
NCBI-ProteinID:
XP_061545333
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Position
11:complement(15720017..15731683)
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AA seq
1394 aa
AA seq
DB search
MAKQSSLFNFFSKSPPPVSKPKPRAHPSSVDKSTSSPKEEAKLHSSKATKVKPKIVVKNS
KGGFNKLFSDNASTAKHVSSTCVFSAGSLVWTKLEGHPWWPCMVVPQPLTGQQMRGRGRA
HRIHVHFFDEPSTRGWVSTKYIREYKGSDSSDAKTGGLFFSGNPKIRHAMELADKVLFDS
PQKRLKMPLCTDPSDEEEEVEMQLDKSTVTDDEISDEDQDKNEELKSSEVSPRLTRSKGN
KAKRRRIVVASDSEGSDDEFKPEQATSSSEDEEEGVTVSSEAKEAESPQESEAESPVKPV
KRKRPTEKPAIAKPKIASTPSGAPKRVPPSIAVDTKSRLSVFSAHDSFDSQANGSATVGG
STIWDHEKLEWLQNHRRKDSQRRKVTDEGYDPTTLYVPEDFNNRNTPGMRQWWFIKSRLL
DTVIFYKVGKFYELYHMDAVIGVNELGLTFMKGTWAHSGFPEIGFARFSGVLVQKGYKVA
RVEQTETPEMMEARCKTLVKPTKFDRVVKREVCRIITRGTQTYSVLDGTPAESQSKFLLS
LKEKPEDEGKGGCCRVYGVCFVDTSVGFFHVGQFPDDRHCSRLRTLIAHFAPAEVLFEKG
NPSVETRKILKASLATVLQEGLNSSTQFWDAQKTLKTLSEEDYFRTSAGKDHGTGSSFLP
GILKKMTSGSDLLGLTPKEGYELALSSLGGCIFYLKKCLVDQELLSMANFEEYIPVDVEM
EKSARRKSVFARTRQCMVLDGVTLANLEIFQNGSGGTEGTLLERLDTCSSPFGKRLLKQW
LCAPLCNPRSIRDRLDALEDLMAAQAQVSEVSDLLKKLPDLERLLSKIHSIGTPLKGQDH
PDSRAVLYEEVTYSKRKIADFLSAFEGFQTMQEIVNVFAAVTGNFQSTLLCKVVSLKSDN
GGLFPDLSAELKRWETAFDHQKARATGVISPKKGFDSEYDQALVGIKSCERKLQDYLDRQ
KKRIGCKNMAYWGTGRNRFQMEVPDSISERNIPEEYEVKSTKKGWKRYVTKESEQLFYEL
QGFEEKRDAALKDCMRRLFYNFDKNYSNWKTAVECMAVLDVLLALTRYSQGGDGPMTRPQ
VVLPDGDKQVAPFLELTGSRHPCVTKTFFGDNFIPNDIYIGCPRGSKEDDMQKSHASCVL
VTGPNMGGKSTLMRQCGLVIVLAQLGCFVPAVSLRFTPVDRVFTRLGASDRIMAGKEKKE
EGEKKTTFSALLLIIFSAIGESTFFVELSETACILHHATKHSLVLLDELGRGTATYDGTA
IACAVVKELAEKICCRTLFSTHYHSLVEDFVNNPAVCLGHMACMVENECEDPSQETITFL
YKFISGACPKSYGFNAARLASLPEEVIQSGHRKAREFEKSTISLRLFKKLCQFAEDPRQD
KSHFAALVQMIQSI
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcaaagctcacttttcaatttcttctccaagtctccaccgccggtgtccaag
ccgaagcctcgagctcacccgtcctccgtcgacaagtccacctcgtctccaaaagaagaa
gctaaactacactcgagcaaggccaccaaagtcaaaccaaaaattgtcgttaagaattca
aaaggaggattcaacaaactgttcagtgacaatgcgtcaacagccaaacatgtgagttcc
acatgtgtattcagtgcgggttctcttgtgtggacaaagctggaggggcacccatggtgg
ccatgcatggtggtacctcaacctttgaccggacagcagatgcgaggccggggtcgggcc
caccgcatacatgttcatttctttgatgaaccgtccacacggggatgggtcagcaccaag
tacatcagagagtacaaaggttctgacagtagtgatgctaaaactggagggttgtttttc
agtgggaatcctaaaatccgccatgcaatggagcttgcagacaaagtattgtttgatagc
ccacaaaaacgattaaagatgcctctttgcacagatccctcggatgaggaagaggaggta
gaaatgcagcttgataaatctacagtgactgatgatgagatcagtgatgaggatcaagac
aaaaatgaggagttaaagtcatccgaggtcagtccacgtctaacccggtccaagggaaat
aaagccaagcgccgccgcatagtcgtggcctcagatagcgagggatccgatgatgaattc
aaaccagagcaagccacaagcagcagtgaggacgaagaagaaggagtcacagtgagcagt
gaggccaaagaagcagagagcccacaagagtctgaagcggaaagcccggttaagcctgta
aagcgtaaacgtcccacggagaagcctgcgattgcaaagccaaagatagccagcacccct
tccggtgcaccaaaacgagttccaccatctatagctgttgacacaaagtctcgtttatca
gtcttttcagcccatgacagctttgatagccaagccaatgggtcagccacagttggcgga
tccacaatttgggaccacgagaagctggagtggttacagaatcacaggaggaaagacagt
caaaggcgtaaagtgacggatgagggatatgatcctaccactctgtatgtgccagaagac
ttcaacaacagaaacactcctggtatgcgtcagtggtggtttatcaaatccaggttgttg
gacaccgttattttctacaaagttggaaagttctacgaactctaccacatggatgctgtg
atcggagtcaatgagcttggactgacttttatgaaagggacctgggcacattctggcttt
ccagagattggttttgcacgcttctcaggtgtactagtccagaagggctacaaggtggca
cgtgtggagcagactgaaaccccagagatgatggaagcccgatgtaagactctggtcaag
cccactaagtttgaccgtgttgtgaaaagagaggtgtgcaggatcattacgcggggcacc
caaacctacagcgtgttggacggtactcctgctgagagtcagagcaagtttctgttaagt
ttaaaggaaaaacctgaagatgaaggaaagggtggttgttgccgtgtctatggagtctgc
tttgtagatacttctgtgggcttcttccatgttggtcagtttccagacgaccggcattgt
tcacgtctacgcaccctgattgcacactttgcccctgctgaagtacttttcgaaaagggg
aacccatccgttgaaacacgcaaaatactaaaggcttctctcgctacagtgctacaggag
ggactgaattcaagcactcagttctgggatgctcagaagactctgaaaacgctttcagag
gaagactactttagaacaagtgcaggcaaggaccatgggacagggagtagttttctccct
ggtattcttaaaaaaatgacctctgggagtgatttgcttggtcttacccccaaggagggc
tacgaactggcactctcgtcattgggtggatgtatcttctacttaaagaagtgtcttgta
gaccaggagctactctccatggcgaacttcgaagaatacatccctgtcgatgtggaaatg
gagaaatctgccagacgaaaaagtgtctttgctcggacacgccaatgcatggtcttggat
ggagtgactctggcaaaccttgagatatttcagaatggctctggcggtacagagggaacg
ctgctcgagcgcctcgacacttgctccagcccctttggaaagcggctactcaagcagtgg
ctctgtgctcctctctgtaacccaagatccatcagggacagactggatgcactggaagac
ctgatggctgctcaagcacaagtgtctgaagtttcagacctccttaagaagcttccagat
ttagagcgcctcctgagtaaaattcacagcattggcacaccactgaaggggcaagaccac
ccagacagcagggcggttctctatgaggaggtcacctacagtaagagaaaaatagcagac
tttctttcagcatttgaaggtttccaaacgatgcaggagattgtcaatgtctttgcagca
gttactggtaactttcagtccacattactctgcaaagtggtcagtcttaagagtgacaat
ggtggtctttttcctgacctgtctgctgaactcaagcgctgggagacagccttcgaccac
caaaaagctcgggccactggtgtcattagcccgaagaagggctttgactcagaatatgac
caggctctggtaggcatcaagagttgcgagcgaaagctacaggattatcttgaccgacag
aaaaagagaataggctgcaagaacatggcgtactggggtactgggcgaaatcgctttcag
atggaggtgcccgacagcatctctgagaggaatattccagaagaatatgaggtgaagtcg
acaaaaaaaggctggaagcgttacgtgacgaaggagtctgagcagctgttctacgagtta
caaggatttgaggagaagagagacgctgctctgaaagactgcatgaggaggctcttctac
aactttgacaagaactacagcaactggaagactgcggtggagtgcatggctgtgctcgac
gttctattggccttaacacgatacagccaagggggagatggtccaatgaccaggccacag
gtggttctcccggatggggataagcaagtagcacccttcctcgagctcactggttctcgt
cacccttgtgttaccaagacattctttggcgacaacttcattcctaatgacatctacatc
ggctgcccccgtggcagcaaggaagatgacatgcaaaaaagtcatgcctcctgtgtcctc
gtcacagggcccaatatgggtggaaagtcgactctcatgagacagtgtggacttgtgatt
gtgctcgctcagttgggttgcttcgttcctgccgtgagtctgcgtttcacaccagtcgat
cgagtcttcactcggctgggagcttccgatcgtatcatggctggtaaagaaaaaaaagaa
gagggggaaaaaaaaacaacattttctgcacttcttttaatcatcttctctgctatagga
gagagcaccttctttgttgagttgagcgagactgcatgtattctgcaccatgccaccaaa
cactcacttgtgcttctggatgaattaggaaggggcacggccacatacgatggcacagcc
atcgcctgcgctgttgtgaaggagctcgctgaaaagatctgctgtcgtaccctcttctct
acacactaccactccctggtggaggacttcgtcaacaatcctgcggtgtgcctcggccac
atggcgtgcatggtggagaacgagtgtgaggatccaagccaagagaccattactttcctc
tacaagttcatctctggggcatgtcccaagagctatggcttcaatgctgctcgacttgcc
agcctaccagaagaggtcattcagtcagggcacagaaaggccagagagtttgagaagagc
accatcagccttagactcttcaagaagctctgccagtttgcagaagaccccagacaggac
aagtcccactttgctgcacttgttcagatgatccaaagcatataa
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