Phycodurus eques (leafy seadragon): 133410299
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Entry
133410299 CDS
T09682
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133410299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pee04121
]
133410299
Enzymes [BR:
pee01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133410299
Ubiquitin system [BR:
pee04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133410299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
PRY
Pur_ac_phosph_N
zf-RING_2
zf-C3HC4_2
zf-RING_5
DUF6377
NDNF
Motif
Other DBs
NCBI-GeneID:
133410299
NCBI-ProteinID:
XP_061547247
LinkDB
All DBs
Position
1:complement(39557536..39600039)
Genome browser
AA seq
689 aa
AA seq
DB search
MDTLESELTCPICLELFADPLLLPCAHSLCFGCAHRILVSHCATNESVQSISAFQCPTCR
YVISLSPERGLKGLKRNVTLQNIIDRIQQASSSAGFPLPLPLPAPQSGPNSPGEEEHERL
ALVPISAAMSSPGTPSEPVQCQFCEQDPPQEAIKTCVTCEVSYCEECLRATHPNKKPFTG
HRLIEPMPGSHLRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRVEK
LRQALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNATHQEGKLLDECDTLIDIIQQRRQ
IIGNKIKEGKAQRLRKLAQQISNCQQCIEGSSVLITQADQTLKESDHACFLQTAKSINER
VSMATASTQVLIPEIHLTDTFDNFALDFSREKKLLENLDYLTAPSAPSIREELCMASYDT
ISVHWTSDDEFTVVSYELQYAIFTGQSNITSLCNSLESWMIVPNIKQNHYTVHGLQSGTK
YIFVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKISHDNLTVERDESTSKKGHS
QDRFTSQSSYGVVGNVYIDSGRHYWEAMIGGSTWYAVGIAYKSAPKHEWIGKNSSSWVLC
RCNNSWVVRHNSKELAIEPSPHLRRIGILLDYDAGYLTFYDAVGSQHLHTFHVSFAQPVC
PVFNVWNKCLTILSGLPIPDHLEGLEPQE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagttgacctgcccaatctgcttggagctctttgcggaccca
ctgctgctcccctgtgctcacagcctatgtttcggctgtgctcaccgcatcctcgtctcg
cactgtgccaccaacgaatcggttcaaagtatctccgccttccagtgtcccacgtgcaga
tatgtcatttccctgagccctgagcgtggactaaaaggactcaagagaaacgtgaccttg
cagaacataatcgacagaattcagcaggcctcatcttcagctggatttccactgccgctg
cccctgcctgccccccaaagcgggcctaactcgccaggtgaggaagagcacgagcggttg
gccctggtccccatcagcgctgccatgtccagcccaggcaccccttcagaacctgtccag
tgccagttctgcgagcaggatccgccacaggaggcaatcaagacgtgtgtgacgtgtgaa
gtgtcgtactgtgaggagtgcctcagggcaactcaccccaacaagaagccatttactgga
catcggctcattgagccaatgccaggctcccatctgcgtgggctccagtgcttggagcac
gaggaggagaaggtcaacatgtactgtgtaactgacgaccagctcatctgctccctctgc
aagctggtgggaaggcacagagaccaccaggtagcagcactgagtgatcgcgttgaaaaa
ctccggcaagccttggattcaaacctgagtaatctgatcaagaggaacaacgagctggag
tcgctcatggggaaactgattcagacttgtcaacatgtggaggtgaatgcaacccaccag
gagggcaagctcttggatgagtgcgacactctgatcgacatcatccagcagaggagacag
ataattggcaacaagattaaggaggggaaggcgcaaaggctacgcaagctggcccagcag
atctccaactgccagcagtgtatcgaggggtcctctgttctaatcacacaagccgaccag
acactgaaagagagcgaccatgcctgctttctgcagaccgcgaagagcatcaatgagagg
gtttccatggcaactgcatcaacccaagtgcttattcctgagatacacctgacagacacg
tttgacaactttgccctggacttctccagagagaagaaattgctggaaaatctcgattac
ctcactgctccttctgctccgagcattagggaagagctgtgcatggcatcctacgacact
atctcagtccactggacatcggatgacgagttcactgtagtgtcgtacgagctccaatat
gccatcttcactggacagtccaacattaccagtctgtgcaattcattagagagctggatg
atcgtgcccaacatcaaacagaaccactacactgtgcacggcctgcagagtggcaccaag
tatatctttgtcgtgaaggcgattaaccaagcggggagtcgaagcagtgaaccgggtact
ctgaagacgaacagccagcccttcaagctggaccccaaatctgctcacaagaagttgaaa
atctcacacgacaacttgacggtggaacgcgatgagagcacatctaaaaaaggccacagc
caagatcggttcaccagccagagcagctacggtgtggtggggaatgtttacattgacagc
gggcggcactactgggaggccatgattggggggagcacatggtacgccgtgggtatagca
tacaagtcagcgcctaagcacgaatggatcggcaagaactcatcctcatgggtgctctgc
cgctgcaacaactcctgggtggtccgccacaacagcaaggagctggccattgagccttcg
ccccatctgcgcagaattggcatcctcttggactacgacgctggctacctgaccttctac
gacgctgtgggctcacagcacctgcacaccttccacgtctccttcgcccaacccgtgtgc
cccgtgttcaacgtgtggaacaagtgtctgacaatcctctcgggcctccccattcctgac
cacctggagggacttgagcctcaagaataa
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