Phycodurus eques (leafy seadragon): 133411612
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Entry
133411612 CDS
T09682
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133411612 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pee01009
]
133411612 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pee04131
]
133411612 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
pee03029
]
133411612 (rb1cc1)
Protein phosphatases and associated proteins [BR:
pee01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133411612 (rb1cc1)
Membrane trafficking [BR:
pee04131
]
Autophagy
Autophagosome formation proteins
ULK complex
133411612 (rb1cc1)
Mitochondrial biogenesis [BR:
pee03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133411612 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
133411612
NCBI-ProteinID:
XP_061550163
LinkDB
All DBs
Position
13:complement(22280162..22294441)
Genome browser
AA seq
1575 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQILVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMYEVANKLSSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLLKFDTAYSTYQH
DLEEIKFKLTKLGTAVSVMARIPLLECLTRQSHREQMKKSASTTEKDSDETEEEKSTDSV
LCAPASQQGHKVPGSAETSKCEGAGERDTCQMAHSGGLRAALLDEDIPTLGHVPQFNVTL
LDWINVQDRPNDVESVVRKCFESINRLDPRIIQPFLADCRDTIAKLDNQNMKAIKGLEDR
LYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLNNHR
KLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELVERVRVVEA
LSTVPQMYCLAVVEVVRRKMFVRHYREWAYALVKDGKQLYEAEKFKRETFGKLFRKSFLR
NRLFRGLDAWPPTSFCTRKPRRFDDELPDISLDDLQYLKSCCPAEVQPFLMVPTMCDFEP
LNRHVEKLHQLVQAAQSLDEMSQTITNLLSEQRVSCSQSSHRSNVLTPRSAETPPGLAAT
SKAPASLSLQGASSRPLHVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQPGSLDLDSL
AESPESDFMSAVNVFVIEDNLTSPNPISDPTSPEMMVESLYSSVINAIDNKRMQDTTTLE
REKTRIAVLHQAMDNYRLAAEESHSNLRCLKDDLCRLRSQVLKEQNDFGFSLRSVSTEVR
DMVDNICQALELELKEQHQSELVAVQQAYEKQVRVLTEDNQVNQSIVRDVQRAMLELEGL
MERKEKELTHLEGDKVLWLEMESSLREKIKKSEELMSDRAAEHEKLLACRDSLKSQLENL
HFEIERGQQKIRQELEAEAQLQLKELEDRMKVEHTAEVGNLKGDHQEALEHIAVDNMAKL
KEIREHHNTALKEKDLQIKDLEVRFADLAELRCKVEMELALKETELDEARVLLEETKMQQ
AEAVSSQVAAETQVLKEELAKTKEELQVKNEEYEMDRAELKSLLKIEKDHCISELVDRHE
KEMALLQSELSSLQQQAQDDDRSQAEQLQSLKRELDQQVSSLNEEKELQLRNFQELEQEL
RTMSSNLQAENKLLSKRLEEEGSDEALKMLQLKNKEMENRLSDRIRQLENELRERPLSGE
TALPVCTESPTDTPLSLDSASLQTQLELLERRKNEEIQNLKTSLIAEQQTNFNTVVTRER
LKKEQIISELTEKLQNVTQQQEKDKALIETLSEDRASVMQEKKHLEEELNRLRSTTPVSS
AIFTTHSSAHEVTGACSSELLADTDRLTSVATLTDDEHVDSAVEASMVTVHDNIFMSEEK
QRILLLERTLHMKEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHD
NYVLFTVGPTLYFLHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLG
TKFYRVKAVPWNRRV
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggttaacaatggcagcacactgacatttgacaccgatctc
gctgtccaaactgtcctggagcttaaacatgccatccaggctaaatataagattgcaatt
caacatcaaatccttgttgtcaatggaggggaatgtatggctgcggagaggcgtgtctgc
agctacagtgcgggcactgaaacaaaccccatattcctgttcaacaaggagatgatcttg
tctgaccgggatccaacaatccccaaaaccaccttctccattgagagtgagattcaggtg
aaggtggaagagtcgctactgatgccagccgtctttcacaccgttgcctctcgaacacaa
cttgctctggaaatgtatgaagttgccaataagcttagttcgttctgtgaacgcttggtt
catgatgaacacctccagcaccaaggatgggccgccatcatggccaacctggacgactgc
acgctgtcttatcagaagctactgttaaaatttgacactgcgtactcgacatatcagcac
gacctggaggaaattaagtttaaactcacaaaacttgggacagcagtctctgtgatggcc
aggatccctctgctggaatgtttgacgagacaaagtcacagagagcagatgaagaaatcc
gcctccacaacggagaaagattccgacgagacggaagaagaaaaatccaccgactctgtg
ctatgtgcccccgcttcacagcagggccacaaagtaccaggttctgcagagacgtccaag
tgcgaaggtgctggtgaacgggacacgtgtcaaatggcgcacagcggagggcttagggcc
gcgctgctggatgaagacatccccacgctcggccatgtgccccaattcaatgtcacgctc
ttggactggatcaatgtgcaggatcgacctaatgatgtagagtctgttgtaaggaaatgc
tttgagtccatcaacaggcttgacccacggatcattcaacccttcctggcagactgtcgc
gacaccatcgccaagctggataatcaaaacatgaaagccatcaaggggctggaggaccgg
ctgtacgctctcgaccagatgatcgcaagctgcaagaagttggtcaatgaacaaaaagaa
cttgctcagggatttttagccaatcagaagcgggctgaaaacctgaaggacacatctgtt
ctgcccgacctgtgtctgagtcacaccaaccagctgatgatcatgttgaacaaccacagg
aagctgctggacatcaaaaagaagtgcaccactgccaaacaggagcttgcaaacaaccta
caagtccgactcaaatggtgctgctatgtgatgctccatgcagaccaggatggtgagaag
cttcaagctctcctccgactcctcaccgagctcgtggaaagggtgcgtgtggtggaagcc
ctcagtacagtcccccagatgtactgcttggcggtggtggaagtcgtccgtaggaaaatg
ttcgtacgacactatagagagtgggcttatgcacttgtgaaagatggcaaacaactgtac
gaggcggagaagttcaaaagggagacgttcgggaaactcttcagaaagtccttcctccga
aatcgcttgtttcgagggcttgatgcgtggcctccgacatcattttgtacacggaaacct
cgaagatttgatgatgaacttccagacatctcccttgatgacttgcaatacttgaagtcg
tgttgtcctgcggaggtgcagcctttcctcatggtgccgacgatgtgtgactttgagccc
ttgaatcggcacgtggagaagctccatcagctggtccaagctgcacagagtttggacgag
atgtctcaaactatcactaacctgctgagtgaacaaagggtatcatgtagccagagctcg
cacaggtcaaacgtgttgacgccgaggtctgcagagaccccacctgggctggccgcaacc
tccaaagctcccgcctctctcagccttcaaggagccagctctcgtccgctacacgttccc
gcccctttagaagacctttctccggacagcattgacgcgcagacgtttgactttgaaacc
atcggccatcccaacatggatcccgtcctgcaacctggctccctggacctggattccctg
gcggagagcccagagtccgacttcatgtccgccgtcaatgtatttgtgatagaggataac
ctaacctccccgaaccccatcagtgacccgaccagccccgaaatgatggtggaatctttg
tactcgtccgtcatcaacgccatcgacaacaagcgcatgcaggacaccacaacgctggag
agggagaagaccagaattgccgtgctccatcaagcgatggacaactatcgattggctgcg
gaggagtcccactccaacttgaggtgtttaaaggacgacttgtgtcgcttgcgaagtcag
gtcttgaaagaacaaaacgactttggcttttccctgaggagtgtaagcacagaggttcgc
gacatggtggacaacatctgccaggcgcttgaactggagcttaaagagcagcaccagagc
gagctagtcgctgttcagcaagcgtatgagaagcaggttcgcgtgctaacagaggacaac
caagtcaaccagagcatcgtgcgagatgtgcagcgagccatgctggagcttgaggggctg
atggagcgcaaagaaaaagaactcacccacctggagggtgacaaggtgctttggctcgaa
atggagagcagcctgagagagaagatcaagaagtcggaggagctgatgagcgatcgagct
gcggagcacgagaagctcttggcttgcagagactctctgaaaagtcagctggagaatttg
catttcgagatcgaacgtggccagcagaagatcaggcaggagctggaggctgaggcgcag
ttgcagttgaaggagcttgaggatagaatgaaggtggaacatacagcagaagtgggtaac
ctcaaaggggatcatcaggaggctttggaacacattgctgttgacaacatggctaagcta
aaggagataagagaacaccataacactgctctgaaagagaaagaccttcaaataaaagac
ctggaggttcgctttgccgatcttgcagaactgcgttgcaaagtggagatggagttggct
ctcaaagaaacagaattagatgaggcgagggtcctcctggaggagacaaagatgcagcag
gccgaggcagtgagctcccaggtagcagcggagacgcaagtactcaaagaagagcttgca
aagaccaaagaagagttacaggtgaaaaatgaggagtacgagatggacagagccgagctg
aagagcctcttgaagattgagaaggaccactgcatatcggagctggtggacagacatgag
aaggagatggcgcttttgcaaagcgagctatcctccctgcagcagcaggcccaggatgat
gacaggagccaagccgagcagctacagagcctcaaacgagagttggaccagcaggtgtct
tctctaaatgaagaaaaggagctgcagttgaggaattttcaagaactggagcaagagttg
aggactatgagcagtaatctgcaggcagaaaacaaacttttaagtaaaagactagaggag
gaaggctcagatgaggctttgaagatgttgcagctgaaaaataaggagatggaaaacaga
ctatctgacaggattcgacaacttgaaaatgagcttcgagaaaggccgttatcgggtgag
acagcgctaccagtgtgcaccgagagccccacagatacacctctctctctggactcggct
tccctgcagacacagctggagctcctggagaggaggaagaatgaggagatccagaacctc
aagacctccttgatagcagaacaacagacaaacttcaacactgttgtgacgcgtgaaagg
ctgaagaaggagcagatcatcagtgagctcacagagaagctgcagaatgtcactcaacag
caggaaaaggacaaagctttgatagagactctctctgaggaccgagccagcgtgatgcag
gagaagaagcacctggaagaggagctgaaccgcctgcgtagcaccactccagtttcctcg
gccatcttcaccacccactcgtcggcgcacgaggtcaccggagcgtgttcctccgagctc
ctggccgataccgacagactgacctctgtggccaccttgacggacgatgagcatgtcgac
tctgcagtggaggccagcatggtgacagtccatgataacatcttcatgtcagaggaaaag
cagaggatactcttacttgagaggacgttacacatgaaggaggaagagaacaagcgcctc
agtcaaagactgatgtctcaaagcatgtcttcagtgtcctcgcggcattctgacaaaatc
gccattagagattttcaggtaggcgatttggttctcatcatcctggatgaaagacacgac
aactacgtgctgttcaccgttggccccacgctctacttcctgcactctgagtcgctcact
gcgctcgacctcaaaccggcctcggggacgtcaaggcggccgtgggtgctcggaaaagtg
atggagaaggagtattgccaggctaaaaaggcccagaacagattcaaggttcctctagga
accaaattctacagagtcaaagctgttccgtggaacagaagagtttaa
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integrated database retrieval system
