Phycodurus eques (leafy seadragon): 133413094
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Entry
133413094 CDS
T09682
Symbol
vps39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04140
Autophagy - animal
pee04148
Efferocytosis
pee05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133413094 (vps39)
04148 Efferocytosis
133413094 (vps39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133413094 (vps39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pee04131
]
133413094 (vps39)
Membrane trafficking [BR:
pee04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
133413094 (vps39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
WD40_like
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
133413094
NCBI-ProteinID:
XP_061553000
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Position
14:complement(5412578..5428623)
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AA seq
875 aa
AA seq
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MHDAYEPVPILEKLPLQIDCMAAWEDWLLVGTKPGHLLLYQIKKDAATNHFEVTLEKSNK
NFSKKIQQLYVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLFVCDLQQSSSGE
ETLRMCVAVKKKLQMYYWKDRDFHELQGDFGTPDIPKSMAWCENSICVGFKRDYYLIRLD
GRGTIKELFPTGKQLEPLVTPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPIAME
HQPPYIIAVLPRYVEIRTLEPRLLVQSVELQRPRFITSAGPNVVYVASNHFVWRLVPVSI
ATQIRQLLEDKQFELALQLAKMKDDSDGDKKQQIHHIQNLYAFNLFCQKRFDDSMQVFAK
LGTDPTHVIGLYPDLLPSDYRRQLHYPNPLPALSGAELEKAHLALIDYLTQKRSHLVKQL
NDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES
EYILKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGVENLG
MIFEFAPWVLKMCPEDGLKIFTEDLTEVETLPRDKVLNFLKEGFKELAIPYLEHIIYVWD
DKGPEFHNTIIQLYLERVQSLMKQYLNSLPEGVAAVAAGTEKGELGEFRNKLLSFLDISS
SYEPARLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHSHYSSSVE
TDKDVYLSLLRMYLSPPDAHCLGPIKMELSEPQANLQAALQVLELHHSKLNTTKAINLLP
ANTQIREIRVFLESVLEEKAQRKRCNQVLKSLLQAEFLRVQEERIFHQQVKCVITEEKTC
RVCKKKIGNSAFARYSNGVVVHYFCCKDRNACPTE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgcttacgagccggtgccgattttggagaagcttcctctccagattgactgc
atggcggcctgggaggactggctgcttgtcggaaccaagccagggcatctccttttgtac
cagattaaaaaggatgcagccaccaaccactttgaagtcacgcttgagaaatccaacaag
aacttttccaagaagatccagcagctctacgttgtctcgcagtacaaaatactcgtcagt
cttctggagaacaacatccacgtccacgacctgctgacgttccagcagatcaccgtcgtg
tccaaagccaagggagccacgctctttgtatgcgacctgcagcaaagcagctcgggagag
gagacgcttagaatgtgcgtcgccgtgaaaaagaaacttcagatgtactactggaaggat
cgagatttccacgagctgcagggcgactttggcactccagatattccaaagtccatggcc
tggtgtgagaactccatttgtgttggcttcaaaagagactattacctcatccggctggac
gggcgcggcaccatcaaggagctctttcctaccggcaaacagctggagccgcttgtcacc
ccgctggccgacggcaaggtcgccgtcgggcaagacgacctcactgtggtgctgaatgag
gagggcatttgcacccagaagtgtgccctgaattggactgacatccctatagctatggag
caccagcctccgtacatcatcgcggtgcttcctcgctacgtggagatccggaccttggag
ccccggcttctggtgcagagcgtggagctgcagaggcctcgtttcatcacgtccgccgga
ccaaatgttgtgtacgtggccagcaaccattttgtgtggcgcctggtgcccgtgtccatc
gccacacagatccggcagctgctggaggacaagcagtttgagctggctcttcagctggca
aagatgaaagacgactcggacggtgacaagaaacagcagatccatcacatccagaacctg
tacgccttcaatctgttttgccagaagcgatttgacgactccatgcaggttttcgccaaa
ctgggcacagatcccacccacgtgatcggcctgtacccggacctgctgccatccgattac
cgcaggcagctgcactaccccaaccctctgccagcgctgtccggagcggagctagagaag
gctcacctggcactcatcgattacctcacccagaaacgcagccacctggtgaaacagctc
aacgactcggacccgtccaccacatcgccgctcatggagggcacgccaaccatcaagagc
cgcaagaagctgctgcagatcatcgacaccacgctgctgaagtgctacctgcacaccaac
gtggctttggtgtcacccctcctgcgcctggagaacaaccactgccacatcgaagagagc
gagtacatcttaaagaaggcgcacaagtacagcgagctcattattctctatgaaaagaaa
ggcctgcaccagaaagctctgcaagttctgctggaccagtccaccaaggccaactcccct
ctcaagggccacgaacgcaccgtgcagtaccttcagaggctgggagttgagaatctgggc
atgatctttgagttcgctccctgggtgttgaagatgtgtcccgaagatgggctgaagatc
ttcacagaggacctgaccgaggtggagacgttgccacgggacaaggtgctcaacttcctg
aaggagggcttcaaggagctggccatcccgtacttggagcacatcatctacgtgtgggac
gacaagggtcccgagtttcacaacaccatcattcagctctacctggaacgggttcaaagc
ctgatgaagcagtacctcaactcgctgccggaaggagttgcggctgtggcggcggggacg
gagaaaggtgagctgggagagttccggaacaagctgctgtcctttctggatatttccagc
agttacgagccagcgcgactcattagcgacttcccctttgatggtctgctggaggaacga
gcactgctcctgggacgcatgggaaagcatgagcaggcgcttttcatctatgtgcacatc
ctgaaggacacgcgcatggctgaggaatactgtcacagccattacagcagctctgtggaa
actgataaagacgtgtatctgtccctgctgaggatgtacctgtcccccccggacgcgcac
tgcctggggcccatcaagatggagctgtcggagccccaggccaacctccaggctgccctg
caggtcctggagctgcaccacagcaagctcaacaccaccaaggccatcaacctgctgccg
gccaacacacagatccgcgagatcagagtcttcctggagagcgtcctggaggagaaggct
cagaggaaacgctgcaaccaggtgctcaagagtctactgcaggcggagttcctcagggtg
caggaggagcgcatcttccaccagcaggtcaaatgtgtcatcacggaggagaagacgtgc
agagtgtgcaagaagaagatcggaaacagtgcgtttgccagatattccaacggcgtggtg
gtgcactacttctgctgcaaagaccgcaacgcatgtcccaccgaataa
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