Phycodurus eques (leafy seadragon): 133412626
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Entry
133412626 CDS
T09682
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-like
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133412626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133412626
03019 Messenger RNA biogenesis [BR:
pee03019
]
133412626
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133412626
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133412626
U7-dependent histone pre-mRNA processing factors
133412626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
133412626
NCBI-ProteinID:
XP_061552087
LinkDB
All DBs
Position
14:complement(10320028..10333528)
Genome browser
AA seq
700 aa
AA seq
DB search
MASKRKVEVAVPAEESDQLHIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPSVKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRE
GRCLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKAININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLQLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMGRLKAALIREYEDNDEVHIEVHNPRNTESVTLNFRGEKLAKVMGSLADQ
KCVQGQRVSGILVKKNFNYHILNPSDLSLYTELSMSTVKQTQAIPFTGPYSLLVCHLRNL
TGDVEELDGTEKKTLRIFQNITLIHEVGMVVLEWIANPLNDMYADAVTTVVLEVQSNPKA
QKVMETQSSILDMDVFQSRLEVMLQDMFGQDYVDISDGQNISVTVDGKTVNICLETRSVS
YEDESTEDDSLRELVEQAVLRLFDALNPITSLTPSVLKAL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaacgcaaagtggaggtggccgtcccggcagaggagagtgaccagcttcat
attcgtccgctgggtgctgggcaggaggttgggaggtcttgtattatcctggagttcaaa
ggaaggaaaattatgctggactgtggcattcaccctggcttggagggaatggatgccctc
ccctacatagacttgatcgacccagcggagattgacctgctgctcatcagccacttccac
cttgatcactgtggggctctgccttggttcctccagaagaccagcttcaaaggcagaacc
ttcatgacccatgccaccaaggccatataccgctggctcctgtcggactacgtcaaagtc
agcaacatttctgcagacgacatgctatacactgaaacggacctggaggagagcatggat
aagattgagacaattaactttcatgaggtcaaggaggtggcagggatcaagttctggtgc
taccacgccggccatgtactgggggctgccatgtttatgattgaaatagccggggtcaag
ttgctgtacacaggagacttctcacgccaggaagacaggcacctcatggcggctgagatt
cccagcgtcaaaccggacatcttaattattgaatccacatacggcacgcacatccatgag
aagcgcgaggagcgcgaggctcgcttttgtaacacggtccacgacattgtcaacagagag
ggtcgctgtttgattcccgttttcgctttggggcgagcccaggaactgctgctcatcctg
gacgagtactggcagaaccacccggagctccacgacatccccatctactatgcctcgtcc
ttggccaagaagtgcatggccgtgtaccagacctacgtcaacgccatgaatgacaagatc
cgcaaggccatcaacattaacaacccttttgtcttcaagcacatcagcaacctcaagagc
atggaccactttgacgacattggccctagtgtggtgatggcgtcccctggcatgatgcag
agtggcctctccagggagctctttgaaagctggtgcacggacaagaggaatggagtcatc
atcgctggatactgtgtagagggaacacttgccaagcacatcatgtccgagccagaggag
atcaccaccatgtcgggacagaagctacagttgaaaatgtcggtggactacatctccttc
tcggcccacacagactaccagcagaccagcgagttcatccgcgctctcaaacccccacac
gtgatcttggtccacggcgagcagaacgagatgggacgtctgaaggcggcgctgatccga
gagtacgaggacaacgacgaggttcacatcgaagttcacaacccgcgcaacacagagtct
gtcaccctcaacttcagaggagagaaactggccaaggtgatgggctctctagcggatcag
aagtgtgttcagggtcagagggtgtcaggtatcctggtgaagaagaacttcaactaccac
atcctcaacccctcagacctttcactgtatacagagctgtccatgagcacagtgaagcag
acccaagccatccctttcactggaccatattcgctgctcgtctgccaccttaggaacctc
acaggtgatgtggaggagctggacgggacagaaaagaaaaccctgaggatcttccaaaac
atcactctgatccacgaagtcggcatggttgtgctggagtggatcgctaaccctctcaac
gacatgtacgccgatgccgtcaccactgtggtgctggaggtccagtccaatccaaaggct
caaaaagtcatggagacccagagttccattttggacatggacgtctttcaaagccgacta
gaagtcatgttacaggacatgtttggccaggactacgtggacatcagtgatggccaaaac
atctcagtgacggtcgatggcaagacggtgaacatttgcttggaaacacggtcggtgagc
tacgaggacgagagcacagaggacgattccctgagggagctggtggagcaggctgtgctg
cgcctctttgacgccctcaaccccatcacatcactcacgccatcagtactcaaagcgctt
taa
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