Phycodurus eques (leafy seadragon): 133412851
Help
Entry
133412851 CDS
T09682
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133412851 (scaf8)
03041 Spliceosome [BR:
pee03041
]
133412851 (scaf8)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133412851 (scaf8)
Spliceosome [BR:
pee03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133412851 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
133412851
NCBI-ProteinID:
XP_061552522
LinkDB
All DBs
Position
14:complement(15805826..15868673)
Genome browser
AA seq
1346 aa
AA seq
DB search
MEAVKAFNNELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIIATFQHLYRCPSDDKSKIVRVLNLWQKN
AVFKSDIIQPLLDMAAGILPPSVTPVMSSSAAPVNNTTPGTPATPATPANIVQGLPDWAS
QITNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAATANSLNPLEQRVSSFNKKLLGQFDFGNDSERGEESKKETSSSQLPMVSEPINSSLF
HQLAEQLQQQNLEQFQKQLLEHQQKAMSIDGQDTLFGQENSVITAQGSSQPQLPEPETKM
DDSIDNQQQDMDLDEGPDGMEEDNFEAEDKKTATTRSRTRSRSRSRSPKRRRSRSRSGSR
KRKHRKRSRSRSRDRKRKTSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQ
VDKKASQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRARQKLSTGSCKIGSKI
IKIAWALNKGVRQEYKQFWDVDLGVTYIPWEKVKVDDLDGFAEGGIIDQETVNDEWDTAK
NSEATKDAISQPLSTETTAASNSQSESYNQQVTMMPVQLPVAQAVPGPVGLVPPNFPVSM
SIPPPGYGPPPPFLRPSFNASQPPPGFLQAAQTAAMATAPASLVRPPVATSQETVKEIPF
SSMIPTTNSMPRGFMSSAVPGPNVFNAVGVQSQHSSDKMPPSAKCLDGTQELTLQGMHNA
NRSGMGLLGMQPTASLGHPLHQPGMAGQRMPGMLPLDVRPNLLQPGAGARFPLLLQQGPG
QQAGGLLDGSLQAQAHVRPPFSQLDPFHRPPHQANDNVSKTEESSSGADEGKDQDYRFPP
VDKQSTGLLRTPPPEHRAPLGGVGAGGRPPLLQTPGAQPARGTLLGRLQALAGFTPDNHW
NQSRGDFDERDGMDRPNQGQHFPNRFDSRPGNAASKNVGGPQPWNRGGGGATPFESDLDE
RRSQWDRQRDRDERDFDFRREMNGNRQGRERDRERERGRDRPREHDKDREKERERERGNW
TPVLPLPTPLLPTPPLNPVLNLNQGKLLTPLKLNTPIQSRFHSPLLSQAQAKVPQLGQQP
PPAPFQLAEPKMSSQTAEVEPQRNIASLPETPQSQSPPSAQLDNKAQSQLPSSPAEAPSS
TQPETTLLSESHHQASDQACPQTTRSSDTPSQASPVGLTQVVSPPEEMRYSLEEHLSPQE
ETEEVLQEKAPSPKAQWLNGAEMDKSTVFKPTPDVSPEPTKSALLESEAKQEQAAPPQDV
DIVQSEAVEEAASDPVLDTDTHTEGT
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaagccttcaacaacgagttgtactcgctgaatgagtacaagccaccc
atctcgaaggccaagatgacccaaatcaccaagtcaggcatcaaggccatcaaattctac
aagcatgttgtccagagtgtggagaagttcatacaaaagtgcaaaccagaatacaaggtc
cctggattgtatgttatcgactcaattgtgaggcagtcacgtcaccaatttggcacagag
aaagatgtgtttgccccacgcttcagcaagaatatcatcgcaacattccagcatctctac
cgttgcccctccgatgacaagagtaagatagtgcgggtcctgaacctttggcaaaaaaat
gctgtcttcaagagtgacatcatccagcctttgttggacatggctgcagggattcttcct
ccgagcgttactcccgtcatgtccagcagtgctgcccctgtcaataacaccacacctggc
actccagccaccccagctaccccggccaacatcgttcagggactgccggactgggcttcc
cagattaccaacacagacactgtggcagctgtggcgcaaatcttacaaagtcctcagggg
caacagcttcagcagcttgtacaaagcctgcaaatgcagcaacaaaagcctcagccctca
ctgcttcaggccttggatgctggtctggttgtacagctgcaagctctgaccgctcaactc
actgcagctgcgactgctaacagcctcaaccccctggaacagagggtctcctcttttaac
aagaaactcttagggcagtttgactttgggaatgactctgagcgtggtgaagaatccaag
aaggaaacatcatcctctcagctgcctatggtgtcagagcccatcaacagctcactgttc
caccagcttgcagagcagctgcagcagcagaacctggagcagtttcagaagcaactgctg
gagcaccagcaaaaggctatgagcatagatggacaggacactctatttggacaggagaac
tctgttataactgctcagggtagcagtcagccgcagcttcctgagccagagaccaagatg
gacgactccatagacaaccagcaacaggacatggatcttgatgagggcccggatggaatg
gaagaggataacttcgaggcagaggacaaaaagacagctacgacccgctccagaacacgc
tcaaggtcacgttctcggtctcccaaaaggagaaggtccaggtcccgatctggctcccgg
aagcgcaagcatcgtaagcggtcgcgctcacgctccagagatcgtaagaggaagacgtca
cgatcgtactcaagtgaaagacgtgcccgagagcgagaaaaggagcgacagaagaaagga
ctgcctcctatacgatctaagactcttagtgtgtgcagcacaacgctttgggttggccag
gtggacaaaaaggcttctcagcaagacctcacaaacctgtttgaagagtttggacagata
gagtctataaatatgatccctccaagaggctgtgcctacatctgtatggttcacagacag
gatgcctaccgtgcacgccagaagctcagcacaggttcctgcaagattggctccaagatc
atcaagattgcttgggccttaaacaaaggagtaagacaagagtacaagcagttttgggat
gtggaccttggagtcacctacataccttgggaaaaagttaaagtggatgacttggatggt
tttgctgaaggaggaatcattgatcaggagactgtcaatgatgagtgggacacagctaag
aattcagaggcaaccaaggatgctataagccaaccactaagcactgagacaacagcagca
tcgaacagccagagtgaaagctacaaccagcaggtcaccatgatgcccgtgcagctacca
gtggcccaggctgttcctggtccagtaggcttggtgccccctaactttcctgtcagtatg
agcattcccccgccaggttatggaccaccaccaccgttcctaaggcccagcttcaatgcc
tcacaaccacctccaggttttttgcaggcagcacagactgcagccatggccacagcacca
gcttctctagtgcggcctccagtggctaccagccaggaaacagtgaaggaaatacctttc
agctctatgatcccgacaaccaactctatgcctcgtggcttcatgtcctccgctgtccct
ggacccaatgtgtttaatgcggtgggagttcaaagtcagcactcgagtgacaaaatgcca
ccttctgctaagtgtttggatgggacacaggagctcactcttcaaggtatgcataatgca
aatcgcagcggaatgggcctccttgggatgcaacccacagcctcccttggccacccactt
caccagcctggaatggcgggacaaagaatgcctggaatgctgccgctcgacgtgcgtcct
aacctccttcagcccggggctggtgctcgcttccctctcctcctgcagcagggacccggc
cagcaggctggtgggcttcttgacggctcccttcaggctcaagcccatgtcaggcccccc
ttctctcaactagacccctttcacaggccccctcatcaggccaatgataatgtgtccaag
acagaagagtcttcttcaggggctgacgagggtaaagaccaggactaccgcttcccccca
gtggacaagcagagtacaggtctgctgagaacacctccacccgagcatcgggcgcccctt
ggtggtgttggggcaggaggcaggcccccattgctacaaacaccaggagctcagccagcc
agaggcactctgctcggacgtctgcaggctctcgccggctttacccctgataatcactgg
aaccagtcgaggggggactttgatgaacgtgacggaatggatcgccccaaccaagggcag
cacttccctaatcgctttgacagccgtcccggaaatgcagcttccaaaaatgtcggtggg
cctcagccgtggaaccgtggcggtggcggcgcaaccccttttgaaagtgacctagatgaa
cgacgatcccagtgggacaggcaaagggacagagatgaaagagattttgacttcaggaga
gaaatgaatggaaaccgtcaaggccgtgagcgggatcgagagagggagcgagggcgagac
cgtccccgggagcacgacaaagaccgtgaaaaagaacgagagcgggaacgtggcaactgg
acgcctgttctccctctaccaacgccacttcttcctacaccacctctcaaccccgttctg
aacctgaatcaagggaagctgctcaccccgctaaaattgaacacacccattcagtcacga
ttccactctcccctgctgtctcaagctcaggccaaagtgcctcagttaggtcagcaaccc
ccaccggctccttttcagttagcagagccaaaaatgtccagccaaacagcagaggtggaa
ccacagaggaacatcgcttctttgcccgagacccctcaatcacaatccccaccttcagcc
caacttgacaacaaggctcagagccaattgcccagttcacccgctgaggccccatcatca
acgcagccagagaccactctactctctgaatcacaccaccaagcctcagaccaggcctgt
ccccagacgaccaggtcctcagacactccgagccaggcctctcctgtgggcctcacgcaa
gttgtcagcccccctgaagagatgaggtactctctggaggagcacctaagcccacaggag
gagactgaggaggtcttacaagagaaagccccttctccaaaggcgcagtggctcaatgga
gctgagatggacaaaagcacagtgttcaagcccacgccggacgtgtctcctgagcccacc
aagtctgcgcttcttgagagtgaagccaagcaggagcaggccgcgcctcctcaggacgta
gacattgtacagagtgaggccgtggaggaagctgcgagtgacccagtgctagacactgac
acacacactgaggggacataa
DBGET
integrated database retrieval system
