Phycodurus eques (leafy seadragon): 133412160
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Entry
133412160 CDS
T09682
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04510
Focal adhesion
pee04512
ECM-receptor interaction
pee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133412160
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133412160
09142 Cell motility
04820 Cytoskeleton in muscle cells
133412160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pee04147
]
133412160
00536 Glycosaminoglycan binding proteins [BR:
pee00536
]
133412160
Exosome [BR:
pee04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133412160
Glycosaminoglycan binding proteins [BR:
pee00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133412160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133412160
NCBI-ProteinID:
XP_061551294
LinkDB
All DBs
Position
13:complement(16041954..16102047)
Genome browser
AA seq
1671 aa
AA seq
DB search
MRSSRAALTWCALRWILVLLVTAKQLNAGNVEGPCDGRDCSVCRCHPAKGARGSPGKSGK
QGPRGPMGPWGSEGQAGEKGRLGAQGSPGPEGLKGDRGKTGPPGFPGHEGSLGHPGAGGE
PGLPGVDGCEGARGKPGVPGIPGLDGLHGTPGYPGPKGLKGEPLYSDSLPGLPGDPGRPG
DRGLPGPVGDPGPKGYIGAPGPPGNQVSIGIKGIRGPPGDPGRPQPGTKGDDGEQGPPGP
EGPEEVIEFPPDFLPPKGYTGDRGPPGQCGPKGKQGGRGDSFSQGMKGEAGILGFPGLRG
FSGSPGSSGPLGPEGLPGDRGLPGLIGTIGPKGYHGDPGLPGPLQYLKGSTLRGEKGEKG
YPGNPGLPGDPGVMGMHGPPGPKGLPFPDYLSVPGPSGPPGPKGFKGEPGRYNDLINPLP
GPKGRKGLGGFKGVTGLPGPPGCGDYICEPGYPGDSGDRGPPGPHGNKGFKGYKGCEGEC
ECRFVRGPPGPPGQPGFPGAPGLTGTPGIEGDPGLKGEEGATGPPGVKGYVGLKGVKGQK
GDDIISTVKGPKGNRGDTGHPGSTGQFGKPGLDGPPGLTGDPGPPGASYIGSPGPKGDPG
MFGSKGLPGIPGPPGPGFQGPQGPAGPKGDQGYPGTQGILGRKGPPGDTELCCHDNVTGS
PGLKGEPGSPGIPGESGRDGLLGAPGLPGPKGMKGDDGGIGVIGSPGPQGLNGDRGDRGM
TGNSLDGSPGTPGLPGPPGKKGYPGDVLNALPGPPGQPGQPGDRGRKGIPGSPGSQGFPG
IQGQPGRPGPKGEQGFNGDHGAPGLPGLPCVLCELSGPPGPPGPPGNPGPRVPGIPGPRG
PRGDPGLSGHGHVGVPGLLGLPGIPGPAGQRGPAGSPGDPGNDGWLGQKGELGFPGRDGD
RSLPGPPGPSGPRGKQGERGFIGQPGGTGEPGYPGIKGIRGPKGLPGEARLVSLTKGAQG
TPGRRGHPGPPGPIGAKGQSGGPGDPGPEGFPGSPGIKGDAGVPGRPGIPGDSGDPGLKG
FPGPRGYLGNDGALGDPGSRGHPGIPGVPGFPGAKGDPGDSFGQPGSPGPKGIKGEMGFS
APIGDPGDTGDLGPRGYSGMPGQPGTPGEPGMHGGLGFPGPIGPPGRPGVPGVQGDSGYV
GPLGPPGPTGPSGLPGPPGLSGLDGLRGPKGMKGASGVTFPGRPGPDGYPGNKGSSGMPG
PQGPSIPGPKGLMGPPGDSGPPGSQGEPGYPGRECDKPLPGPVGDAGSEGATGPQGPPGQ
RGEPGSLFFHKGDPGPNGLPGPPGRKGDKGYQGNQGASSYPGIPGPKGERGPPGSRGFQG
AKGLRGDPGPLGRKGVTGQPGDIGAKGAHGDSIYEPPRRAPDGPPGPPGYPGPNGFPGTM
GPPGRNGSKGPKGPSGSWGLPGPQGPPGIDGSIGEQGDFGQPGFIGPQGSPGGRGDPGVP
GYTRTSSSGFLFVLHSQSVQVPNCPDGSSRLWVGYSLAYLEGQEKAHTQDLGQAGSCLPM
FSTMPFSYCNKAACHYSARNDKSYWLSTTAAIPMMPLFGHEIRSHISRCVVCETLLPAVA
FHSQDPSIPPCPSGWRSLWTGFSFLLQTGAGDEGGGQSLTSSGSCLKDFRTHPIIECQGA
RGACHYFANLYSFWLTAVRPIDQFVKPRPSTIKAADEQRRKASQCQVCLRQ
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgagatcctcacgtgcagctttgacatggtgtgccctcaggtggatccttgtcctgctt
gtcactgcaaagcagcttaatgcaggaaatgtggaagggccatgtgatgggagagattgt
tctgtgtgccgatgtcatcctgccaaaggtgcacggggatcgccaggtaaatcaggcaag
caaggacctcggggtccaatgggaccatggggcagtgagggccaggctggagagaaaggc
aggttgggagcacagggatcaccaggcccagaagggctcaaaggagaccggggcaaaact
ggaccacctggttttcctggtcacgagggctcattgggtcaccctggagcgggtggtgag
cctggtttgcctggagtagacggctgtgagggggctcggggtaaacctggggtcccgggt
attcctggcctggatggtctgcatggaacacctggatatcctggaccaaaagggcttaag
ggagaacccttgtatagtgattcccttcctggacttcctggagatcccggtcgacctgga
gatcgtggtcttccaggcccagtaggagaccctggacctaaaggctacattggggctcca
ggcccacctggaaatcaagtctcgatagggattaaaggtatccgaggaccaccaggggac
cctggaagaccacagccaggcacaaaaggagacgacggtgaacaaggtccgcccggtcca
gaaggaccagaagaagtcattgagtttcccccagatttcctcccacccaaaggttacacg
ggagacaggggtccccctggacaatgtggaccaaagggcaaacaaggtggccggggagac
tccttcagtcaaggaatgaaaggagaggcaggaattcttggtttccctggacttcggggt
ttttcggggtcacctggcagttcaggacctttaggacctgagggtttaccaggggatagg
gggcttccaggtctcattggaacaattggaccaaagggctatcatggagatccaggtctt
cctggtcccttgcagtatttgaaagggtctactctcagaggagaaaagggtgaaaaaggc
tatcctgggaatcctggattaccaggtgaccctggagtaatgggtatgcatggacctcct
ggcccgaaaggactaccatttccagattatctgagtgtgcctggtcctagcggacctccg
ggtcccaaaggctttaagggagagccagggaggtacaatgacttaatcaatccactccca
ggaccaaaaggaagaaaaggactcggtgggtttaaaggtgtcactggacttcctggtcct
ccagggtgcggcgactatatatgtgagcctggttatccaggtgactctggtgatagagga
cccccaggacctcatggaaacaaaggcttcaaaggatataaaggttgtgaaggagaatgt
gaatgtcggtttgttcgaggaccgcctggtccgcctggtcaacctggttttccaggagct
ccaggattaacgggaactccagggattgagggagacccaggactgaaaggagaagagggt
gccacagggccacctggggttaaaggatatgtgggtttaaaaggagtgaagggacaaaag
ggggatgatattatttcaactgttaaaggtccaaagggaaaccgaggagacactggacat
cctggttccactggacaatttggtaaaccaggactagatggccctcctgggctgacagga
gaccctggaccacctggggcctcatatataggtagccctggtcccaaaggagacccaggt
atgtttggttctaaaggtcttccagggattccggggcccccaggtcctggtttccaaggc
ccccagggtccagcaggaccgaaaggagaccaagggtatccaggcactcaaggaattctt
gggcgaaagggccctccaggtgacactgaactctgttgccatgacaatgtgactggatca
ccgggtcttaagggagaacctggttcaccagggattccaggtgaatctggaagagatggc
ctcctaggagccccaggacttccaggacctaaaggcatgaaaggagatgatggtggaatt
ggagtgatcggatctccagggccacaaggtttaaatggagatcgaggtgaccgtggtatg
actggaaatagccttgatggttctccaggcactcccggactaccaggaccaccagggaag
aaaggttaccctggagatgtgctcaatgctttgccaggtcctcctggtcaacctggccaa
cctggagatagagggagaaagggaattcctggcagtccaggaagccaagggtttccaggt
atacaaggccaacctggacggccaggtccaaaaggagaacaaggatttaatggggaccat
ggagctccaggacttccaggtctaccatgtgtattatgcgagttaagtggacctcctgga
cccccaggtcctccaggaaaccctggaccgagagtgccagggattcctggtccaaggggc
ccaaggggagatccaggcctatctggtcatggccatgtgggtgtaccgggtctccttggt
cttcctggtataccaggcccagcaggacaaagaggccctgctggatctccgggagatccc
gggaatgatggttggctaggacagaaaggtgagttggggttccctggcagggatggggac
agaagcttaccagggcctcccggaccttcaggacccagaggcaagcagggggaaagaggc
tttattggtcaaccaggtggcacaggagaaccaggatatcctggtattaaaggaatacgt
ggccccaaaggattacctggagaagcaagacttgtgagtttaacaaagggagcacaagga
acccctggcagaagaggacatccaggcccaccaggaccaataggtgcaaagggccaaagc
ggagggccaggtgatccaggaccggaggggttccctggttcaccaggaattaaaggtgat
gctggtgtaccagggagacctgggatacctggagattctggggaccctggattgaaaggt
tttcctggaccaaggggataccttgggaatgatggcgctctgggagatccaggatcaagg
gggcatccaggaattccaggggttccaggatttccaggtgccaaaggtgatccaggagac
tcttttggacaacccggtagcccagggccgaaaggaattaaaggggaaatgggattcagt
gcaccaattggggatcccggggatacaggcgatctgggtccaaggggatactcgggaatg
cctggacagcctggcactcctggtgaaccaggaatgcacggtggattaggttttcctggg
cctattggccctccgggtcgtccaggtgttccaggtgttcaaggtgatagtgggtatgtg
gggccccttggtccaccaggcccaactggaccttcaggactccctgggcctcctggtctt
tctggactggatggtcttcgaggaccaaaagggatgaaaggagctagcggagtaactttt
cctggccgcccaggaccggatggctatcctggaaacaaaggttccagtggaatgccgggg
cctcaaggaccctctattcctgggccgaaaggccttatgggtccaccaggtgactcaggt
cctcccggttctcaaggtgaacctggttaccctgggagagaatgtgacaaacctttgccc
ggacctgttggagatgcaggatctgaaggggctactgggccccaaggtcctcctgggcag
cgaggtgaaccaggcagcctttttttccacaaaggagatccagggccaaatggcctacct
gggcctccaggccgaaagggagataagggctatcaaggaaatcaaggagcttcatcatat
ccaggaattccaggacccaaaggtgagagaggccctcctggctccagaggttttcaagga
gctaaaggactcagaggtgatcctggacccttggggaggaaaggagtaactggccaacct
ggagacattggtgccaagggtgcccatggtgattctatttatgaacccccaaggagagct
ccagatgggcctccaggaccacctggttacccaggacccaatgggttcccaggcacgatg
ggtccacctgggcgtaatggatctaaaggaccaaaaggtccatctggctcttggggcctc
cctggaccccaaggacctcctggtattgatggttctataggtgaacaaggagattttggt
cagccaggattcatagggcctcaaggcagcccaggtggacgtggtgacccaggcgtgcca
ggttatacgagaacatcaagctcaggcttcctgtttgttcttcacagccaatcagttcaa
gtgccgaattgccctgatggcagcagtcggctttgggtgggctatagtctggcctacttg
gagggacaggagaaggctcacacacaagaccttggtcaagctggctcttgcttgcccatg
ttttccaccatgccgttctcctactgcaacaaagctgcctgtcactactcggctcggaac
gacaaatcctactggctctccacaactgcagccatacccatgatgccgctctttggccac
gagatcagatcccacatcagccgctgtgtggtttgcgagacgcttttgcccgctgtggcc
tttcacagtcaggatccatcgattcccccgtgcccatctggctggaggagcctgtggacg
ggcttctccttcctccttcaaacaggggcaggtgacgagggcggcggtcagtctctgacg
tcctctggcagttgccttaaggatttccgaactcacccgatcattgagtgtcagggtgcg
cgaggggcgtgtcactacttcgccaacctctacagcttctggctgaccgcagtacgcccc
atagatcagtttgtcaagccgaggcccagtaccatcaaagctgccgatgaacaacgacgc
aaagccagtcagtgccaagtctgcctcagacagtag
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