Phycodurus eques (leafy seadragon): 133410489
Help
Entry
133410489 CDS
T09682
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133410489 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133410489 (prpf40a)
Spliceosome [BR:
pee03041
]
Complex A
U1 snRNP components
U1 related factors
133410489 (prpf40a)
Complex B
133410489 (prpf40a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
133410489
NCBI-ProteinID:
XP_061547720
LinkDB
All DBs
Position
12:complement(14304961..14330164)
Genome browser
AA seq
891 aa
AA seq
DB search
MSSSEANNGPNQAAPYPGVPPSGMPPPFMGPPGIPPHFPPMGMPPIGQRPPSMTAMPPGI
MPPGILPSMSAPPMGQMQGMMPPMMGMMLPPRLPAATVQPTGPPGVDTPSGPGTTSTTNG
SPQDEQPKKSLWTEHKSLDGKTYYYNTETKQSTWEKPEDLKSPAEQLLSKCPWKEYKSDT
GKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGTTEVVAPSIAAEPVLQIESTQVSVAP
VAEAEPVEAVPEVQTFQAALQQTAEVKTADAPVVLSESSVPAEALASVEVKKEEPRPEIQ
KKVFKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKLIINDPRYSALPKLSEKKQAFNAY
KVQTEKEEKEEARIKYKESKETFQRFLENHDKMTSTTRYKKAEQMFNDQEVWSCVPERDR
QEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLDNPTFA
EDEELQNMDKEDALICFEEHIRALEKEEEEDKQKTLLRERRRQRKNRESFQKFLDELHDH
GQLHSMSAWMEMYPTLSSDIRFANMLGQPGKIHVDSSTITQHLKRGSTPLDLFKFYVEDL
KARYHDEKRIIKDILKDKSFLVEVNTSFDDFGSVISSDKRATTLDAGNIKLAFNSLLEKA
EAREREREKEEARKMKRKEAAFKTMLKQATPSLEPEDAWEAVRERFLKEAAFEDITLESE
RKRIFKDFMHILEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEEEEYHKKKKRSAS
KTPSERSSSAESERSYKKSKKHKKKGKKRRHKSGSPDSDVADKKGKDAKRDKDNDKDGDK
ARAKSHSDAKHKSPKRKANKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcggaggctaataatggcccgaaccaagcagcaccttacccaggtgtacca
ccctcagggatgcctcccccctttatgggaccaccaggaatcccacctcatttccctccc
atgggaatgcccccgatagggcaacgaccgcccagcatgaccgcaatgccacctggcatt
atgccccccggtatactgccatcaatgtcagcgcctcctatgggacagatgcaaggtatg
atgccacccatgatggggatgatgctgcctcctcgcctgccagctgcgaccgtacagccg
accgggccgcctggtgttgacaccccatctggacctggaaccactagtacgacaaatgga
tctccacaggacgagcagccaaagaaatccctgtggactgaacacaaatcactggatgga
aaaacctattactacaacacggagaccaagcagtccacctgggaaaaaccagaggatctc
aagtctcccgcagaacaattgctgtctaaatgtccttggaaagagtacaagtcagacaca
gggaagccgtactactacaactctcagacaaaggaatccagatggacgaagcccaaagag
ctggaggatctggaagccatgatcaaagctgaggagaatggaacaacagaagtagtagct
ccgagcatcgccgccgagcccgtgctacaaatagaaagcacgcaagtgtccgtggccccc
gttgccgaggcagagccggttgaagcggtccccgaggttcaaacattccaggcggccctg
caacagacagctgaggtcaagactgcagatgcacctgtggttttgtcagagagcagcgtc
cctgcagaggccctggccagtgttgaagtcaagaaggaagaaccacgtccagaaattcag
aagaaagttttcaaatggaacacgaaggaggaggccaagcaggccttcaaggagctcctg
aaggagaagggcgtgtcctccaactcttcatgggaacaggctatgaaattgattatcaat
gacccccgctatagtgctctccccaaactgagcgagaagaagcaggcatttaatgcttac
aaggtccaaacggagaaggaagagaaagaggaggcaagaattaaatataaggagtccaaa
gaaaccttccagaggttcctggagaaccatgacaagatgacatccaccaccagatacaag
aaagcagagcagatgttcaacgaccaggaggtctggagctgtgttccggagagagacaga
caggagatctatgaagatgtcttgttctacctggctaaaaaggagaaggaacaagccaag
cagctgagaaagaggaattgggaagccttgaagaacattctggacaacatggccaacgtc
acgtaccgcaccacctggtccgaagcccagcagtacctgctcgacaatcccacatttgct
gaggatgaggagctgcagaacatggacaaagaggacgcgctcatttgctttgaggagcac
atccgtgccctggagaaggaggaagaggaggacaagcagaagacgctccttcgggagagg
aggcgacagcgcaagaacagagagtccttccagaaatttctagatgagctccatgaccac
ggccagctgcattccatgtcggcctggatggagatgtaccccaccttgagctctgacatc
cgttttgccaacatgctgggccagcctggtaagatccacgtggatagcagcaccataacc
caacatcttaagcggggctccactcctctggaccttttcaaattctacgtggaagacctg
aaggcgcgttaccacgatgagaagaggattatcaaagacatcctgaaggacaagagcttc
ctggttgaagtcaataccagctttgatgattttggatcggtcatcagctcagacaaaaga
gccaccacactcgatgcaggaaacatcaagttggccttcaacagcctgctggagaaagct
gaagcgagggagcgtgagcgtgagaaagaggaggcgaggaagatgaagagaaaagaggcg
gcctttaagaccatgctgaagcaggccacgccgtccctggagccagaggacgcgtgggag
gccgtgagggaacggttcctaaaggaagcggcctttgaagacatcacgctggagtcggaa
aggaagcggatcttcaaagacttcatgcacatcttggagcacgagtgccagcatcaccac
tccaagaccaagaagcactccaagaagtccaagaagcaccacaggaagcggtctcgctcc
cgatcgggctccgagtctgaagaagaggaataccacaagaagaagaagcgctctgcatcc
aaaaccccgtcggagcgctcctccagtgccgagtcagagagaagctacaaaaagtccaag
aagcacaagaagaagggcaagaagagacgacacaagtctggctcgcccgactcggatgtc
gccgacaagaagggaaaagacgccaagagggacaaagacaacgacaaagacggcgacaag
gcccgagccaagtctcactcggacgccaaacacaagtcccccaaacgcaaagccaacaaa
gaggagggtggctgggacacgtcaggaagtgaactgagcgaaggtgaactggagaaaaga
agaagaactttactggagcagctggatgcaccttga
DBGET
integrated database retrieval system
