Phycodurus eques (leafy seadragon): 133411905
Help
Entry
133411905 CDS
T09682
Symbol
tnr
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04510
Focal adhesion
pee04512
ECM-receptor interaction
pee04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133411905 (tnr)
04518 Integrin signaling
133411905 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133411905 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pee00536
]
133411905 (tnr)
Glycosaminoglycan binding proteins [BR:
pee00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133411905 (tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
EGF_2
EGF_Tenascin
FN3_Tor_3rd
Fn3_Dep-1_2nd
Fn3_VIN3
DUF4998
Interfer-bind
DUF7949
Motif
Other DBs
NCBI-GeneID:
133411905
NCBI-ProteinID:
XP_061550687
LinkDB
All DBs
Position
13:complement(16572682..16746911)
Genome browser
AA seq
1385 aa
AA seq
DB search
MPLALKHHKATVPTQGWILAFALFLALQGATYAAPSGDNQLVRTTRVRRQIPDGETSSAS
SPNQTMQEQPLVFNHVYNINVPVESLCSVDLDTAAPPAPEDGPRAELGSRSSVKRPLDPI
GPTEYTEQTLDADSQVTFTHRISIPKAACGCPATVTIQQLATRVEMLERELSMLRAQCGS
GCCRENPAMGRFDYFPGCNGHGSFSPELCSCICDEGWTGKNCSDPRCPDDCSGQGACIEG
ECVCDRDFVGENCSEPRCPADCSGRGLCIDGECMCEDSFTGEDCMVGRCVNDCSGQGLCV
NGTCQCRPGYVGEDCSLVYCANNCSQKGICKDGFCVCQDGYAGDDCNSVAPAMNLKVRGV
TDRDIELEWEGSVVLTDYLVTYTPSSPGGVQLEIRLPGNTTSCTISDLDAGMEYNVNMFA
VINNSISVPASITVATYLSNPDGLVFKSITETSVEVQWQPSYYSFDGWEISFIPKDNDGG
MTAQLPSTITSFLQTGLRPGEEYTVNLVALRDQGRSQPFTAAVTTLIDGPTQLAVRDVSD
TVAFLEWTTPKAKIDQIVLRYGLVGGEGPRTTFRLQPTLSQYTLQVLRPGSRYEVSVSGV
RNGNASGSISIEFTTALSFFSEIDAPKNLRLLSKTSTTLELEWDNSEAQVEAYQVVYSTL
AGDQYEKVIVPRNEGDTTKATLTDLLPGTEYGIGISGMRGSNQSTSATMNARTGLDVPMD
LTVTASTDNTITLVWGTVQGPIDFYKVTYTSSSGVSTELTVPRDETTTTLTDLEPGTEYT
ITVAAKRGRQQSNVASIDAFTGIRPVSHLYLSEVTSDSVLVAWSSPAPPADVFILSYSSA
DGTDTSKVTLDGSKTRSLVQGLLPATQYTVSLITIQGDVTSEPITASLTTGMDPPKQMTV
TAVAEDIVTISWIKPLAPFEYYKLSYQSARGRVDSVVIDSDVTNYTLSSLFPATEYEISL
NAVRGSQESKIVSASVFTAMDMPSELTALNITPQGALLRWNPPMSNVDNYVLTLTHDQVT
ADTFLVEGNKQEHQLSNLKPSTSYSVALYATKGPLTSGTVIANLQTPMDAPLNLTASEVN
HRSALISWQPPISEIDNYMLTYKSPDGNRKELILDAEDTWIRLEGLPETTEFTVKLQAAR
GLDTSAVVSTTFTTGSRLFATPQNCAQHLLNGETLSGVYTIYINRDPSQGVQVYCDMSTD
EGGWIVFQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIQRVSAQGRYELRIDMKDG
QESVYANYDKFSLGDARNLYKLRIGEYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCALS
YKGAWWYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPFNFRSIGSKRR
RSAPV
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgccacttgccctgaagcaccacaaggccactgtgccaacacagggctggatcctggcg
tttgctctttttctggctctacagggtgctacttatgctgctccctccggagacaaccag
ctggtccggacgacccgagtgaggagacagatcccagatggagaaacctcctcagcttcc
tcacccaaccagacaatgcaggagcaacctctggtcttcaaccatgtctacaacattaat
gtacccgtggaatcgctctgctcggtcgaccttgacaccgctgcaccacccgccccagag
gatggcccccgtgctgagcttgggtcccgatcctctgtaaagcgaccactggacccaatt
ggaccgacagagtacactgaacagacgctagatgcagacagccaggttacgttcactcac
cgtatcagcatccccaaagcggcgtgtggttgtccggcgactgtcacaatccagcagctg
gccaccagggtggagatgctggagagagagctttcaatgctccgagctcagtgtggatca
ggttgctgtagggagaacccggccatgggccgtttcgactatttcccgggatgcaatggc
cacggcagcttcagcccggagctatgtagctgcatttgtgacgaaggctggactggcaaa
aactgctcggatccccgttgccctgacgactgctccggccagggcgcgtgcatcgaaggg
gagtgcgtgtgcgaccgcgactttgtcggggaaaactgctctgagcctcggtgcccggcc
gactgctccggccgcggtctgtgcatcgacggggagtgcatgtgcgaggattccttcacc
ggggaggactgcatggtcgggaggtgtgtgaacgactgctcgggccaagggttgtgcgtc
aacggaacgtgccagtgccgacccgggtatgtgggggaggactgctcgctggtgtactgc
gccaacaactgcagccagaagggaatctgcaaggacggattctgtgtgtgccaggatggc
tatgctggagatgactgcaactctgttgcacctgccatgaacctgaaggtccgaggtgta
acagacagagacatcgaactggagtgggaaggttctgtggtcctgacggattatctcgtg
acctacacaccaagcagcccgggaggtgtccaactagaaatccggctcccggggaatacc
acatcctgcactatctcagacctggatgcaggcatggagtacaacgtcaacatgtttgct
gtcattaataacagcatcagtgttcctgccagcattactgtcgcaacctatctctccaat
ccagatggtttagtcttcaaatccattacagagacgtcagtcgaggtccagtggcaacct
tcctactattccttcgatggctgggagatcagcttcattcccaaggacaatgacggcggg
atgacagcccagctgcccagcaccatcacatcctttttacaaactggtctgagaccaggc
gaggagtacacagtgaacctggtggcgctcagggatcagggtcgcagtcagccctttacc
gctgccgtcacgacactgatcgacggccccactcagctggctgtgcgcgatgtgtctgac
acggtagcgttcctagagtggaccacgccgaaagccaaaattgatcagattgtgttgcgt
tacggcctcgtgggaggcgagggcccacgcactacctttcgcctccagcctacgctcagc
cagtataccctgcaggtccttcgtcccggttcccgttacgaggtgtccgtgagcggagtg
aggaacggaaacgcgagcggttccatttccattgaatttacaactgctttatcgttcttc
tcagagatcgacgcccccaagaacttgcgtctcctctccaagacctccaccaccttggag
ttggaatgggacaacagcgaggcgcaggtggaagcctaccaggtggtgtacagcacactg
gcaggtgatcaatacgaaaaggtcattgtaccaagaaatgagggagacaccacaaaggcc
actctcaccgacctactgcctggcacagagtacggtattggcatttctggcatgagaggc
agtaaccagagcacatcggccactatgaacgccagaacgggtctggacgtgcccatggat
ctaactgtcacagcatctacggacaacaccatcaccttggtgtggggcacggtccagggc
cccattgacttctacaaagtcacctatacatcatcttcaggcgtgtctactgagctgact
gtccctagagatgaaaccactaccactctgacagacctggagccgggcacggaatacact
atcactgtggcagccaagagaggcagacagcagagcaacgtggcttccatagatgccttc
acagggatcaggcccgtttcccacctctacttgtctgaggtgacttccgactcagtgctg
gtggcatggagctcaccggcaccgccggctgacgtcttcatcctcagctacagttctgct
gatggcaccgacacctctaaggtgaccctggacggctccaagacgaggtcgctagtgcaa
gggctgcttccggccactcagtacaccgtcagcctaatcacaatacaaggggacgtcact
tctgagcctattacagcatcccttacgacaggtatggacccacccaagcagatgacggtg
accgccgtggctgaggacatagtgactatttcgtggataaaacccctggctccatttgaa
tattataagctttcctaccagtcagccagaggtcgagtggacagcgttgtgattgacagc
gatgtgaccaactacaccttgtccagtctgttccccgctaccgagtatgagatcagtctc
aacgcggtcagagggagccaggagagcaaaattgttagcgcctcggttttcacagccatg
gacatgccatcagagttgactgcactcaacattactccgcaaggagccctgctgaggtgg
aacccccctatgtccaacgtcgacaattacgtgctgactctcacacatgaccaggtgaca
gcagataccttcctcgtggagggcaacaagcaggaacatcagctatccaacctgaagccc
agcacctcctactcggtagccctctatgccaccaagggacccctcaccagcggcactgtc
atcgccaacctccaaacacccatggacgctcctctgaacctgacagccagcgaagtgaat
caccgcagcgctctcatctcctggcagccgcccatctctgaaatcgacaactatatgctc
acctacaagtcacctgatggcaaccgtaaagagttgattctcgacgcagaggacacgtgg
attcgcctggagggtctgcccgagaccaccgagttcaccgtcaagctgcaagcagcgagg
ggtctggacaccagcgctgtcgtctccacgaccttcaccacagggagtcggctgtttgcg
acgcctcagaattgcgcccagcacctgctgaacggggagacgctgagcggcgtctacacc
atttacatcaacagggaccccagccagggcgtgcaggtgtactgtgacatgagcacggac
gaaggaggctggattgtgtttcagcgacgtcaaaacggcctgacagatttttccaggaag
tggagtgactaccgggtcggctttgggaacctggaggatgaattctggttgggtttggac
aacatccagagggtctccgctcagggccgctacgagctgaggatcgacatgaaggacggg
caggagtcagtctatgccaattatgataaattctccctcggagatgcaaggaacctgtat
aagctcaggataggagagtacaacggcaccgccggcgactctctaagctaccaccaggga
cgacccttctccacaaaagacagggacaacgacatcgctgtcactaattgtgccttgtcg
tacaaaggagcctggtggtacaagaactgccaccgtgccaacctaaacgggaagtacggc
gagtccagacacagtcagggaattaactggtaccactggaaaggtcacgagttctcaatt
cccttcgtggagatgaagatgaggccgttcaacttccgtagcatcggcagcaagaggagg
cggtcggcgcccgtatag
DBGET
integrated database retrieval system