Entry |
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Symbol |
pnn
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Name |
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KO |
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Organism |
pee Phycodurus eques (leafy seadragon)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pee00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133412978 (pnn)
03015 mRNA surveillance pathway
133412978 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pee03019]
133412978 (pnn)
03041 Spliceosome [BR:pee03041]
133412978 (pnn)
Messenger RNA biogenesis [BR:pee03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133412978 (pnn)
Spliceosome [BR:pee03041]
Complex C
Other components
EJC/TREX
133412978 (pnn)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
14:complement(19984703..19992897)
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AA seq |
681 aa
MAVAVRSLQDQIEKAKQSLKNVDDNIRKLTGRDPNESRPGQLRRFGGPMAGVAVAAVGGG
GRGRGFNLLRRSLSDIGGGGPPAKQRDIDGALLRLAGDQRARRDVRHDSDAEDDDDVKKP
ALQSSVVATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVCTEKQKRR
SEIEQKLEVQAEVEKKKLESEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNHLV
KFIRTKTRPHIFYLPGKMCSATQKLLDDSTKKLNAMFEERREAFTEHINKMESRPRRQLN
RDQDGNSATTGKDHSAEGKPAGQVDKVTGNKRAVVMEEEEEEEEEEDQEEKGADGEQEEA
SKVTEKVEVEEGDSREGLNEDEGMAFEEVGNGEKEGEKREICGGKDEAAPGSEVQVGKEQ
GNGNKMEQDDDSKEGPSDLETEKTEITSPSKPTVSQQEASSSAQLSPNTTHTPEEPAALL
AEPQIASPASTSEMAANTPGQEHAVPSSEVQDSSSQKPAEQTQSGDESAVKPQRDAQSGP
AALLKEQKYGARGRKKAKESKKSHGQSRSSSSSTSGSSSSGSSSSSSGSSRSSSSSSSSS
SSSSSRSRSRDNEKRSRRPSGRDRKKEEKSHRKKGGNSGGGGGRDAKGSKEGRKRRSNEG
RSRSSRSNRENKDRDRKDKRR |
NT seq |
2046 nt +upstreamnt +downstreamnt
atggcggtggcagtgcggagcttgcaagaccagatcgaaaaagccaaacaaagcttgaaa
aatgttgacgataatattcgtaaattgactggacgagatcctaatgaatccagaccgggc
cagctgcgccggttcggtgggcccatggcaggcgttgctgttgcagcagtgggaggagga
ggtagaggaagaggatttaacctgctcagacgcagtctctctgacatcggaggcggcggc
ccccctgccaagcagagggacatagacggagctctgttaaggctggcaggcgaccagagg
gccaggagagacgtgcgtcacgacagcgacgccgaggatgacgatgatgtcaaaaagccg
gcgttgcagtcgtctgttgtagctacctccaaagagagaacacgccgggacctcattcaa
gatcagaccatggatgagaagggaaaacagaggaatcggcgtatgtttggcctgctcatg
gggaccctgcaaaaatttaaacaggagtctaatgtttgtacagagaagcaaaagcggcgc
tccgagatcgagcagaagctcgaggttcaagctgaggttgagaaaaagaagttggagagc
gagaagagggagttgtttgaagagaggagagccaaacagactgagctgagactactcgaa
cagaaagtagaattggctcagttgcaagaggagtggaccagccacaataaccatctggtg
aaattcattcgcactaagaccaggccgcacatcttctacctccctgggaagatgtgctct
gccactcagaaacttctcgatgactccaccaagaaactaaatgctatgtttgaagagcgg
cgtgaagcattcacggaacacatcaacaagatggagtctcgaccacggcgacagctaaac
cgcgaccaggacggcaactctgcgacgacagggaaggaccactcggcggagggtaagcca
gcaggtcaggtagacaaggtgacaggtaacaagagagctgtagtgatggaggaagaggag
gaagaggaggaggaggaggatcaggaagagaagggggcagatggagaacaggaagaggct
agcaaggtcacagagaaagtagaggtagaggaaggggatagtagggaagggttaaatgag
gatgaggggatggcatttgaggaagtggggaatggggagaaggaaggggagaagagagag
atctgtggaggaaaggatgaggcagctccagggtcagaggtgcaggtaggcaaagagcag
gggaacgggaataagatggagcaggatgatgacagtaaagaggggccctcagaccttgaa
actgaaaagactgagatcacgtctccatccaaaccaacggtgagccagcaagaggcgtct
agcagcgctcagctcagccccaacaccacccacaccccggaggaaccagcagccttgttg
gctgagccccagatagcctctcccgcctcaacatctgaaatggctgccaacacaccaggc
caggagcatgcagttccttcctctgaggtccaggattccagcagtcagaagccagctgag
caaacgcaatctggggatgaatcggctgtgaagcctcaacgtgatgcccagagtggcccc
gctgcacttttgaaggaacagaaatatggcgcaagggggaggaaaaaggcgaaggagtcg
aaaaaaagccacggtcaaagtcgcagctcttcttcctccacctccgggtcctcctccagc
ggaagctcttcgtcttcttccggttcgagccgctcatcctcatcatcctcctcgtcatcc
tcctcgtccagcagccgaagtcgcagtcgggacaacgagaagcgcagcaggaggccgtca
ggcagggacaggaagaaagaagagaagagtcatcgcaagaaaggtgggaatagtggaggt
ggaggaggcagggatgccaaaggctccaaggaagggaggaagagaaggagcaatgaaggc
aggagcaggtcatctcggagcaatagggagaataaagatagggataggaaggataaaaga
cgctaa |