Phycodurus eques (leafy seadragon): 133411710
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Entry
133411710 CDS
T09682
Symbol
cop1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase COP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04115
p53 signaling pathway
pee04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133411710 (cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
133411710 (cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pee04121
]
133411710 (cop1)
Enzymes [BR:
pee01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133411710 (cop1)
Ubiquitin system [BR:
pee04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133411710 (cop1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133411710 (cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
zf-C3HC4_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
zf-C3HC4
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
zf-RING_2
Beta-prop_EML
Beta-prop_DCAF4
zf-RING_UBOX
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_Vps41
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
zf-rbx1
zf-RING_10
WDR90_beta-prop_4th
UvrD-helicase
Sina_RING
zf_C2H2_10
Motif
Other DBs
NCBI-GeneID:
133411710
NCBI-ProteinID:
XP_061550354
LinkDB
All DBs
Position
13:complement(858661..911287)
Genome browser
AA seq
716 aa
AA seq
DB search
MMSNKRSPQIAGGASSVPSTSSSTSSSSATGGAAVNPSGGSNGVTSNGNNSGTVVPSRTL
AVAGDSGLSVPNLVAVSSSRGGFASLSRPAASSGSXRKRSLHQAPLYNGLLNSYEDKSND
FVCPICFEMIEEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELI
LKQKQRSEEKRLKLDHPNGSRWHVLQDVLSPDQENLDLANVNLMLELLVQKKKQLEAESQ
AAQRQILMEFLNEARRNKREQLEQLQKELNFLEEDIKRVEEMSGLYSPMEPECTVPNVEA
HSPSPSCSSIIEPANYNQPPEFGGTAQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNK
MSRISDEGRNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDY
FAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTV
ILWDGFTGHRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAK
ANVCCVKFSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVS
ASTDSQLKLWNVNKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTL
LTFKFDTVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaaacaagcggtccccgcaaatcgctggcggtgcgagctctgtgcccagcaca
agtagcagcactagtagcagcagtgctacaggaggcgcagcggtcaaccccagcggtgga
agcaacggcgtcacgagcaatggcaacaactctggaactgttgtgccctcccggacactg
gcagtcgcaggtgacagcggcttgtcggtgcctaatttggtggccgtgtcgtcgtcccga
ggtgggttcgcctctctgagtagaccggccgcatcctccggcagcnncaggaagaggtcc
ctccaccaagcacctctttacaatggcctgttgaactcgtatgaagataaaagcaacgat
tttgtctgccccatttgcttcgaaatgatagaagaggcacacatgaccaagtgtgggcac
agtttttgcttcaaatgcatccgtcagagtctggaggatagcaacaggtgtcccaagtgc
aactacattgttgacaatgtggatcaactttacccaaacttccttgtcaatgaactgatc
cttaaacagaagcaaagatcagaggagaagagactcaaattagatcatcctaatggatcc
agatggcatgttttacaggatgtgttaagtcctgaccaagagaacttggacctggcaaat
gtaaatctaatgttggagctactggttcagaagaagaagcagctggaggcggaatcccaa
gcagctcagagacagatcctcatggagtttcttaatgaagcaaggagaaacaagagagag
caactggagcaactacagaaggagcttaacttccttgaagaggacattaagcgtgttgag
gaaatgagcgggctgtactctccaatggagccagagtgtacagttcccaatgttgaagcc
cactcgccatctcccagctgtagtagtataattgagccagcaaactataaccagccgccg
gaatttggaggaacagcccaggggaaaaggcaaacctggtataatagcacgctagcatca
aggaggaaaaggttgactgctcattttgaagatcttgagcagtgttacttctccaacaaa
atgtcacgcatctcagacgaaggcaggaacttgaatcaactggatgactttatggagtgt
ctctccaagttcactcgctacaattctgtgcgacccctggccacgctctcctatgccagc
gacctctataatgggtctagtattgtctccagcattgagtttgaccgtgattgtgactac
ttcgccatcgctggtgtgaccaagaagatcaaggtgtttgagtacggcactgtgatccaa
gatgcagtggacattcactatcctgtcaatgaaatgacttgcaattctaaaatcagctgt
atcagctggagtagctatcacaagaacctcctggccagcagcgactatgagggtacagtc
atattatgggatggatttaccggtcataggtccaaagtgtaccaggagcatgagaaacgg
tgctggagtgttgactttaatctgatggacccgaagttgttagcatctggctctgatgac
gctaaagtgaagttgtggtcaaccaatctggacaactccgtggccagcattgaagctaag
gctaatgtctgctgtgttaagttcagtccaacctcccggtatcatctcgcctttggctgt
gcagatcactgtgtccattactatgacctccgcaacactaagcagccaatcatggtgttc
aaaggccatcggaaagctgtttcctatgctaagtttgttaatggagaggagatcgtttct
gcgtcgacagacagtcagctgaagctgtggaatgtcaacaaacctcattgcctgcgctcc
ttcaagggtcacatcaatgagaagaactttgttggcctggcctctaatggagactatatt
gcctgtggcagtgagaacaattccttgtacctgtactacaaaggactttccaagactctt
ttaacattcaagtttgacacagtaaagagtgtgcttgataaagataagaaggaagacgac
accaatgagtttgtcagtgctgtctgttggagggcgttgcctgatggagagtcaaatgtg
ttgattgctgcgaacagtcaaggaacaattaaggtacttgagcttgtctga
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