Phycodurus eques (leafy seadragon): 133409687
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Entry
133409687 CDS
T09682
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04510
Focal adhesion
pee04512
ECM-receptor interaction
pee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133409687
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133409687
09142 Cell motility
04820 Cytoskeleton in muscle cells
133409687
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pee00535
]
133409687
Proteoglycans [BR:
pee00535
]
Extracellular matrix (ECM) proteoglycans
Others
133409687
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
133409687
NCBI-ProteinID:
XP_061546035
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Position
11:complement(14824594..14840260)
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AA seq
676 aa
AA seq
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MARAPGYRGPLLGLLLHFALLCSAQRVQGPTGPAGVPGIDGIDGDRGSDGPAGPAGPDGE
PGRVGSSGLPGIPGNDGLTGPIGEPGPDGPPGQKGEPGTVGPRGTTGVGSDGPPGPPGPG
GLPGPLVKTGPPGPMGVRGPQGARGPTGPRGAAGMLGNVDLCPNSCPHGTSGHPGLPGMK
GHKGVKGEAGEPGKQGHKGEEGEQGGQGGVGSQGPTGAHGIRGATGIMGTKGEMGARGPD
GDPGPQGVAGASGDQGQRGVMGESGPKGEQGLQGARGMTGLPGPKGDAGLPGVDGREGIP
GMPGAKGGIGTPGFPGEVGPQGLPGLPGSPGSKGQGGPKGDAGQTGFPGTMGSAGKMGER
GEQGEAGSVGPIGEPGELGEQGPVGPVGKPGSRGHKGDPGLTGLPGPPGVPGVKGERGER
GEVGPKGDQGPQGDEGNPGEKGDNGEHGEGGAKGETGNSGEPGRRGPEGTRGQPGIEGPP
GTPGPRGMQGNRGPPGVRGTQGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRRPESGAV
GLPGKPGPSGPRGAPGDNGFPGQAGARGLPGLKGPPGQLGAKGHKGEMGDRGSRGPTVRG
AKGQQGHPGLPGEAGKPGYGQDGRDGQRGPPGLPGQLGVPGPPGSAGPNGYCDPSSCNLS
AGAQRVDVKGPATARN
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggcccccggctatcgagggcctctcctggggctgcttctgcactttgctctg
ctttgctcggctcaaagggtccaaggacccactggacctgcaggtgtaccaggaattgat
ggcattgatggtgatagaggatcagatggcccagctggtcctgctggacctgatggggag
cctggtagagttgggtcttctggattacctggaattcctggaaatgatggtttgaccggc
cctatcggcgagcccggacccgacggtccccccggacagaaaggtgaacccggaacagtt
ggacctcgtggaactactggtgtcgggtcagatggacctcctgggccacctgggcctgga
ggacttccgggcccactggtaaaaacaggaccacctgggccaatgggtgtgagagggcca
caaggagctcgtgggccaacagggccaaggggggcagccgggatgctgggcaacgtcgac
ttgtgtcccaactcttgtccacacgggacctctggacatcccggccttcctggcatgaag
ggacacaaaggtgttaaaggtgaagcaggggaacctggcaaacaagggcacaagggggag
gaaggagaacaaggaggtcaagggggagtcggctcacaaggaccgacgggtgcccacggc
atccgtggagccacaggaataatgggcactaagggagagatgggggctcgaggtcctgat
ggagatccaggtcctcagggtgttgccggtgcatccggtgaccaaggtcagcgaggggtg
atgggtgagtctgggcctaaaggtgaacagggtttacaaggggcaagaggcatgacaggt
ctgccaggtcccaaaggagacgctggtttaccaggtgtggatggccgtgagggtattcca
ggcatgccgggagcaaagggagggattgggacgcctggatttcctggagaagttggccct
cagggacttcctggtttgcctggctcacctggatcaaaaggacagggtggccctaaggga
gatgccggtcaaacaggcttccctggaacgatgggttcagccggaaaaatgggcgaacgc
ggggagcaaggcgaggctggatccgttggacccatcggtgaacccggagaattgggagaa
caaggcccagtgggtccagttggcaagcctggttccaggggacataaaggtgaccccggt
cttactggtcttccgggccctcctggcgttcctggagtaaaaggagaaaggggcgagcga
ggagaagtaggacccaagggagaccagggtccacaaggtgatgagggaaaccctggagag
aaaggagataatggtgaacatggagaaggtggagcaaagggagagactggaaattccggc
gagcctggcagaagaggtccagagggaactcgaggccagcccggaatcgagggtccaccc
ggcacacctgggccacgaggcatgcaggggaacagaggtccacctggagtccgaggaaca
caaggtcctgcgggtaaagagccgagcgaccagcacatcaagcaggtctgcatgcgagtc
atgcaagaacaactggcccagttggctgctagtttgagaagaccagagtccggtgcggtc
ggcttacctggcaaacctggaccttcgggccctcgtggggctcctggagacaatggtttc
ccaggacaggcgggggcaagaggccttcctggactcaaaggaccaccaggacaacttgga
gcaaaaggacacaaaggtgaaatgggtgacagaggttcccgagggcccaccgtgcgggga
gccaaaggtcagcaaggacatccaggactccctggtgaggctggcaaacctggctacggt
caggacggtcgcgatggccagaggggacctcccggtcttcccggacagctcggtgtacct
ggacctcccggttcagccggtcctaatggttactgcgacccatcctcatgcaacctatcg
gcgggcgctcagcgtgtggatgtgaagggacctgcaactgcaaggaactaa
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