Phycodurus eques (leafy seadragon): 133410043
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Entry
133410043 CDS
T09682
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
133410043 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pee03036
]
133410043 (ercc6)
03400 DNA repair and recombination proteins [BR:
pee03400
]
133410043 (ercc6)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
133410043 (ercc6)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
133410043 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
133410043
NCBI-ProteinID:
XP_061546751
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All DBs
Position
11:complement(13162142..13180717)
Genome browser
AA seq
1389 aa
AA seq
DB search
MPVDGLEDQAPSSLSGPASAALTRTGSEENGGSALFSQGPEAASPCTAVNEAGDGNCGGK
RAGALVHIDRQRIQAASASSGAVELLGLGVAVYDQDVLERGVMRQVDEAIREASQGAAKA
EAKKEYEMVLDDVRSVTLSLKHINKIIEQLSPYASSSKDISRKIESVQRQKENKEKQFKK
VQAKQKRLQAILGGEVTQRFEDELLPEDAEDAEPGPSTLGSMLMPAQETEWEALIRTGHM
TPFGTRIPQEEVKKEPRKLMLAENSAFDQYLADQAKLATERKKRTLVKKKRSSGTHGPGS
KGTESSPKDKKMRRRMQKLQITALKAHPKARPKIEPRAPKPKRTPQIEGDEVDSDGSEYL
PSDECFDPDQEERDAIEEGFGEEGDNDEYELKAFKRKNEAKGRRPVKKQKSVDEYSDESS
DEENDAKSKGKKCKDDGDVDCYRQRIRRWKRRRLIEREQRREGGEELTDDSDAEFDEGFK
VPGFLWKKLYKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIICFLAGLSYSKLRTRG
SNYRYVGLGPTIIVCPATVMHQWVKEFHTWWPPFRVSVLHETGSFTSNKEKLIPEIASCH
GILITSYSAVRKLQDTLQRYDWHYIILDEGHKIRNPNAAVTTACKQFRTPHRFILSGSPM
QNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAFKCACVLRDTI
NPYLLRRMKADIKDNLSLPDKNEQVLFCRLTQEQRQVYQSFLDSKEVYQILNGDMQVFSG
LIAMRKMCNHPDLFSGGPRLLRGIREEELTEEEHFGYWKRSGKLIVVESLLRLWLKQGHR
VLLFTQSRQMLDILEVFVRQNHYTYLKMDGTTTIASRQPLIARYNEDKSIFVFLLTTKVG
GLGVNLTGANRVIIYDPDWNPSTDIQAKERAWRIGQKQQVTIYRLLTAGTIEEKIYHRQI
FKQFLTNRVLKDPKQRRFFKSNDIYELFTLADPDEKQGTETSAIFAGTGSDVKAPKKPDR
RHYSKHSKSDQNETYANNRHSLLNISASTCRNLSQGQSNSTTDSPNQQNGMDTDSHLSSS
RQKNDMGLKCRQKRKHCELNDEERHKSKKRKREKDARFEGQRISHLVKKRDYRKVDAEEH
AEEHAEDQRKSDDYVLSKLFKKSGIHSVMQHDSIIESSNPDYVLVEAEANKVAKDALKAL
KVSRQQCRLVLSRGPPPLARKRFGQKKNSLLVGPSVQTLPNSNKCKDAAIVTKSKKPDSG
AHFSGEVAESDSRPAPLSSSTLLAQMRKRNHLSQPSVREEEEDGEQDGAESSHAALSTEH
DELLADLRNFVAFQARVDGQASTQEVLEYFKPRLSVKQAPVFRELLRSICDFQRRSGQEG
LWRLKENFR
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagatggattagaggaccaggccccctcctccctgtctgggccggccagtgct
gctctcactaggacaggttcagaggagaatggaggctcagcacttttttctcagggccct
gaggctgcgtctccctgtacagctgtcaacgaggctggggatggcaattgtggcggtaag
agggccggagctttggtgcacatcgaccgccagcgcatccaagcggcgtcggccagttct
ggggctgtcgagttgctgggtctcggcgtggccgtctatgaccaggatgtcctggagcga
ggcgtcatgcggcaggtagacgaggccatccgggaggccagtcagggtgctgccaaagcc
gaggccaagaaggagtacgagatggtgctggatgacgtcaggtctgtgacgttatctctg
aagcatatcaataagatcattgagcagctatccccttatgcatcatcgagtaaagacatc
agcaggaagattgaatctgtccaaaggcagaaagaaaataaggagaagcaattcaaaaag
gttcaagccaaacagaagcggcttcaggctattttgggaggcgaagttacccaaaggttt
gaagatgagcttttgccagaggatgccgaagacgcagagcctgggccttccacgctgggc
agcatgctcatgccagcccaggagaccgagtgggaggcgctgattcggacaggtcacatg
acaccttttggtacgcgaatcccacaggaggaggtgaagaaggaacctcgcaaactgatg
ctggccgagaactctgcatttgaccagtacctggctgaccaggccaagctggcgaccgaa
aggaagaagaggactcttgtgaagaaaaagaggagctctggtactcatgggccaggatcc
aaaggaactgaatcctctccgaaggataagaaaatgcgtaggcgcatgcaaaagctccag
ataactgctctgaaggctcatcccaaggcgagaccaaagattgagccacgagcaccaaaa
ccaaagagaacacctcaaattgaaggcgacgaggtcgacagcgacggctctgagtacctg
ccgagcgacgaatgctttgatcctgaccaagaggaacgagatgccatagaagaaggcttt
ggggaagaaggtgacaatgatgagtacgagttgaaagcgttcaagaggaagaatgaagca
aagggcaggaggccagtcaagaaacagaagagtgttgatgagtattctgatgaaagttca
gatgaagagaatgacgccaagagtaaaggaaagaaatgcaaagatgacggggatgtggac
tgttacagacagcgaataaggaggtggaagcgacggcgtcttatagaaagggaacagagg
agggaaggaggtgaggagctgacagacgacagcgacgcagagtttgatgaaggcttcaag
gtacccgggttcctctggaagaaactttacaagtaccagcagactggagtgcggtggttg
tgggaactccattgtcagcaggcaggaggcatcctgggagatgagatgggtttgggtaaa
accattcagatcatctgcttcctggctggactgagctacagcaagctgaggacccgggga
tccaactacaggtatgttggtctgggccccaccatcattgtgtgtcctgctacggtcatg
caccagtgggtgaaggagttccacacctggtggccaccttttagagtctctgttcttcat
gaaacgggctccttcaccagcaacaaggaaaagctgattcctgagatagcatcatgtcac
ggcatcctgataacctcatatagtgcagtgaggaaactgcaggacacactgcaacgctac
gactggcactacatcatcctggatgaagggcataagatcagaaatccaaatgctgcagtc
accacagcctgcaaacagtttcgcaccccccacaggttcatcctgtccggctcacccatg
caaaacaatttgaaggagctctggtctctgtttgactttgtctttcctgggaaactgggc
actttacccgttttcatggagcagttctctgttcccatcaccatgggaggatacagcaat
gcttcacctgtccaggtccagacggcgttcaagtgtgcatgcgtgctgagagacaccatc
aatccttacctccttcgaagaatgaaggcagacatcaaggacaacctttccttacctgac
aaaaatgagcaggttctattttgcaggttaacgcaagagcagcggcaggtttatcagagc
ttcttagactccaaagaagtctaccagatactcaacggggacatgcaggttttctccggc
ttaatagcaatgcgtaagatgtgcaaccacccggatcttttctctggcggcccccgactg
ctgagggggatccgcgaggaggaactgaccgaagaggagcactttggctactggaaacgc
tcgggcaagctgatcgtggtggagtctcttctccgcctgtggttgaaacagggccacaga
gtcctgctcttcacgcagtctcgacagatgttggacatcttggaggtttttgtcaggcag
aaccactacacgtacctgaaaatggacggcactaccaccatagcttcccgacagcccctt
atcgcccgctacaacgaggacaaatctatatttgtcttcttgttgacgactaaagtggga
ggtcttggagtcaatttgactggagccaacagggtcatcatctatgacccagactggaac
cccagcactgacattcaggcaaaggagcgggcatggaggattggtcaaaagcagcaagta
accatctacaggctcctcactgcagggaccattgaggagaaaatttaccacaggcaaatt
tttaaacagtttctgaccaaccgtgtcctgaaggaccccaaacaacgccgcttctttaag
tccaatgatatctatgaactcttcactctcgctgaccctgatgaaaagcagggtacagag
accagtgctatatttgcaggtacagggtctgatgtcaaggcacctaaaaaacctgacaga
aggcactatagtaaacactccaaatccgaccagaatgaaacgtatgcaaacaacagacat
tctttattaaacatttctgcatctacttgcagaaacttatctcagggtcaatcaaatagt
accacggattccccaaaccaacaaaatggcatggatacagattcgcatttatcatcctcc
agacaaaaaaacgacatgggcctgaagtgcaggcagaagaggaagcactgtgagctcaat
gatgaagaaaggcacaaaagtaagaagcgtaaacgtgaaaaggacgctcgcttcgagggc
cagcgcatttctcatttggtaaagaaaagagactataggaaggtagatgctgaagagcat
gctgaagagcatgctgaagaccagaggaaatctgacgattacgttttgtcgaagctcttc
aaaaagtctggaatccacagcgtgatgcagcacgactccatcatcgagtcctcaaatcca
gactatgttctggttgaggcagaagccaacaaggtggccaaagatgccctgaaggcactc
aaagtgtcccgtcagcagtgcaggctggtccttagtcgaggcccgccaccgctcgcacgg
aaacgctttggacaaaagaagaattctcttctggtcggaccatctgtgcagacgctcccc
aattccaacaagtgcaaggatgctgctatcgtaacaaaatcaaagaagcctgattcaggg
gctcatttcagcggggaagtagctgaaagtgactctaggccagcccctctatcctcatcc
accctgctggcccagatgagaaagcgcaaccacctcagccagccctccgtgagagaggag
gaagaagacggagaacaggacggggccgagagctcacatgccgctctgagtaccgagcac
gacgagctgctggcggacctgcgcaactttgtggccttccaggcacgagtggacggacag
gccagcacgcaggaagtgctggagtacttcaaacccagactgagcgtgaagcaggcgccc
gtcttcagagaactgctcaggagcatttgtgactttcaaaggaggtctggacaggagggc
ctctggaggctcaaggagaacttccgctga
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