Phycodurus eques (leafy seadragon): 133410571
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Entry
133410571 CDS
T09682
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133410571 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133410571 (bard1)
04121 Ubiquitin system [BR:
pee04121
]
133410571 (bard1)
03036 Chromosome and associated proteins [BR:
pee03036
]
133410571 (bard1)
03400 DNA repair and recombination proteins [BR:
pee03400
]
133410571 (bard1)
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
133410571 (bard1)
Ubiquitin system [BR:
pee04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133410571 (bard1)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
133410571 (bard1)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
133410571 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
zf-RING_6
Ank_2
Ank_4
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
zf-RING_10
Ank_KRIT1
zf-C3HC4_3
PTCB-BRCT
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
133410571
NCBI-ProteinID:
XP_061547901
LinkDB
All DBs
Position
12:complement(18615944..18635548)
Genome browser
AA seq
784 aa
AA seq
DB search
MDTCAGAQTKDWKNTKEAVANFRRLLLCSKCSQLLKDPVCLGTCEHMLCRSCAGPQAGDG
CVVCQSPSWVKDIQINRQLSSIIQLFCGLESVLNPDGLPDSSEVIRAQNEGPILKHKKNF
KIWFSPRSRKVRCVVEKAPKVCRPETKSLEKAAETQPDAPTAKVTDLMVFNFTSSSQDSG
SSSPTSSNNNQNRKRRTNVKKIGSRKKTMKRATKKQRRQMVKKKLDAVNKQWRITEVEST
SVESEHLAAEVESRSKKKVSFLSPDVLSDIQDLGSVSGNCSEGSIAAPMNPALLCQNESD
GFHHDTLPTSDSIPKRNAKKQATLSSPQHSSKHPRLDGEAVTLETTPKRPTASPSCCRRS
LGHSSPAALNSLSLPSLRCKKTTHEDGGESPSVPIIVGRKSTSPRASLGRCNSRNPAVVK
KNRKGETSLHLAAIKGDVKDVKKLLDQGADPNLKDNAGWTPLHEACNLGHLLVVEALLSR
GALLNTPGYENDSPLHDAVRNGHIAVVKLLLQFGASQSVLNLHGKRPADYAVSQEMLEVF
QEVPEEAQNANTSITSPASLSLVGNCAKQEEIVLFLSSKLSQTDQHQFAKLSRLLGGRIT
DSFTYSVSHIVVPEGPLLSTYSTLLGLLAGCWIVKYSWVEACLQAGKWMPENEHEAGEGP
QRSRINRCSLLPPLFDGCFFFLLGSFKSPPKDKLAKLLCDGGGQLLSRQPKPDSDVTQTL
SAAAYHALPGSDQALCTQYIIFDHQGPHKPAVVRRGKVWSAPSTWIIDCIVAFRLLPVPN
LQSV
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtgtgctggggcgcaaacaaaggactggaagaatacgaaagaggcggttgcc
aactttcgacgactgctactttgttcaaaatgctcgcagttactgaaggatccagtttgt
ctcggaacatgtgagcatatgctgtgcaggtcgtgtgcaggccctcaggcaggtgatggc
tgtgtggtttgtcagagcccttcctgggtgaaagacatccaaatcaacaggcagctcagc
agtatcatacagcttttctgtggcttggaatctgtgttgaatcctgatggactgccagac
tcctctgaagtaatacgggcgcaaaatgagggccccatcttaaaacacaagaagaacttc
aagatctggttcagccctcgcagccgtaaagtgcgttgcgtggtggaaaaagctccaaaa
gtctgcagacctgaaaccaagtcattggaaaaagcagctgaaacacagcctgatgctcca
acggctaaagtcactgacttgatggttttcaacttcacatcatcctctcaagactctggc
tcctcttctccaacatccagcaataacaaccaaaacaggaagagaagaacaaatgtgaag
aagattggcagcagaaagaaaacaatgaaaagagcaacaaagaaacaacggagacaaatg
gtgaagaagaagcttgatgctgtaaacaagcaatggaggattacagaggtggaaagtacc
tcagtggaatcggaacaccttgctgcagaagttgaaagcaggtctaaaaaaaaggtttcc
ttcctcagccctgatgtgttatctgacattcaggatctcggctctgtgtcaggcaattgc
tcagaaggtagcatcgctgcacccatgaacccagcactgctttgtcagaatgagtcagac
ggttttcatcatgacacactgcccacctctgactctatcccaaaaaggaacgctaaaaaa
caggccaccttatcttctccacagcattcctcaaaacacccaagactggatggagaggcc
gttaccctggagaccacaccgaaaaggccaacagcctcaccgagctgctgtcgaaggtca
ttgggtcactcgtctcctgctgcccttaattctttgtctttgcccagcttaaggtgtaaa
aagaccacccatgaagatggaggagagagtccctccgttccaattattgtaggtcgaaaa
tctacctctcctcgtgcttctctgggacgctgtaactcgaggaacccagcagttgtgaag
aagaaccgcaaaggagagacctcgctgcatttggctgctataaagggggatgtaaaggat
gtcaagaaactactggaccagggagctgaccccaacctgaaggataatgcaggatggaca
cctttgcacgaagcatgtaacctgggtcatctgttagtagtggaggcgctattatcaaga
ggggccctgttgaacactcctggctatgaaaatgactctccacttcatgatgctgtacga
aacgggcacatagccgtcgtcaaattgctgcttcagtttggagcctcacagagtgtgctt
aatcttcatggcaagcggcctgcagactacgctgtaagtcaggagatgctggaggtcttc
caggaagtgcctgaggaagcccaaaatgcaaatacatctatcaccagcccggccagtctc
tctctagtgggtaattgtgcgaagcaagaagaaatcgttttgtttctgtcgagcaagctg
tcacaaacagaccagcatcagtttgccaagctgagcaggcttttggggggaaggataaca
gactcctttacttattcagtgagccatattgtggtgccagaaggacccttgctgagcact
tactcaacccttcttggacttcttgcaggctgctggattgtcaaatacagctgggtggag
gcatgtctgcaggcaggcaagtggatgccagaaaacgagcacgaagcaggagaaggcccc
cagcgcagtcgcatcaaccgctgcagcttgctcccaccactcttcgacggctgtttcttc
ttcctgttgggctcctttaagtcgcctccaaaagataaactggccaaactactctgcgat
ggaggaggtcaactcttgagtcggcaacccaaacccgacagtgatgtgactcaaaccctc
agtgctgctgcctaccacgctttgccgggatcagaccaggccctctgcacccaatacatc
atctttgaccaccagggtcctcacaagcctgctgtggttcggaggggcaaagtgtggtct
gctccctccacctggatcatcgactgtatagtagctttccgactcctccctgtaccaaac
cttcagtccgtataa
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