Phycodurus eques (leafy seadragon): 133412160
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Entry
133412160 CDS
T09682
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04382
Cornified envelope formation
pee04510
Focal adhesion
pee04512
ECM-receptor interaction
pee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133412160
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133412160
09142 Cell motility
04820 Cytoskeleton in muscle cells
133412160
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133412160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pee04147
]
133412160
00536 Glycosaminoglycan binding proteins [BR:
pee00536
]
133412160
Exosome [BR:
pee04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133412160
Glycosaminoglycan binding proteins [BR:
pee00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133412160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133412160
NCBI-ProteinID:
XP_061551294
LinkDB
All DBs
Position
13:complement(16041954..16102047)
Genome browser
AA seq
1671 aa
AA seq
DB search
MRSSRAALTWCALRWILVLLVTAKQLNAGNVEGPCDGRDCSVCRCHPAKGARGSPGKSGK
QGPRGPMGPWGSEGQAGEKGRLGAQGSPGPEGLKGDRGKTGPPGFPGHEGSLGHPGAGGE
PGLPGVDGCEGARGKPGVPGIPGLDGLHGTPGYPGPKGLKGEPLYSDSLPGLPGDPGRPG
DRGLPGPVGDPGPKGYIGAPGPPGNQVSIGIKGIRGPPGDPGRPQPGTKGDDGEQGPPGP
EGPEEVIEFPPDFLPPKGYTGDRGPPGQCGPKGKQGGRGDSFSQGMKGEAGILGFPGLRG
FSGSPGSSGPLGPEGLPGDRGLPGLIGTIGPKGYHGDPGLPGPLQYLKGSTLRGEKGEKG
YPGNPGLPGDPGVMGMHGPPGPKGLPFPDYLSVPGPSGPPGPKGFKGEPGRYNDLINPLP
GPKGRKGLGGFKGVTGLPGPPGCGDYICEPGYPGDSGDRGPPGPHGNKGFKGYKGCEGEC
ECRFVRGPPGPPGQPGFPGAPGLTGTPGIEGDPGLKGEEGATGPPGVKGYVGLKGVKGQK
GDDIISTVKGPKGNRGDTGHPGSTGQFGKPGLDGPPGLTGDPGPPGASYIGSPGPKGDPG
MFGSKGLPGIPGPPGPGFQGPQGPAGPKGDQGYPGTQGILGRKGPPGDTELCCHDNVTGS
PGLKGEPGSPGIPGESGRDGLLGAPGLPGPKGMKGDDGGIGVIGSPGPQGLNGDRGDRGM
TGNSLDGSPGTPGLPGPPGKKGYPGDVLNALPGPPGQPGQPGDRGRKGIPGSPGSQGFPG
IQGQPGRPGPKGEQGFNGDHGAPGLPGLPCVLCELSGPPGPPGPPGNPGPRVPGIPGPRG
PRGDPGLSGHGHVGVPGLLGLPGIPGPAGQRGPAGSPGDPGNDGWLGQKGELGFPGRDGD
RSLPGPPGPSGPRGKQGERGFIGQPGGTGEPGYPGIKGIRGPKGLPGEARLVSLTKGAQG
TPGRRGHPGPPGPIGAKGQSGGPGDPGPEGFPGSPGIKGDAGVPGRPGIPGDSGDPGLKG
FPGPRGYLGNDGALGDPGSRGHPGIPGVPGFPGAKGDPGDSFGQPGSPGPKGIKGEMGFS
APIGDPGDTGDLGPRGYSGMPGQPGTPGEPGMHGGLGFPGPIGPPGRPGVPGVQGDSGYV
GPLGPPGPTGPSGLPGPPGLSGLDGLRGPKGMKGASGVTFPGRPGPDGYPGNKGSSGMPG
PQGPSIPGPKGLMGPPGDSGPPGSQGEPGYPGRECDKPLPGPVGDAGSEGATGPQGPPGQ
RGEPGSLFFHKGDPGPNGLPGPPGRKGDKGYQGNQGASSYPGIPGPKGERGPPGSRGFQG
AKGLRGDPGPLGRKGVTGQPGDIGAKGAHGDSIYEPPRRAPDGPPGPPGYPGPNGFPGTM
GPPGRNGSKGPKGPSGSWGLPGPQGPPGIDGSIGEQGDFGQPGFIGPQGSPGGRGDPGVP
GYTRTSSSGFLFVLHSQSVQVPNCPDGSSRLWVGYSLAYLEGQEKAHTQDLGQAGSCLPM
FSTMPFSYCNKAACHYSARNDKSYWLSTTAAIPMMPLFGHEIRSHISRCVVCETLLPAVA
FHSQDPSIPPCPSGWRSLWTGFSFLLQTGAGDEGGGQSLTSSGSCLKDFRTHPIIECQGA
RGACHYFANLYSFWLTAVRPIDQFVKPRPSTIKAADEQRRKASQCQVCLRQ
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgagatcctcacgtgcagctttgacatggtgtgccctcaggtggatccttgtcctgctt
gtcactgcaaagcagcttaatgcaggaaatgtggaagggccatgtgatgggagagattgt
tctgtgtgccgatgtcatcctgccaaaggtgcacggggatcgccaggtaaatcaggcaag
caaggacctcggggtccaatgggaccatggggcagtgagggccaggctggagagaaaggc
aggttgggagcacagggatcaccaggcccagaagggctcaaaggagaccggggcaaaact
ggaccacctggttttcctggtcacgagggctcattgggtcaccctggagcgggtggtgag
cctggtttgcctggagtagacggctgtgagggggctcggggtaaacctggggtcccgggt
attcctggcctggatggtctgcatggaacacctggatatcctggaccaaaagggcttaag
ggagaacccttgtatagtgattcccttcctggacttcctggagatcccggtcgacctgga
gatcgtggtcttccaggcccagtaggagaccctggacctaaaggctacattggggctcca
ggcccacctggaaatcaagtctcgatagggattaaaggtatccgaggaccaccaggggac
cctggaagaccacagccaggcacaaaaggagacgacggtgaacaaggtccgcccggtcca
gaaggaccagaagaagtcattgagtttcccccagatttcctcccacccaaaggttacacg
ggagacaggggtccccctggacaatgtggaccaaagggcaaacaaggtggccggggagac
tccttcagtcaaggaatgaaaggagaggcaggaattcttggtttccctggacttcggggt
ttttcggggtcacctggcagttcaggacctttaggacctgagggtttaccaggggatagg
gggcttccaggtctcattggaacaattggaccaaagggctatcatggagatccaggtctt
cctggtcccttgcagtatttgaaagggtctactctcagaggagaaaagggtgaaaaaggc
tatcctgggaatcctggattaccaggtgaccctggagtaatgggtatgcatggacctcct
ggcccgaaaggactaccatttccagattatctgagtgtgcctggtcctagcggacctccg
ggtcccaaaggctttaagggagagccagggaggtacaatgacttaatcaatccactccca
ggaccaaaaggaagaaaaggactcggtgggtttaaaggtgtcactggacttcctggtcct
ccagggtgcggcgactatatatgtgagcctggttatccaggtgactctggtgatagagga
cccccaggacctcatggaaacaaaggcttcaaaggatataaaggttgtgaaggagaatgt
gaatgtcggtttgttcgaggaccgcctggtccgcctggtcaacctggttttccaggagct
ccaggattaacgggaactccagggattgagggagacccaggactgaaaggagaagagggt
gccacagggccacctggggttaaaggatatgtgggtttaaaaggagtgaagggacaaaag
ggggatgatattatttcaactgttaaaggtccaaagggaaaccgaggagacactggacat
cctggttccactggacaatttggtaaaccaggactagatggccctcctgggctgacagga
gaccctggaccacctggggcctcatatataggtagccctggtcccaaaggagacccaggt
atgtttggttctaaaggtcttccagggattccggggcccccaggtcctggtttccaaggc
ccccagggtccagcaggaccgaaaggagaccaagggtatccaggcactcaaggaattctt
gggcgaaagggccctccaggtgacactgaactctgttgccatgacaatgtgactggatca
ccgggtcttaagggagaacctggttcaccagggattccaggtgaatctggaagagatggc
ctcctaggagccccaggacttccaggacctaaaggcatgaaaggagatgatggtggaatt
ggagtgatcggatctccagggccacaaggtttaaatggagatcgaggtgaccgtggtatg
actggaaatagccttgatggttctccaggcactcccggactaccaggaccaccagggaag
aaaggttaccctggagatgtgctcaatgctttgccaggtcctcctggtcaacctggccaa
cctggagatagagggagaaagggaattcctggcagtccaggaagccaagggtttccaggt
atacaaggccaacctggacggccaggtccaaaaggagaacaaggatttaatggggaccat
ggagctccaggacttccaggtctaccatgtgtattatgcgagttaagtggacctcctgga
cccccaggtcctccaggaaaccctggaccgagagtgccagggattcctggtccaaggggc
ccaaggggagatccaggcctatctggtcatggccatgtgggtgtaccgggtctccttggt
cttcctggtataccaggcccagcaggacaaagaggccctgctggatctccgggagatccc
gggaatgatggttggctaggacagaaaggtgagttggggttccctggcagggatggggac
agaagcttaccagggcctcccggaccttcaggacccagaggcaagcagggggaaagaggc
tttattggtcaaccaggtggcacaggagaaccaggatatcctggtattaaaggaatacgt
ggccccaaaggattacctggagaagcaagacttgtgagtttaacaaagggagcacaagga
acccctggcagaagaggacatccaggcccaccaggaccaataggtgcaaagggccaaagc
ggagggccaggtgatccaggaccggaggggttccctggttcaccaggaattaaaggtgat
gctggtgtaccagggagacctgggatacctggagattctggggaccctggattgaaaggt
tttcctggaccaaggggataccttgggaatgatggcgctctgggagatccaggatcaagg
gggcatccaggaattccaggggttccaggatttccaggtgccaaaggtgatccaggagac
tcttttggacaacccggtagcccagggccgaaaggaattaaaggggaaatgggattcagt
gcaccaattggggatcccggggatacaggcgatctgggtccaaggggatactcgggaatg
cctggacagcctggcactcctggtgaaccaggaatgcacggtggattaggttttcctggg
cctattggccctccgggtcgtccaggtgttccaggtgttcaaggtgatagtgggtatgtg
gggccccttggtccaccaggcccaactggaccttcaggactccctgggcctcctggtctt
tctggactggatggtcttcgaggaccaaaagggatgaaaggagctagcggagtaactttt
cctggccgcccaggaccggatggctatcctggaaacaaaggttccagtggaatgccgggg
cctcaaggaccctctattcctgggccgaaaggccttatgggtccaccaggtgactcaggt
cctcccggttctcaaggtgaacctggttaccctgggagagaatgtgacaaacctttgccc
ggacctgttggagatgcaggatctgaaggggctactgggccccaaggtcctcctgggcag
cgaggtgaaccaggcagcctttttttccacaaaggagatccagggccaaatggcctacct
gggcctccaggccgaaagggagataagggctatcaaggaaatcaaggagcttcatcatat
ccaggaattccaggacccaaaggtgagagaggccctcctggctccagaggttttcaagga
gctaaaggactcagaggtgatcctggacccttggggaggaaaggagtaactggccaacct
ggagacattggtgccaagggtgcccatggtgattctatttatgaacccccaaggagagct
ccagatgggcctccaggaccacctggttacccaggacccaatgggttcccaggcacgatg
ggtccacctgggcgtaatggatctaaaggaccaaaaggtccatctggctcttggggcctc
cctggaccccaaggacctcctggtattgatggttctataggtgaacaaggagattttggt
cagccaggattcatagggcctcaaggcagcccaggtggacgtggtgacccaggcgtgcca
ggttatacgagaacatcaagctcaggcttcctgtttgttcttcacagccaatcagttcaa
gtgccgaattgccctgatggcagcagtcggctttgggtgggctatagtctggcctacttg
gagggacaggagaaggctcacacacaagaccttggtcaagctggctcttgcttgcccatg
ttttccaccatgccgttctcctactgcaacaaagctgcctgtcactactcggctcggaac
gacaaatcctactggctctccacaactgcagccatacccatgatgccgctctttggccac
gagatcagatcccacatcagccgctgtgtggtttgcgagacgcttttgcccgctgtggcc
tttcacagtcaggatccatcgattcccccgtgcccatctggctggaggagcctgtggacg
ggcttctccttcctccttcaaacaggggcaggtgacgagggcggcggtcagtctctgacg
tcctctggcagttgccttaaggatttccgaactcacccgatcattgagtgtcagggtgcg
cgaggggcgtgtcactacttcgccaacctctacagcttctggctgaccgcagtacgcccc
atagatcagtttgtcaagccgaggcccagtaccatcaaagctgccgatgaacaacgacgc
aaagccagtcagtgccaagtctgcctcagacagtag
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integrated database retrieval system
