Phycodurus eques (leafy seadragon): 133412158
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Entry
133412158 CDS
T09682
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04382
Cornified envelope formation
pee04510
Focal adhesion
pee04512
ECM-receptor interaction
pee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133412158
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133412158
09142 Cell motility
04820 Cytoskeleton in muscle cells
133412158
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133412158
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pee04147
]
133412158
00536 Glycosaminoglycan binding proteins [BR:
pee00536
]
133412158
Exosome [BR:
pee04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133412158
Glycosaminoglycan binding proteins [BR:
pee00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133412158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133412158
NCBI-ProteinID:
XP_061551290
LinkDB
All DBs
Position
13:16068715..16099380
Genome browser
AA seq
1656 aa
AA seq
DB search
MGRRVSLLPLILFAAMLMDTGGNRCVCRGRSPCHCEGVKGTRGDRGAPGGQGLPGPEGRK
GNDGHVGPIGPKGNTGPDGPVGPVGDPGPEGKEGFAGSHGLPGIPGLQGPPGPQGVPGCN
GTDGEDGLPSAHGAPGLDGLPGPPGAAGQKGQSAVSVSAIPGPPGLPGRTGEPGEPGLRG
ITGPQGDWGLRGPDGVPGPVGMPGSKGQGGLGIPGPAGPKGRQGPPGPPGSPGRIREYFT
ESLVLKGEKGDQGATGDKGCKGPAGDPGGGFSTRGVKGDEGQVGPEGRMGKNGKPGQPGF
MGRPGPRGVPGYAGTTGGTGAKGDQGPPGPPGEIKIVAPVLLKGYTGDPGNPAQPGIPGR
PGAVGFPGPDGPPGDSSDLQGPRGPDGALGPKGDRGNPGDSYPGPSGPEGDPGEQGPPGD
QGPPGLPEDKDKVKVNGLPGMKGVRGMPGVAGYDGPYGMKGGKGEPCYECMGKGVPGPPG
PPGPHGIPGYNQGPGDKGEPGFPGSRGLPGSPGRIGITGAPGFPGQKGDSYSDIRPGVKG
EKGDTGYPGRLGVDGFPGSPGLQGRKGVQGPLGDPYSGEGDKGFPGPTGLLGRPGPQGYP
GAVGYGPIGPPGTKGNFGVPGFPGQPGIPGQKGEPGHIHSKGFPGLPGFRGQPGLPGRQG
VPGVPGFIGRPGSPGQKGESGDGLYPGRPGLPGEKGDKGFPGIKGLPGIGLPGRPGQQGP
PGLPGMKGDGGYGHPGPKGQQGIPGNDGAQGPRGDPGIPGSPGSQGLPGNPGFPGERGNK
GEIGPPGPPGTKSSCNDTLPGPEGLAGPDGDPGLPGPNGLPGEKGNRGFPGFGSPGHPGE
PGHPGPTVPGPQGVTGPKGIKGQNGRPGPTGMRGDPGPDGLPGFGPQGLPGIIGPTGGIG
NPGREGNIGSLGPPGMTGDPGPRGPPGAPSPIPLDLIGPSGETGSPGYPGPVGPWGDTGS
TGAKGQSGNTGGPGRPGQTGPPGDQGIPAFLKGRRGPAGIPGDPGNRGNPGSKGLKGDKG
IPGGPGADGTPGSRGYKGEKGGPNYYGYGPPGPIGQTGEPGLSNTHIMKGEKGAPGIVGA
PGSPGFHGLKGEPGHTGQNGSPGYQGPRGLDGPQGHKGRGGPNGPPGPPGPPGGFGPQGS
KGNQGQDGIPGPPGQKGDTLAIEGPPGPRGLPGQLGPPGNPGSPGSASSGNPGLRGDKGH
PGPHGVSGPRGQPGRDGACFPGVKGDRGLDGSLGRPGYPGPPGPPGPPGPPGPGWKGNRG
DPGPTGSPGYTGLPGDAGIPGPPGPRGQPGNPGARGDSGPPGNNGYPGDKGDPGYIPGPP
GPPGTKGFPGRTGVKGKPGYGKVIYEPGPPGLPGSPGNTGRSGETGPAGPTGQSGPPGTK
GVQGSSPVGPPGFTGLKGDKGVSGLQGLPGRPGDPGNRGQKGLPGESGYGYVTSFLIARH
SQSVTVPDCPEGTTLIYCGYSFLFMNGNERAHGQDLGTSGSCLPRFSPMPFLFCDTESNC
RYASRNDYSYWLSTDAPMLPSMVALTGERLSSHISRCSVCETTSNVIAVHSQTTLIPECP
IGWQSLWSGYSFVMQTGAGADGSSQPLVSPGSCLEHFHQVPFIECHGRGTCNYYPDSYSY
WLASLNPDMFSKPIPQTVKGPSQESIVSRCRVCRKQ
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaagagtgtcgctgcttcctcttatcctgtttgctgcgatgctgatggacacc
gggggcaataggtgtgtgtgcagaggaaggtcaccgtgtcactgtgaaggagtcaaaggc
acccggggagacaggggtgctccaggagggcaaggacttccaggaccagaaggccgcaaa
ggaaatgatggtcatgttgggccaatcggaccaaagggcaacactgggccggatggacct
gtaggccctgtgggagatccgggtcccgaaggcaaagaggggtttgcaggctctcacggt
ttaccgggcatcccgggtctgcagggcccacctgggccacaaggggttccgggctgcaat
ggaacagatggagaagatggacttcctagtgctcacggtgcccctggacttgatggactt
cctggtccaccgggtgctgctggacaaaagggtcagtctgcagtatcagtgagtgcaatt
ccggggccaccaggacttcctggaagaacaggcgagccgggtgagccgggtttgcgggga
attactgggccacagggagactggggactacgtggccctgatggggtaccaggccctgta
ggaatgccaggatcgaagggtcaaggagggctaggtattccaggaccagctggaccaaag
ggtcgacaagggcctccaggcccacccggatcaccgggtcggattagggaatatttcact
gagagccttgtgttaaagggtgaaaaaggagaccaaggagctacaggagataaaggctgc
aaaggtcctgcgggagaccctggtggcggcttttccacaagaggagtaaagggagacgaa
ggccaagtgggtccagaaggaaggatgggcaagaatggcaaacctggacaacctggattt
atgggaaggcctggtcctagaggtgttcctggatatgcaggaacaacaggagggacgggt
gcaaaaggggatcaaggtcctcctggtccacctggggaaataaaaatagtggcacctgtg
ctgctaaaaggatacactggagatccaggtaatcctgcccaaccgggaattcctggacgc
ccaggtgctgtgggatttcctggacctgacggaccaccaggagattcatctgatctacaa
ggaccacgaggtcctgatggtgctctgggtcccaaaggggatcgcggcaacccgggcgat
agttatccaggaccttctggtccagaaggggatcctggtgaacagggacctcccggagat
caaggcccacctggactccccgaagacaaagataaggtcaaagtcaacggtctgccagga
atgaagggtgtcagaggtatgcctggggttgcaggatatgacgggccgtatggaatgaaa
gggggcaagggagagccctgctatgagtgtatgggaaaaggggtaccaggtccaccgggt
cctccaggtccacatggaataccaggatataatcaaggaccaggagataaaggtgagcca
ggtttcccaggaagtcggggcttgcctggaagtccgggtcgtattggtataacaggtgct
ccaggcttccctggacaaaaaggagactcatattctgatatcagaccaggagtaaaaggg
gagaaaggagacacaggataccctggaaggctcggagtagatggcttccctgggtctccg
ggattgcaaggtcgcaaaggtgtccaaggccctttgggggatccgtatagtggagaggga
gacaaaggctttccaggtccaacggggcttttggggagaccaggaccacaaggctaccct
ggggcagtgggatatgggcctattggacctccaggaactaaggggaattttggggtacct
ggtttccctgggcaacctggaattccaggccaaaaaggagaaccaggccatatccactca
aaaggttttcctggactacctgggtttagaggtcaacctgggttaccaggaaggcaaggt
gttccaggtgttccaggtttcataggcagaccaggttcaccaggacagaaaggggaaagt
ggtgacggattatatcctggacgaccaggtttaccaggagagaaaggtgacaaggggttc
ccaggtatcaaaggtctcccaggtatcggtcttcctggtcgaccaggccaacaaggccct
cctggtcttccaggaatgaagggtgatggtggttatggacatccaggacccaaaggccaa
caaggcattcctggaaatgatggggctcaaggacctagaggagatcctggaatccctggc
tcacctgggagccagggattaccaggaaatccaggtttcccaggagaaagagggaataaa
ggggaaatcggaccaccgggacctccgggtactaaaagctcatgtaatgatactcttcct
ggaccagaagggctagcagggccagacggcgatccaggactgccaggacccaacgggctg
ccaggtgaaaagggaaacagaggattccctgggtttggtagccctggccatccaggtgag
ccaggtcatcccgggccaacagtaccaggtccccaaggggttactgggcctaaaggaatt
aagggacaaaatgggcgaccaggcccaacaggaatgagaggagaccctggaccagatggg
ttaccaggatttggaccgcaaggattgcctggaattataggacccacgggcggaattggt
aaccctggtcgtgagggaaacataggttccttgggtccaccaggaatgactggggaccca
ggacctaggggtcccccaggagctccatctccaatacctttagatcttattggcccctca
ggagagactggctctccaggttatcctggaccagttggtccttggggtgatactggaagt
actggagcaaaaggacaaagtggtaatactggaggacccgggaggcctgggcaaacaggt
cctccaggtgaccaaggtattccagcattcttgaagggacgccggggacctgctggaata
ccaggagatccaggaaaccgaggcaatcctgggtcaaaaggactaaagggagacaaggga
attcctggagggcctggcgcagatggtacaccaggttcaaggggttacaaaggagaaaag
ggaggaccaaactattatggatatggcccacctggaccgattggacaaacgggggaacca
ggattaagcaacacacacataatgaagggtgaaaaaggagcacctggtattgtaggagct
ccgggttcaccaggatttcacggactcaaaggagaaccaggacacactggacaaaatggt
tcacctggatatcaaggaccaagaggtttagatggccctcagggacacaaaggacgtgga
ggaccaaatggaccaccaggtccccctggcccaccaggtggttttggtcctcaaggatcc
aaaggcaaccagggacaggatgggatccctggaccaccaggacagaaaggagatacactt
gcgatagaaggaccacctggtccccgtggtctcccaggtcagctaggtcccccagggaat
cctggttctcctggctctgctagttcaggaaatcctggattaagaggagacaaaggacat
ccaggaccacacggggtctctggtcccagaggacaaccgggaagagacggtgcatgtttt
cccggggtaaaaggagaccgtggacttgatggcagtctgggtaggccaggttatcctggt
ccacctggacctccaggccctccaggccctccaggacctggatggaaaggtaacagaggg
gacccgggcccgacagggagcccaggttacactggactcccaggagatgcaggcattcct
ggtccacctggtccaagaggccaacccggaaatccaggagcaagaggtgattctggtcct
cctggaaacaatgggtaccctggtgacaagggagaccccggctatataccgggcccgcct
ggtccacctgggacaaaggggtttccaggaagaactggcgtgaaaggtaaaccagggtac
ggcaaggtgatatatgaaccaggacccccaggcttacctggttcccctggcaacactggg
cggtctggggaaactggaccagcaggaccaacgggccaatcaggtcccccgggtaccaaa
ggagtccaaggttcaagcccagtgggaccacctggatttactggtcttaagggagacaaa
ggagtgtcagggttgcaaggtctaccaggcagacccggagatccaggcaacaggggccaa
aagggattaccaggagaaagtggttacggctatgtgacaagcttcctgatagcacgacac
agtcaaagtgtgactgtgcctgattgccccgaaggcaccacccttatttactgtggctac
tctttcctcttcatgaatggaaatgagcgagctcacggccaggaccttggcacatcggga
agctgtttacctcgattctcccccatgcccttcctcttctgcgacacggagtcaaactgc
cgctatgcctctcgtaacgactactcctactggttgtccaccgatgcacctatgcttccc
tccatggttgccctcacaggggagaggctgtcctcccacatcagcaggtgctcggtgtgc
gaaactacctctaatgtcatcgcagttcacagtcagacaactctaataccagaatgtccc
ataggctggcagtccctctggagtggatattcatttgtcatgcaaacaggggctggtgca
gatggctcttcccagccactcgtgtctcccggctcgtgccttgaacatttccatcaagtg
ccattcatagagtgtcatggcagggggacgtgcaactactaccctgattcgtacagctac
tggctggcatcactcaaccctgacatgttcagtaaacccattccacagacggtgaagggg
ccttctcaagaaagcattgtcagtcgttgtcgagtttgtcgcaaacaatag
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