Phycodurus eques (leafy seadragon): 133410534
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Entry
133410534 CDS
T09682
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04382
Cornified envelope formation
pee04510
Focal adhesion
pee04512
ECM-receptor interaction
pee04514
Cell adhesion molecule (CAM) interaction
pee04518
Integrin signaling
pee04810
Regulation of actin cytoskeleton
pee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133410534 (itga6a)
04514 Cell adhesion molecule (CAM) interaction
133410534 (itga6a)
04518 Integrin signaling
133410534 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133410534 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133410534 (itga6a)
04810 Regulation of actin cytoskeleton
133410534 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133410534 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pee04147
]
133410534 (itga6a)
04515 Cell adhesion molecules [BR:
pee04515
]
133410534 (itga6a)
04090 CD molecules [BR:
pee04090
]
133410534 (itga6a)
Exosome [BR:
pee04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133410534 (itga6a)
Exosomal proteins of breast milk
133410534 (itga6a)
Cell adhesion molecules [BR:
pee04515
]
Integrins
Integrin alpha subunits
133410534 (itga6a)
CD molecules [BR:
pee04090
]
Proteins
133410534 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
ECSCR
Motif
Other DBs
NCBI-GeneID:
133410534
NCBI-ProteinID:
XP_061547839
LinkDB
All DBs
Position
12:16472697..16496779
Genome browser
AA seq
1082 aa
AA seq
DB search
MLQRGGFCAALLYLFNATLLLAFNLDTNYVIRKDGEPGSLFGFSLAMHRQLNPDKRMLLI
GAPRAGALGKQNAKITGGLYKCDINYSPDCERILFDSEEDIRVENKENQWMGVTVQSQGP
GGKILTCAHRYQRRLFVNTPQEARDITGRCYVLSQDLTIDESSDDDGGNWNFCEGRARGH
EMFGSCQQGLAATFTKDYHYLVFGAPGAYNWKGIVRVEQKNNTLLEMGVYDDGPYEVGDE
HILNPELVPVPANSYLGFSLDSGHSIARRRGLTVVAGAPRANHSGAVLLLRKENQGSARL
AVEHTLYGPGLASSFGYDVAVADLNGDGWQDIVVGAPQFYMKDKDVGGAVYVYINQGGRW
RGVAPVRLNGTRDSMFGLAVENIGDINQDSYGDIAIGAPYDDGGAGKVYIYHGSAQGINT
RPAQIIKGKDYNIRLFGYSLAGNMDLDSNSYPDLAVGSLSDSALIYRARPVISIRQAIKI
SPREIDLTIKNCGNNICFTVDACFNYKANPASYNPRITISYSVEADGDRRKQGLLSRVVF
LNKSNSETEHQFNGTVDLRGQKQETCIKIEAKLKDNIKDKMRSIPVEVSAQIVGTKRQKA
KNGLPLLMPILDSSQSSKETVEVNFVKEGCGSDHVCRSNLMMDYKLLYKQSNQDIYSPLP
IRNNVPVFHVTYERKDLALRLTVSNAKADDAYEAKLSGSFPDTLSYSGVRSHRATMDKQI
ICVANQNGSQADCELGNPFQQGSEVTFDIILSTVAMTLEATEIDIDLQLHTTSVQDLARV
RVKAKVVIELPLSVTGEANPHRISFGGVVRGESAMESEDEIGGLVNYTFRINNLWASSVK
SSLHIQWPKSNKNGKWLLYLVKMKAKEGPRDIICTPESEINPLKHIQESSAFRTKREIVQ
KKTRGKTSSVSVKNKILACGKELQCAVLKCPLRGLDGATVELRARLWNSTFLEDYTSLSS
LDIIVRASLVLHTRATNTILRTPDTEVTLTVFPESAVAQYGGVPWWIIVVAVLAGILILA
LLVFLLWKCGFFKRSKQEDAVPQYHAVRIRKDSPDYEDGKVKLDPFEKKQWMTTWVDNES
YS
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcgagggggattttgtgcggcacttttataccttttcaacgcaactctattg
ctggccttcaacctggacaccaactatgtgatcaggaaagacggagaacccggcagtctg
ttcggattctctctggccatgcaccggcagctcaacccggacaaacgaatgttgttgatt
ggtgccccccgagccggagctctggggaaacaaaatgccaaaatcactggaggactttat
aaatgtgacatcaactactctcctgattgtgagcgcattttatttgacagtgaagaggat
atccgagttgagaacaaggagaaccagtggatgggggtgacggtacagagtcaaggacca
gggggaaagattctgacgtgcgctcatcgctaccagaggcgcttgtttgtcaacacgcca
caggaggcccgtgacatcacaggccgctgctacgtcctgagccaagacctgaccatcgac
gagtcgtccgacgacgacggcggcaactggaacttctgcgagggcagggccagaggtcat
gagatgttcgggtcgtgtcagcagggtctggccgccaccttcaccaaggactaccattac
ctggtctttggagcgcccggcgcgtacaactggaaaggcatcgtacgcgtggagcaaaaa
aacaacaccctgctggagatgggcgtgtatgacgacggcccttacgaagttggcgatgag
cacatcttgaaccctgagcttgtacccgtccctgccaacagctacctcggattctcctta
gactcgggtcacagcatcgccaggaggcggggcctaactgtggtggctggagcacccaga
gccaatcacagcggagctgtgctgctgctgaggaaagagaaccaaggctcggcccgactt
gctgtggaacacacgctgtacggacccgggctggcatcctcgtttggatacgacgtggcc
gtagccgacctgaatggggatggatggcaggacatagtagtgggagcgccccagttctac
atgaaggacaaagacgttggaggggctgtttacgtttacatcaaccaggggggacgatgg
cgaggcgtcgctcctgtccgtctcaacgggaccagggactccatgtttggcctggcagtg
gagaacatcggcgacatcaatcaagactcttatggagacatcgccatcggagcgccttat
gatgatggcggtgctggaaaggtctacatttatcacggctctgcacagggaataaacacc
cgcccggctcagattattaaaggaaaagattacaacatccgactgtttggctattctctg
gcagggaacatggacttggacagcaactcttatccagaccttgccgtgggctcgctgtca
gactcggcactcatttacagggcaagaccagtcattagtatccgccaagccatcaaaatc
tccccaagggaaattgacctgacaataaagaattgtggaaacaacatctgcttcactgtg
gacgcttgcttcaactacaaagcaaaccctgcatcttataacccaagaataactatcagc
tattctgtggaggcggacggagatcgcaggaaacaagggttgctctccagagtcgtgttc
ttgaacaaatccaactcggaaacagaacaccagtttaacggtaccgtggacctccgagga
caaaagcaggaaacgtgcattaagatagaagccaagttaaaggacaacattaaagataag
atgcgcagcattcccgtggaggtgtctgcacaaatagtcggtacgaagcgacaaaaggca
aagaacggcctcccgctgctgatgcccatcttagactcttctcagtcaagcaaagaaact
gttgaggtcaattttgtgaaggaaggctgcggaagtgatcatgtttgtcgcagtaacctg
atgatggactacaaattgttgtacaagcaaagcaatcaagacatttactcgcccttgccc
atcaggaacaacgtgcccgtgtttcatgtgacttacgagaggaaggacttggctctgcga
ctgaccgtcagcaacgcgaaggccgacgacgcctacgaggccaagctgtcgggctcgttc
cccgacacgctctcatactcgggcgtgcgctcgcatcgcgccacgatggacaagcagatc
atttgcgtggccaatcaaaacggctctcaggccgactgcgagctcggcaacccgtttcag
cagggctccgaggttacatttgacatcatcctgagcactgtggcgatgactctggaggcc
acggagattgacattgatctgcagctccacacaaccagcgtacaagatctggcccgtgtg
agagtcaaagccaaagtggtgattgagttgccattgtcggttactggggaagccaaccct
catcgtatttcattcggaggagtcgtgagaggagaaagcgccatggaaagcgaagacgag
atcggcggtttggtcaattacacattcagaattaacaatttgtgggcctcttctgtcaaa
tcctcactacacatccagtggcccaagtccaacaaaaatggtaaatggcttttgtacctg
gtgaagatgaaggctaaagaaggaccgcgcgacatcatttgtacaccagagtctgagatc
aaccctctcaaacacatccaggagagttccgcattcaggacaaagcgggaaattgtacag
aaaaagacaagaggcaagacttcttcagtctcagtcaaaaataagattttggcgtgtggg
aaagaactgcagtgtgcggtgctgaagtgccccctgcgtggactcgatggggccacagtg
gaactcagagcgcgactgtggaactcaacctttctggaggattacacttctctttcgtcc
ttggacattattgtgagggcttcactggtgctccacacccgggccacaaacacgatcctg
agaacccctgacaccgaagtgacccttacagtgttcccagagagtgcagtggcccagtat
ggtggcgtcccctggtggatcatcgtggtggctgttcttgcagggatcttgattttggct
ttgttggtctttctgctgtggaagtgcggcttcttcaaacgctccaagcaagaggacgcg
gtccctcagtatcacgccgtacggattcgaaaggattctcctgactatgaagacggcaaa
gtcaaactggatccttttgagaagaagcagtggatgacaacatgggttgacaatgaaagt
tactcataa
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