Phycodurus eques (leafy seadragon): 133412795
Help
Entry
133412795 CDS
T09682
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133412795 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pee03000
]
133412795 (arid1b)
03021 Transcription machinery [BR:
pee03021
]
133412795 (arid1b)
03036 Chromosome and associated proteins [BR:
pee03036
]
133412795 (arid1b)
Transcription factors [BR:
pee03000
]
Eukaryotic type
Helix-turn-helix
ARID
133412795 (arid1b)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133412795 (arid1b)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133412795 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
133412795
NCBI-ProteinID:
XP_061552419
LinkDB
All DBs
Position
14:14805743..15006079
Genome browser
AA seq
2199 aa
AA seq
DB search
MAAQVASAPSRNNNKNKKLSSALGTELNSGKSGGGGGSVQQMLGAGDGTLNNHHRRTEPG
MVRSTSAGHGKDGNNLTSSNSNTSSMETGQIANHKLKCVGSGDPPQSQTPQPQFGQFAPH
PQRQMHSHNNGQGPRGAVDHHGGKENLVGSQVESQQQVQGKGEGHLTSTEGMMSSRYDHG
NLGPTSNNSEFNNNYYSRSFEQHGGQQQQQGMAISSAHNSMDNSHEAGYQNSQYNQYPPY
NRARYGAGTYGMMGPSGCRQPENMIMSSNSSTSHSKSTLGASSSGFQRFPGPTQQQHPSG
ATPTLNQLLTSPSPMMRGYGGAYQDYSASSAQQGLHGKDAGPQYGATTAHGWGGQPRNHP
HSISPGNGGQGLGRSQVSSMDFMAMKRSQLYGMANNPYSGPQQPGGGPYPPSQPYTPPPS
HRYPMSMQARSQMGMGSMQFPQQQVAPYSQQGMAGYSQHQQASQQGTPPYFSPPQQTPPG
PNQSPYLQSRPLPQEAQQENYNTRGPGAGNSGKSNNEDGVSSQHRPSSLPDLSGSIDDLP
TGTEAGLGSAVNSSSNQGEQAGASTQRQSPFSPHASPHLHSQRSGPSPSPVGSPAGSTQS
QQSRSGSGPISPASGPPAGANTPGSTSNPQSSGNGPDGSRPPITHSPMAQERGFMSNMPR
NQAGSQFPLYPAMGPYCQSGPTGPYGPQETQYGHQGNYPRPSNYSGTTSVNYSGPGAGMS
NSLAMKASSPMHGHGPGQPLPGGRNPGLGNHNRGYPTVAPSSPSMPQPAGPGMGPPSLGT
SNHKTQEAAGSTMPGAINATNIRQGSYQGPSVSQASTVIPYSRPAGNNVSAMVNVQGPAY
NVMPSEMIEAYKNSSTGSSKSLERTLNDHGFIGMSGDGMMSPDVKVKTDVKDDNDPANDT
HKPKSQDGHSNSTTGPQQCVSQPATPSSALPVPSPLSPSPASLSSYHGDDSDSISSPPWP
VKAPPSPKANPNSSSSSGDRILRLYELGLEPERRLWVERYLSFMEVRGTPVSQLPIVGKK
PLDLWKLYIAVREIGGLAMVNKNKKWRELSTTLSVGTSSNSASSLKKHYIQYLFAYECKM
ERGEEPPADSSSSSGSVTAGDSRKQVKIQPPSPANSGGSLQGPQTPQSSGSSSTVEGAGD
LLPPTRATTPPGQATPVHQNRSSVSVQDPFSEVSDPAFQKRAASLPPSAPYQQGLGMPDM
MMRMQYDAKDPFAGMRKMAGADPYMPGQMPPGGVQDLYGRPPTALSMSQRSQYYGYDRRP
DHLMGMEGSMGPPGSQNSMAPHSEGSVYSPSRYPSHQRHDGYSPQYPGMPYGMHPSGMYQ
QQQQSYKRSMDGVYGPPPKRHESDMYGLQYSNQQADMYNQYGGGYSGPDHRPIQGQFPYP
YPRDRMGSSMPSQHGMMGGVPPPNHNIDGPNMWPSRTDLGYPYPNRQGHPSQMPAYGSIG
REDMDGRPGQDQWHRQSPYMSSSVGMPPFSSRHPPSSYSNSQSMANHPPRAPSPGAFQRS
LDSRVSPSKAAFLSAMKMSKPGMSMMGSQGCGPLGQFPHSLRRDLNYPPGSVEGTMPILR
PQRKLTNKDTGMPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVASFNLSQLPGFLE
LIVEYFRRCLIEIFGILQEFEVRTVTKEILLDLSSHQKKETILDDETEIAVQSTSDSVPI
LVAAEELPQNTMKEYLPVIGEPLSTDVKKKPDQCFKKDEDDKDMKAESKNECDVELPVAE
VEPKPKQASKYDKFPITIVDLSEDITDHLVDEFTSGLLHWQAGGGDTTAHIQTYFEPRSG
TPTRVEDKMLNPNQDDDGKEQTGKRITATIDDVLCARVDALSNAHPARSLPSYPFRVHPD
GEQDHITLLEDEPRCLDETPLTTRSAWQDSLAKRCLCISNIVRGLSFIPGNDSDMSRHPA
LVLLLGRLLLLHHQHPERTRSRPSYQRDEQQDMGLSSSQSEWWWECLSQLRENAMVTLAN
ISGQLDLSTYADTICLPILDGLLHWMVCPSAEAQEPFPSAAAYSQLTPQRLVLECLCKLS
IQEGNVDLLLATPPFSRQEKLFTVLVRYVGQRKAQVYREMAVAITSHLAQGDPTAARVIA
MQKGSVGNLVAFLEDGVTMAQYQHNPHSLLHMGHPHMDPPSVSMLCRAAKGLLAMAKVGE
NKTEFVLYESRLLDISISSVLNAGVVAIICQVLFHLGKL
NT seq
6600 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcggctccctccagaaataacaacaaaaacaagaaattatcc
agcgccttgggcacggagctcaattcggggaaatccggcggaggaggaggaagtgtacag
cagatgctgggcgccggagatgggactctgaataatcatcaccgccgaacggagcccggc
atggtgcgttcaacttccgcgggtcacggcaaggatgggaataacctcacatcgtctaat
tcaaacacttcctcaatggaaacgggacagatcgccaaccataagctgaaatgtgtcggg
agcggagaccccccgcagtcccagacaccgcagccgcaattcggccagtttgcgccacat
ccgcagcgtcagatgcacagccacaacaacggacagggaccccgaggggctgtggaccac
cacggcggtaaagagaaccttgtggggagtcaagtggagtcgcaacagcaggtgcagggt
aaaggtgagggacatcttacatccacagaggggatgatgtcttcaaggtacgatcacggc
aacttggggccaaccagcaacaactcagagttcaacaacaactattactcaaggtctttt
gagcaacatggcggacagcagcagcagcaagggatggcgatatcatctgcacataacagc
atggacaactcccacgaagcaggctaccagaacagccagtacaaccagtaccctccctat
aatcgggcacggtacggcgctgggacctacggcatgatgggcccctctgggtgcaggcaa
cctgaaaacatgatcatgagcagcaactcctcgacaagccacagcaagtccactttggga
gcctcttccagtggcttccaaaggttcccgggaccaacgcagcagcagcatccctcaggg
gccaccccgaccctcaaccagctgctcacgtcaccgagccccatgatgcggggctacggt
ggggcctaccaagactacagtgcgtcgtcggcgcagcagggtctgcatgggaaagatgcg
ggccctcagtatggagccaccacggcccacggctggggagggcagcccaggaaccatccg
cattcaattagtccaggcaatggagggcaaggccttgggagaagtcaggtgtcctccatg
gacttcatggcgatgaagcgttcgcagctttatggtatggccaataatccgtactcgggc
ccacagcagccagggggcgggccttaccctcctagccagccgtatactccgcctccctca
caccgttatccaatgagcatgcaggcaagaagtcaaatgggcatgggcagcatgcagttt
cctcagcagcaggtggcgccctacagccagcaggggatggcaggctatagccagcaccag
caggcgagccagcagggaactccgccctatttcagtcccccacaacaaacacccccaggt
cccaaccagagcccctacctgcagtcacgaccactgcctcaggaggcacagcaagagaat
tacaacaccagaggtcccggcgcaggaaattctgggaagagcaacaatgaggatggcgtc
tcctctcagcaccgcccttccagtctgccggatctgtctggctcgatagatgacctcccc
actgggacagaggctggtctgggatcagctgtcaacagcagtagtaaccaaggagagcaa
gcaggcgccagtacccagcgacagtctcctttctctcctcacgcctcgccacaccttcac
agtcagaggagcggaccttcaccctcccctgtgggctcacctgcaggctccactcagtcc
caacagtcgcgttcaggctctgggcccatctcccccgccagcggcccccctgctggtgcc
aacacaccaggctccacgtcaaacccacagagctctgggaatggaccggatggatcccgc
ccaccaattacgcactcacctatggctcaggagcgagggttcatgtccaacatgccaagg
aaccaggctggctctcagttcccattgtatcccgcaatgggtccctactgccaaagtggt
cccacaggcccttacggtcctcaagaaacccaatatggacaccaagggaactaccctcgg
ccatccaactatagtgggactacaagtgtcaactacagcggccctggcgcaggcatgagc
aacagcctggccatgaaagcaagcagccctatgcacggccatggccctggtcaacctctt
cccggaggccgcaatccagggctgggaaaccacaacagagggtaccccaccgtggcaccc
agttctcccagcatgcctcagccagcaggaccgggaatgggccctccctctttgggtacg
tctaaccacaagacacaggaggcagcgggatccaccatgccaggcgcaatcaacgcaaca
aacatcaggcagggcagctaccaaggacctagcgtcagccaagcaagcaccgtaatcccc
tacagtcggccagcaggcaacaatgtttcagccatggtcaacgtacaaggtccagcctac
aatgtgatgccatcagaaatgattgaagcatacaaaaacagcagcaccggcagcagcaaa
tcacttgagagaacattgaacgatcatggattcattggaatgtctggagacggcatgatg
agcccagatgtgaaagtgaaaacagatgtaaaagatgacaatgaccccgccaatgacact
cacaagccaaagtcacaagacggtcacagcaacagcaccaccggcccccagcagtgtgtg
tcacagccggccacgccaagcagtgctctgcccgtcccttccccactatcacccagccca
gccagtttgtcctcctaccacggagatgatagcgacagcataagcagccctccttggcct
gtcaaggcacctccaagcccaaaagccaacccaaactcgtcatcgtccagtggtgatcga
atcttgcgactatacgaactgggtttggagccagagaggcggctctgggtggagcgctat
ctctccttcatggaggtgagaggaactcctgtttcccagttgcctattgtggggaagaag
cctctggatctctggaagctctacattgctgttcgggagattggaggccttgccatggta
aataagaacaagaagtggcgcgagctctccaccacactgagcgtgggaacatcgagcaac
tcggccagctcgcttaagaagcactatatccagtacctgtttgcctatgagtgcaaaatg
gagcgaggtgaagagccaccagcagacagcagcagcagtagtggaagcgtgactgcaggg
gacagcaggaaacaggtcaagatccagcctccctcacctgcgaactcaggcggctccctc
caaggtccacagacaccccaatcttcaggcagcagctccactgtggaaggtgcaggggac
ctcttaccccccacccgtgccaccacccctcctggacaggccacacctgtgcatcaaaac
aggagcagcgtgagtgtgcaggatcccttctcagaggtcagcgacccagccttccagaag
cgtgctgcctctctgccaccctctgctccataccagcagggcctcggcatgccagacatg
atgatgcggatgcaatatgatgccaaggaccccttcgctggcatgaggaagatggcaggt
gctgatccctacatgcctggccagatgccgcctggaggtgtgcaggacttgtacggacgg
cccccaacagcccttagcatgagtcaacgctcacagtactatggctatgacaggagaccg
gaccacttgatggggatggagggaagcatgggtccccctggtagtcagaacagcatggca
cctcacagtgagggtagcgtgtattctcccagcagatacccttcacatcagagacatgat
ggctacagtccgcagtatcctggcatgccatacgggatgcatccttctggcatgtaccag
cagcaacagcagagctacaaacggtccatggacggtgtgtatggtcctccacccaagagg
catgagagtgacatgtatggtttgcagtattccaaccagcaggcagacatgtataaccag
tatggcgggggttattcaggcccagatcacagacccatccaaggacagttcccttacccc
tacccccgcgatcgtatgggttcttcaatgccaagccagcatggaatgatgggtggggta
cctcctcctaaccacaacattgatggtcccaacatgtggccatccaggacagacctcggt
tatccctatcccaatcgacaaggacatccatcccaaatgcccgcttatggttcgattggc
agagaagacatggatgggcggccggggcaggatcaatggcatcggcagtctccttatatg
tcatcatcagtcggtatgccgcccttttcatcgcgccacccgccttcatcttactccaat
tcacaatccatggcaaaccacccacctagagcccccagtccaggagctttccagcgttcc
ttggactctcgtgtgtcacctagcaaagcagctttcctatcagccatgaagatgtcaaag
cctgggatgtccatgatgggctctcagggatgtgggcctctgggtcagtttccccacagc
ctgagaagggacctcaactacccaccaggatcagtggagggtaccatgccaattctccgg
cctcaacgcaagcttaccaacaaggacacaggaatgcctgaggcctggcgtgtgatgatg
tctctcaaatctgggctcctagcagagagcacatgggctcttgacactatcaacattctg
ctttatgatgacagcactgttgcttcatttaacctctcccagttgccaggcttcctggag
ctcattgtcgagtacttccgccgttgcttgattgagatctttggcatcctgcaagagttt
gaagtaaggacggtgactaaggaaatcttgttggacctctcctcccaccagaagaaagaa
accatcttggacgatgaaaccgaaattgcggtccaatccacatctgattccgtcccaatt
ctggtggcggcagaggaactaccacaaaatacgatgaaggaatatcttcctgttattgga
gagcctctctcaactgatgtgaagaaaaaacctgatcagtgctttaaaaaagatgaagat
gacaaagacatgaaagcggagagtaaaaatgagtgtgatgtagagctgcctgttgctgaa
gtggaaccaaaacctaaacaagctagcaaatatgataagttccccataaccattgttgac
cttagtgaagacataacagatcacttggttgatgagttcaccagtgggctgctccactgg
caagctggtggaggcgacaccacggctcacattcagacatacttcgaaccccgcagtggg
acacctaccagggtggaggacaaaatgctcaacccaaaccaggatgacgacgggaaggaa
caaactggaaaacgtatcacggctaccatcgatgatgttttgtgcgcgcgggttgacgcc
ctctcgaacgcccaccctgctcgctcgctgccatcctaccctttcagggtgcatccagat
ggagaacaggaccacatcaccttgctggaggatgaaccacgctgcctggatgaaaccccg
ctgaccacaagatcagcctggcaggactcattggccaaacgctgcctctgcatctccaac
attgtccgtggcttgtccttcatcccagggaacgactcggatatgtcgcgacatcctgct
ctggttcttcttctgggcaggctcctcctgctgcaccaccaacaccctgagaggaccagg
tcgcgccccagctatcaaagagatgaacagcaggacatggggctttcaagcagtcaatcc
gagtggtggtgggagtgtctgagtcagctcagagagaatgcaatggtaactctggctaat
atctcaggccagctggatctctccacttatgccgacaccatctgcctccccatcttggat
ggcctcctccactggatggtgtgcccttcagccgaagcccaggaacccttcccttcggca
gcggcctactcccagctcactcctcagagactggttctggagtgcctttgcaagctgagc
atccaggaaggtaatgtggatctcctccttgccacaccacctttcagtcgacaagagaaa
ctcttcacggtgctggtccgctatgtaggtcagcggaaggcccaagtgtacagggagatg
gcggtggccatcacctcccacctggcacaaggagacccaaccgcggcacgtgtcatagcc
atgcagaaaggcagcgtgggtaatttggtagcctttttagaggatggcgtcaccatggca
cagtaccagcataaccctcacagcttattgcacatggggcacccccacatggatccacct
agcgtgagcatgttgtgtagagcagctaaaggccttctggccatggccaaagtgggggag
aacaagacagagtttgtgctctatgaaagcagattgttagacatttccatttcttccgtg
cttaacgctggagttgtggcgattatttgccaggttctctttcacttggggaagttatga
DBGET
integrated database retrieval system
